The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RTB | 4996 | 2023-02-17 | 2019-05-22 | 3.46 | 3.57 | — | 3.5 | 0.009 | 1.23 | 0.0 | 0.07 | 15.08 | 0.01 | 2.122 | 6.27 | 2.61 | 18.9 | 80.9 | 0.2 | -4.64 | 0.62 | 0.79 | 4.22 | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 15.59 | 0.00 | 2.167 | 12.95 | 1.53 | 17.5 | 82.5 | 0.0 | -4.08 | 0.60 | 0.62 | 0.80 | 3.79 | 4681 | 699 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MLZ | 23914 | 2023-02-17 | 2021-04-29 | 3.71 | 4.27 | 3.83 | 3.9 | 0.004 | 0.78 | 0.0 | 0.05 | 12.84 | 0.01 | 2.150 | 18.13 | 0.00 | 17.4 | 82.5 | 0.2 | -4.08 | 0.80 | 0.62 | 1.39 | 3.9 | 0.003 | 0.77 | 0.0 | 0.05 | 15.31 | 0.00 | 2.004 | 16.26 | 0.37 | 15.1 | 84.7 | 0.2 | -4.07 | 0.55 | 0.81 | 0.64 | 1.17 | 4864 | 624 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6L1T | 0801 | 2023-02-18 | 2019-09-30 | 3.22 | 3.42 | — | 3.4 | 0.011 | 0.92 | 0.0 | 0.06 | 14.06 | 0.00 | 2.296 | 12.89 | 0.00 | 12.6 | 87.4 | 0.0 | -5.37 | 0.49 | 0.84 | 2.71 | 3.4 | 0.005 | 0.73 | 0.0 | 0.05 | 16.05 | 0.00 | 2.215 | 11.78 | 0.44 | 10.0 | 90.0 | 0.0 | -4.06 | 1.41 | 0.49 | 0.86 | 3.50 | 7010 | 1000 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BG9 | 16027 | 2023-02-16 | 2022-10-27 | 3.5 | 3.74 | 2.80 | 4.2 | 0.008 | 1.46 | 0.0 | 0.09 | 14.96 | 0.01 | 2.484 | 12.17 | 12.50 | 17.1 | 80.0 | 2.9 | -5.16 | 0.38 | 0.79 | 4.51 | 4.0 | 0.006 | 0.76 | 0.0 | 0.05 | 15.60 | 0.00 | 2.264 | 7.60 | 0.00 | 10.5 | 89.5 | 0.0 | -4.03 | 0.99 | 0.39 | 0.81 | 5.60 | 1692 | 222 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLo | 6729 | 2023-02-21 | 2017-05-11 | 3.8 | 3.91 | — | 3.9 | 0.009 | 1.37 | 0.0 | 0.06 | 14.03 | 0.01 | 2.050 | 13.55 | 0.29 | 17.3 | 81.9 | 0.8 | -6.02 | 0.58 | 0.64 | 0.55 | 3.9 | 0.004 | 0.89 | 0.0 | 0.04 | 17.39 | 0.01 | 2.066 | 20.20 | 0.88 | 15.6 | 84.1 | 0.3 | -4.03 | 1.62 | 0.62 | 0.67 | 0.65 | 15413 | 2073 | 9 | 38 | 0 | 0 | 0 | logfile |
✔ | 6M1D | 30041 | 2023-02-24 | 2020-02-25 | 4.5 | 6.53 | — | 4.6 | 0.005 | 1.20 | 0.0 | 0.06 | 18.16 | 0.01 | 2.043 | 20.63 | 9.51 | 9.3 | 89.8 | 0.9 | -5.09 | 0.69 | 0.76 | — | 4.6 | 0.005 | 1.04 | 0.0 | 0.05 | 14.90 | 0.01 | 0.441 | 31.91 | 0.00 | 11.3 | 88.3 | 0.4 | -4.03 | 0.67 | 0.68 | 0.70 | — | 21776 | 2706 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TD6 | 25824 | 2023-02-17 | 2021-12-30 | 3.0 | 3.41 | 3.09 | 3.4 | 0.002 | 0.57 | 0.0 | 0.05 | 16.47 | 0.00 | 2.449 | 7.94 | 0.00 | 0.0 | 100.0 | 0.0 | -3.11 | 0.42 | 0.76 | 2.95 | 3.4 | 0.005 | 0.89 | 0.0 | 0.05 | 18.65 | 0.00 | 2.234 | 13.38 | 3.53 | 9.9 | 90.1 | 0.0 | -4.01 | 1.10 | 0.43 | 0.78 | 3.81 | 5575 | 690 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2023-02-18 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.45 | 0.00 | 2.547 | 7.13 | 0.00 | 19.3 | 80.3 | 0.4 | -4.00 | 2.62 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RFP | 24444 | 2023-02-17 | 2021-07-14 | 4.4 | 4.57 | — | 4.3 | 0.014 | 2.06 | 8.0 | 0.12 | 7.12 | 0.01 | 1.581 | 3.60 | 8.00 | 9.5 | 87.5 | 3.0 | -1.46 | 0.68 | 0.61 | — | 4.3 | 0.004 | 0.92 | 0.0 | 0.04 | 7.02 | 0.00 | 2.177 | 9.44 | 0.00 | 14.9 | 84.6 | 0.5 | -3.98 | 1.49 | 0.80 | 0.75 | — | 5532 | 1114 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LNi | 0931 | 2023-02-17 | 2019-12-30 | 2.702 | 2.94 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 14.81 | 0.00 | 2.200 | 10.98 | 0.00 | 12.6 | 87.4 | 0.0 | -6.05 | 0.48 | 0.82 | 5.95 | 2.9 | 0.003 | 0.67 | 0.0 | 0.05 | 19.43 | 0.00 | 2.260 | 10.36 | 1.93 | 11.6 | 88.4 | 0.0 | -3.97 | 1.54 | 0.53 | 0.87 | 5.22 | 4920 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BW7 | 30229 | 2023-02-18 | 2020-04-13 | 4.1 | 4.55 | 4.28 | 4.4 | 0.008 | 1.06 | 0.0 | 0.06 | 16.20 | 0.01 | 2.050 | 40.13 | 0.00 | 23.4 | 76.6 | 0.0 | -5.62 | 0.73 | 0.67 | — | 4.4 | 0.003 | 0.79 | 0.0 | 0.05 | 15.12 | 0.00 | 2.151 | 18.52 | 0.00 | 13.1 | 86.9 | 0.0 | -3.97 | 0.75 | 0.70 | 0.62 | — | 8824 | 1091 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4A | 31705 | 2023-02-16 | 2021-08-12 | 3.2 | 3.19 | — | 3.3 | 0.002 | 0.52 | 0.0 | 0.05 | 14.28 | 0.00 | 2.423 | 8.54 | 0.00 | 7.9 | 92.1 | 0.0 | -5.80 | 0.42 | 0.82 | 3.23 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 16.38 | 0.00 | 2.347 | 6.77 | 0.61 | 11.8 | 88.2 | 0.0 | -3.97 | 1.70 | 0.42 | 0.81 | 3.13 | 1653 | 240 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PY2 | 13708 | 2023-02-16 | 2021-10-08 | 2.59 | 2.64 | 1.54 | 2.7 | 0.015 | 1.83 | 0.0 | 0.08 | 17.26 | 0.01 | 2.423 | 1.71 | 2.00 | 9.1 | 90.9 | 0.0 | -5.22 | 0.45 | 0.84 | 6.05 | 2.8 | 0.006 | 0.92 | 0.0 | 0.05 | 18.12 | 0.00 | 2.134 | 2.20 | 2.50 | 5.2 | 94.8 | 0.0 | -3.96 | 1.38 | 0.49 | 0.88 | 5.69 | 2152 | 316 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YYS | 6859 | 2023-02-24 | 2017-12-11 | 4.2 | 4.57 | — | 4.1 | 0.016 | 2.26 | 0.0 | 0.10 | 15.30 | 0.01 | 2.201 | 22.76 | 2.34 | 27.3 | 70.1 | 2.6 | -5.98 | 0.85 | 0.71 | — | 4.1 | 0.005 | 1.30 | 0.0 | 0.06 | 12.76 | 0.01 | 2.047 | 36.43 | 0.00 | 24.1 | 75.3 | 0.6 | -3.96 | 1.66 | 0.87 | 0.73 | — | 24044 | 3244 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Wi6 | 32526 | 2023-02-19 | 2022-01-03 | 3.71 | 4.33 | — | 4.2 | 0.009 | 1.02 | 0.0 | 0.06 | 14.53 | 0.01 | 2.290 | 5.63 | 1.54 | 14.5 | 85.5 | 0.0 | -6.21 | 0.76 | 0.78 | 1.96 | 4.2 | 0.005 | 0.69 | 0.0 | 0.05 | 14.94 | 0.00 | 2.214 | 9.42 | 0.38 | 12.3 | 87.7 | 0.0 | -3.96 | 0.43 | 0.76 | 0.78 | 1.95 | 9696 | 1446 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7oB4 | 12794 | 2023-02-19 | 2021-04-21 | 3.22 | 3.25 | — | 3.5 | 0.009 | 1.03 | 0.0 | 0.07 | 13.89 | 0.00 | 2.206 | 23.16 | 0.09 | 3.7 | 96.3 | 0.0 | -4.30 | 0.54 | 0.78 | 4.06 | 3.5 | 0.006 | 0.75 | 0.0 | 0.05 | 15.20 | 0.00 | 2.116 | 18.99 | 0.64 | 7.1 | 92.9 | 0.0 | -3.95 | 1.20 | 0.44 | 0.75 | 4.91 | 10066 | 1288 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NYG | 0543 | 2023-02-27 | 2019-02-11 | 3.9 | 4.55 | — | 3.9 | 0.005 | 0.97 | 0.0 | 0.06 | 10.45 | 0.00 | 2.242 | 9.09 | 0.16 | 14.1 | 85.9 | 0.0 | -4.66 | 0.82 | 0.64 | 0.83 | 3.9 | 0.003 | 0.73 | 0.0 | 0.05 | 13.61 | 0.00 | 2.093 | 18.88 | 0.18 | 11.3 | 88.7 | 0.0 | -3.94 | 1.29 | 0.83 | 0.68 | 0.96 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2023-02-16 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.87 | 0.0 | 0.04 | 11.23 | 0.00 | 2.241 | 5.93 | 0.00 | 5.2 | 94.8 | 0.0 | -3.94 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7UN5 | 26613 | 2023-02-17 | 2022-04-08 | 3.13 | 3.63 | 3.08 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 14.46 | 0.00 | 2.387 | 11.64 | 0.51 | 7.0 | 93.0 | 0.0 | -3.83 | 0.40 | 0.80 | 4.50 | 3.6 | 0.005 | 0.77 | 0.0 | 0.04 | 15.18 | 0.00 | 2.237 | 10.71 | 0.77 | 8.5 | 91.5 | 0.0 | -3.92 | 0.47 | 0.35 | 0.74 | 4.54 | 4380 | 620 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WP1 | 32666 | 2023-02-17 | 2022-01-22 | 3.77 | 3.91 | — | 3.9 | 0.006 | 1.16 | 0.0 | 0.07 | 14.50 | 0.02 | 2.338 | 3.88 | 0.00 | 12.2 | 87.5 | 0.2 | -5.40 | 0.64 | 0.78 | 2.71 | 3.9 | 0.005 | 0.82 | 0.0 | 0.05 | 16.13 | 0.01 | 2.091 | 15.82 | 1.13 | 14.6 | 85.1 | 0.2 | -3.91 | 1.24 | 0.64 | 0.79 | 2.28 | 3305 | 423 | 4 | 0 | 2 | 0 | 0 | logfile |