The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NCi | 12267 | 2024-03-15 | 2021-01-28 | 3.55 | 3.67 | 3.44 | 4.0 | 0.012 | 1.57 | 2.0 | 0.10 | 15.57 | 0.01 | 2.481 | 0.35 | 0.00 | 8.9 | 91.1 | 0.0 | -3.74 | 0.68 | 0.59 | 1.81 | 3.8 | 0.004 | 0.63 | 2.0 | 0.05 | 15.17 | 0.00 | 1.925 | 22.63 | 6.30 | 14.3 | 85.7 | 0.0 | -4.47 | 1.57 | 0.64 | 0.58 | 0.62 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 6WQK | 21871 | 2024-03-10 | 2020-04-29 | 3.1 | 3.26 | — | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 14.47 | 0.00 | 2.272 | 4.54 | 0.00 | 1.8 | 98.2 | 0.0 | -5.40 | 0.48 | 0.84 | 4.99 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 13.79 | 0.00 | 2.240 | 4.81 | 1.62 | 4.4 | 95.6 | 0.0 | -4.46 | 0.45 | 0.45 | 0.85 | 5.58 | 2070 | 285 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZH7 | 14726 | 2024-03-15 | 2022-04-05 | 3.3 | 3.52 | 2.56 | 3.5 | 0.003 | 0.74 | 0.0 | 0.05 | 11.41 | 0.01 | 2.267 | 3.63 | 0.00 | 2.7 | 97.3 | 0.0 | -4.42 | 0.36 | 0.78 | 5.27 | 3.5 | 0.006 | 0.69 | 0.0 | 0.05 | 14.87 | 0.00 | 2.025 | 9.16 | 0.73 | 13.1 | 86.9 | 0.0 | -4.46 | 1.50 | 0.39 | 0.82 | 5.45 | 11520 | 760 | 10 | 0 | 0 | 0 | 5390 | logfile |
✔ | 6RTB | 4996 | 2024-03-10 | 2019-05-22 | 3.46 | 3.57 | — | 3.5 | 0.009 | 1.23 | 0.0 | 0.07 | 15.08 | 0.01 | 2.122 | 6.27 | 2.61 | 18.9 | 80.9 | 0.2 | -4.64 | 0.62 | 0.79 | 4.22 | 3.5 | 0.005 | 0.82 | 0.0 | 0.05 | 15.69 | 0.00 | 2.115 | 15.56 | 7.84 | 21.4 | 78.6 | 0.0 | -4.45 | 0.81 | 0.63 | 0.81 | 4.11 | 4681 | 699 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oLN | 16959 | 2024-03-10 | 2023-03-30 | 3.3 | 3.38 | 2.68 | 3.7 | 0.002 | 0.48 | 0.0 | 0.04 | 9.04 | 0.00 | 2.271 | 10.63 | 2.41 | 8.2 | 91.8 | 0.0 | -4.24 | 0.41 | 0.82 | 4.41 | 3.6 | 0.006 | 0.66 | 0.0 | 0.05 | 17.29 | 0.00 | 2.200 | 17.48 | 10.69 | 7.1 | 92.9 | 0.0 | -4.45 | 2.86 | 0.40 | 0.82 | 4.46 | 2830 | 360 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C1D | 30269 | 2024-03-10 | 2020-05-03 | 3.8 | 4.18 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 13.99 | 0.00 | 2.367 | 18.87 | 0.00 | 20.4 | 79.6 | 0.0 | -6.46 | 0.34 | 0.74 | 3.47 | 6.5 | 0.003 | 0.64 | 0.0 | 0.05 | 15.65 | 0.00 | 2.268 | 13.24 | 8.85 | 16.0 | 84.0 | 0.0 | -4.39 | 2.81 | 0.38 | 0.75 | 3.16 | 2034 | 306 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2024-03-14 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.91 | 0.0 | 0.04 | 18.21 | 0.00 | 1.845 | 75.71 | 11.64 | 20.8 | 75.4 | 3.8 | -4.38 | 0.84 | 0.39 | 0.73 | 1.07 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 3LoS | 5137 | 2024-03-12 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.005 | 1.29 | 0.0 | 0.06 | 15.90 | 0.01 | 2.091 | 33.18 | 0.00 | 21.9 | 74.2 | 3.9 | -4.38 | 1.32 | 0.63 | 0.56 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YL0 | 33901 | 2024-03-10 | 2022-07-25 | 3.2 | 3.47 | 3.15 | 3.4 | 0.016 | 2.51 | 0.0 | 0.11 | 15.56 | 0.01 | 2.515 | 18.86 | 0.00 | 5.0 | 95.0 | 0.0 | -4.14 | 0.41 | 0.74 | 4.76 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 13.89 | 0.00 | 2.136 | 10.54 | 2.78 | 10.0 | 90.0 | 0.0 | -4.36 | 1.69 | 0.44 | 0.78 | 5.01 | 2958 | 396 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NYM | 0546 | 2024-03-15 | 2019-02-11 | 3.6 | 4.42 | — | 4.1 | 0.005 | 0.94 | 0.0 | 0.06 | 10.43 | 0.00 | 2.260 | 8.20 | 0.32 | 12.6 | 87.4 | 0.0 | -5.10 | 0.87 | 0.78 | 2.54 | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 12.87 | 0.00 | 2.160 | 16.77 | 2.24 | 18.3 | 81.7 | 0.0 | -4.35 | 1.19 | 0.87 | 0.79 | 2.43 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CYV | 27085 | 2024-03-10 | 2022-05-24 | 3.5 | 3.17 | 3.47 | 3.7 | 0.003 | 0.61 | 0.0 | 0.05 | 10.01 | 0.00 | 2.423 | 5.36 | 0.00 | 5.9 | 94.1 | 0.0 | -4.11 | 0.58 | 0.72 | 2.74 | 3.4 | 0.004 | 0.73 | 0.0 | 0.05 | 15.99 | 0.00 | 2.281 | 10.56 | 6.50 | 7.6 | 91.8 | 0.6 | -4.32 | 1.34 | 0.60 | 0.75 | 2.48 | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VHA | 21201 | 2024-03-10 | 2020-01-09 | 4.3 | 4.35 | — | 7.8 | 0.007 | 1.02 | 0.0 | 0.05 | 15.14 | 0.01 | 2.319 | 26.84 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.55 | 0.54 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 13.37 | 0.00 | 2.246 | 12.62 | 0.00 | 12.4 | 87.6 | 0.0 | -4.31 | 3.37 | 0.57 | 0.60 | — | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V47 | 31702 | 2024-03-10 | 2021-08-12 | 2.8 | 2.80 | — | 3.0 | 0.007 | 0.78 | 0.0 | 0.06 | 12.91 | 0.00 | 2.567 | 6.32 | 0.00 | 18.6 | 81.4 | 0.0 | -5.86 | 0.44 | 0.80 | 6.31 | 3.0 | 0.004 | 0.69 | 0.0 | 0.06 | 17.28 | 0.00 | 2.415 | 6.71 | 7.32 | 18.1 | 81.9 | 0.0 | -4.31 | 0.34 | 0.44 | 0.80 | 6.12 | 2484 | 366 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RFP | 24444 | 2024-03-10 | 2021-07-14 | 4.4 | 4.57 | — | 4.3 | 0.014 | 2.06 | 8.0 | 0.12 | 7.12 | 0.01 | 1.581 | 3.60 | 8.00 | 9.5 | 87.5 | 3.0 | -1.46 | 0.68 | 0.61 | — | 4.3 | 0.005 | 0.99 | 0.0 | 0.05 | 7.64 | 0.00 | 2.109 | 12.42 | 0.00 | 21.8 | 77.6 | 0.6 | -4.29 | 1.50 | 0.81 | 0.76 | — | 5532 | 1114 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AZ4 | 15753 | 2024-03-10 | 2022-09-05 | 2.2 | 2.27 | 2.10 | 2.2 | 0.006 | 0.72 | 0.0 | 0.05 | 10.22 | 0.00 | 2.292 | 1.89 | 0.00 | 7.7 | 92.3 | 0.0 | -3.94 | 0.57 | 0.88 | 8.31 | 2.2 | 0.004 | 0.69 | 0.0 | 0.05 | 13.32 | 0.00 | 2.281 | 2.83 | 2.92 | 7.7 | 92.3 | 0.0 | -4.28 | 0.47 | 0.59 | 0.91 | 7.74 | 2280 | 280 | 20 | 0 | 10 | 100 | 0 | logfile |
✔ | 7U14 | 26277 | 2024-03-10 | 2022-02-19 | 4.5 | 4.22 | — | 4.6 | 0.006 | 0.94 | 0.0 | 0.07 | 19.58 | 0.00 | 2.369 | 21.08 | 6.30 | 10.5 | 89.5 | 0.0 | -3.07 | 0.30 | 0.52 | — | 4.7 | 0.006 | 1.06 | 0.0 | 0.07 | 15.93 | 0.00 | 2.137 | 21.37 | 0.00 | 15.3 | 84.7 | 0.0 | -4.28 | 1.55 | 0.33 | 0.60 | — | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6NYG | 0543 | 2024-03-15 | 2019-02-11 | 3.9 | 4.55 | — | 3.9 | 0.005 | 0.97 | 0.0 | 0.06 | 10.45 | 0.00 | 2.242 | 9.18 | 0.16 | 14.1 | 85.9 | 0.0 | -4.66 | 0.82 | 0.64 | 0.83 | 3.9 | 0.004 | 0.79 | 0.0 | 0.05 | 13.60 | 0.00 | 2.125 | 25.60 | 2.77 | 17.7 | 82.3 | 0.0 | -4.27 | 0.73 | 0.83 | 0.69 | 1.13 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4A | 31705 | 2024-03-10 | 2021-08-12 | 3.2 | 3.19 | — | 3.3 | 0.002 | 0.52 | 0.0 | 0.05 | 14.28 | 0.00 | 2.423 | 8.54 | 0.00 | 7.9 | 92.1 | 0.0 | -5.80 | 0.42 | 0.82 | 3.23 | 3.2 | 0.003 | 0.52 | 0.0 | 0.05 | 17.31 | 0.00 | 2.349 | 5.01 | 7.88 | 11.8 | 88.2 | 0.0 | -4.26 | 1.59 | 0.42 | 0.82 | 3.59 | 1653 | 240 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VZF | 32227 | 2024-03-10 | 2021-11-16 | 2.95 | 2.71 | — | 3.0 | 0.009 | 1.06 | 0.0 | 0.06 | 16.23 | 0.01 | 1.971 | 38.45 | 0.00 | 26.5 | 73.5 | 0.0 | -5.56 | 0.30 | 0.43 | -0.13 | 2.8 | 0.004 | 0.92 | 0.0 | 0.05 | 18.65 | 0.00 | 2.097 | 12.69 | 6.03 | 18.5 | 81.5 | 0.0 | -4.26 | 1.85 | 0.37 | 0.63 | -0.15 | 2628 | 363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2024-03-11 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.81 | 0.00 | 2.550 | 7.73 | 0.00 | 18.2 | 81.3 | 0.5 | -4.24 | 2.61 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |