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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WZG | 21972 | 2023-02-18 | 2020-05-13 | 2.3 | 2.06 | 2.21 | 2.3 | 0.012 | 1.56 | 18.0 | 0.12 | 14.02 | 0.01 | 2.270 | 4.92 | 1.65 | 2.0 | 98.0 | 0.0 | 0.81 | 0.66 | 0.71 | 4.83 | 2.3 | 0.004 | 0.62 | 0.0 | 0.04 | 16.41 | 0.00 | 2.112 | 6.07 | 1.54 | 1.9 | 98.1 | 0.0 | 1.42 | 0.99 | 0.73 | 0.87 | 5.09 | 8939 | 1165 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZK9 | 11241 | 2023-02-27 | 2020-06-30 | 2.3 | 2.55 | — | 2.4 | 0.008 | 1.05 | 0.0 | 1.58 | 10.47 | 0.01 | 2.257 | 5.07 | 0.07 | 3.2 | 96.8 | 0.0 | -2.52 | 0.78 | 0.92 | 6.57 | 2.4 | 0.012 | 2.33 | 0.0 | 0.48 | 15.01 | 0.00 | 2.065 | 8.80 | 1.07 | 2.7 | 97.3 | 0.0 | 0.40 | 0.47 | 0.80 | 0.93 | 6.07 | 29587 | 3480 | 45 | 0 | 19 | 1472 | 0 | logfile |
✔ | 8CXQ | 27067 | 2023-02-22 | 2022-05-22 | 2.3 | 3.31 | 2.77 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 10.31 | 0.00 | 2.008 | 5.61 | 0.22 | 3.9 | 96.0 | 0.1 | 0.30 | 0.78 | 0.80 | 2.66 | 3.1 | 0.003 | 0.51 | 0.0 | 0.04 | 12.17 | 0.00 | 1.891 | 6.73 | 0.66 | 4.5 | 95.5 | 0.0 | -0.06 | 0.39 | 0.73 | 0.75 | 2.47 | 56384 | 3666 | 6 | 0 | 0 | 0 | 27792 | logfile |
✔ | 7oNJ | 12996 | 2023-02-22 | 2021-05-25 | 2.3 | 2.52 | 2.24 | 2.5 | 0.011 | 0.97 | 0.0 | 0.06 | 18.45 | 0.00 | 2.155 | 8.48 | 0.47 | 0.8 | 99.2 | 0.0 | -0.25 | 0.76 | 0.88 | 5.16 | 2.5 | 0.003 | 0.46 | 0.0 | 0.04 | 18.15 | 0.00 | 2.176 | 7.63 | 0.40 | 0.8 | 99.2 | 0.0 | 2.25 | 1.55 | 0.76 | 0.89 | 4.29 | 16947 | 1834 | 21 | 0 | 63 | 266 | 0 | logfile |
✔ | 7SQV | 25396 | 2023-02-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.30 | 0.00 | 2.295 | 1.36 | 1.67 | 1.1 | 98.9 | 0.0 | 1.71 | 1.99 | 0.77 | 0.90 | 3.84 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 6Li9 | 0903 | 2023-02-22 | 2019-12-10 | 2.3 | 2.38 | — | 2.4 | 0.007 | 1.00 | 0.0 | 0.07 | 13.94 | 0.01 | 2.265 | 2.26 | 0.21 | 5.0 | 95.0 | 0.0 | -4.31 | 0.63 | 0.75 | 4.03 | 2.4 | 0.003 | 0.69 | 0.0 | 0.05 | 16.15 | 0.00 | 2.104 | 6.48 | 1.85 | 4.1 | 95.9 | 0.0 | 0.17 | 1.69 | 0.72 | 0.84 | 3.68 | 17988 | 2164 | 22 | 0 | 26 | 246 | 0 | logfile |
✔ | 8E3X | 27872 | 2023-02-18 | 2022-08-17 | 2.3 | 3.02 | 2.29 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.239 | 5.84 | 0.00 | 2.1 | 97.9 | 0.0 | 1.49 | 0.70 | 0.82 | 3.16 | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 15.31 | 0.00 | 2.206 | 5.61 | 0.84 | 2.1 | 97.9 | 0.0 | 1.71 | 0.97 | 0.75 | 0.89 | 3.61 | 8979 | 1140 | 8 | 0 | 0 | 11 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-02-16 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MBQ | 23741 | 2023-02-27 | 2021-04-01 | 2.3 | 3.00 | — | 2.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.25 | 0.01 | 2.246 | 6.69 | 0.58 | 3.9 | 96.0 | 0.1 | 1.80 | 0.80 | 0.88 | 3.90 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 15.37 | 0.00 | 2.242 | 5.10 | 0.99 | 3.3 | 96.7 | 0.0 | 2.69 | 0.37 | 0.77 | 0.92 | 3.67 | 30616 | 3984 | 12 | 0 | 20 | 16 | 0 | logfile |
✔ | 6KPK | 0749 | 2023-02-23 | 2019-08-15 | 2.3 | 3.44 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.06 | 12.55 | 0.00 | 2.127 | 4.93 | 0.37 | 5.5 | 94.5 | 0.0 | -3.66 | 0.84 | 0.88 | 4.21 | 3.2 | 0.004 | 0.73 | 1.0 | 0.13 | 14.36 | 0.00 | 1.954 | 5.48 | 0.66 | 3.8 | 96.2 | 0.0 | 0.92 | 0.75 | 0.83 | 0.89 | 4.27 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 6SK0 | 10219 | 2023-02-17 | 2019-08-14 | 2.3 | 2.30 | 2.11 | 2.2 | 0.008 | 0.74 | 0.0 | 0.05 | 15.85 | 0.00 | 2.202 | 9.23 | 0.97 | 3.3 | 96.7 | 0.0 | -1.30 | 0.70 | 0.83 | 6.89 | 2.2 | 0.006 | 0.75 | 0.0 | 0.05 | 17.30 | 0.00 | 2.171 | 10.77 | 0.65 | 4.2 | 95.8 | 0.0 | -1.34 | 1.50 | 0.80 | 0.91 | 6.92 | 5826 | 792 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZU | 26918 | 2023-02-18 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.14 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.003 | 0.52 | 0.0 | 0.04 | 17.57 | 0.00 | 2.102 | 3.83 | 0.78 | 4.0 | 96.0 | 0.0 | 2.44 | 0.18 | 0.59 | 0.87 | 5.51 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✔ | 6KQ4 | 0750 | 2023-02-23 | 2019-08-16 | 2.3 | 3.29 | — | 3.0 | 0.007 | 0.65 | 0.0 | 0.06 | 13.31 | 0.00 | 2.167 | 3.58 | 0.37 | 4.3 | 95.7 | 0.0 | -3.29 | 0.85 | 0.87 | 4.30 | 2.9 | 0.005 | 0.74 | 1.0 | 0.13 | 15.73 | 0.00 | 2.009 | 4.52 | 0.44 | 3.8 | 96.2 | 0.0 | 1.19 | 0.79 | 0.84 | 0.89 | 4.03 | 62206 | 3936 | 24 | 0 | 24 | 0 | 31222 | logfile |
✔ | 7SXT | 25505 | 2023-02-25 | 2021-11-24 | 2.31 | 3.14 | — | 2.6 | 0.004 | 0.74 | 0.0 | 0.05 | 12.87 | 0.01 | 2.287 | 2.67 | 0.00 | 2.8 | 97.2 | 0.0 | -0.67 | 0.84 | 0.83 | 2.91 | 2.6 | 0.004 | 0.60 | 0.0 | 0.05 | 14.57 | 0.00 | 2.167 | 7.17 | 0.91 | 2.3 | 97.7 | 0.0 | 0.60 | 1.18 | 0.85 | 0.87 | 3.03 | 25248 | 3120 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 7QKW | 14055 | 2023-02-17 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.50 | 0.0 | 0.05 | 16.64 | 0.00 | 2.420 | 1.91 | 2.54 | 4.4 | 95.6 | 0.0 | -2.76 | 1.36 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 7SQ6 | 25377 | 2023-02-21 | 2021-11-04 | 2.32 | 2.12 | — | 2.3 | 0.006 | 0.77 | 0.0 | 0.06 | 16.54 | 0.00 | 2.408 | 4.99 | 0.00 | 2.8 | 97.2 | 0.0 | 1.57 | 0.69 | 0.88 | 4.86 | 2.3 | 0.004 | 0.58 | 0.0 | 0.04 | 16.64 | 0.00 | 2.218 | 3.33 | 2.45 | 2.1 | 97.9 | 0.0 | 2.12 | 0.91 | 0.70 | 0.90 | 4.69 | 15342 | 1868 | 16 | 0 | 14 | 12 | 0 | logfile |
✔ | 6VSA | 21373 | 2023-02-19 | 2020-02-10 | 2.32 | 3.14 | — | 2.5 | 0.013 | 2.26 | 75.0 | 0.16 | 18.03 | 0.01 | 2.048 | 13.16 | 4.44 | 2.3 | 97.7 | 0.0 | -1.58 | 0.94 | 0.94 | 4.86 | 2.6 | 0.004 | 0.59 | 0.0 | 0.04 | 17.37 | 0.00 | 2.166 | 11.53 | 1.74 | 0.4 | 99.5 | 0.1 | 1.16 | 1.15 | 0.93 | 0.90 | 4.49 | 9712 | 1175 | 10 | 0 | 0 | 42 | 0 | logfile |
✔ | 7UKH | 26581 | 2023-02-20 | 2022-04-01 | 2.33 | 2.55 | 2.38 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 7.98 | 1.80 | 2.9 | 97.1 | 0.0 | 0.99 | 0.77 | 0.85 | 3.75 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 18.19 | 0.00 | 2.189 | 7.26 | 1.41 | 2.6 | 97.4 | 0.0 | 1.49 | 0.29 | 0.75 | 0.86 | 3.77 | 12340 | 1536 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6L3T | 0825 | 2023-02-23 | 2019-10-15 | 2.34 | 2.41 | 2.27 | 2.4 | 0.010 | 1.07 | 0.0 | 0.05 | 15.75 | 0.01 | 2.306 | 1.05 | 3.61 | 1.0 | 99.0 | 0.0 | -3.24 | 0.68 | 0.86 | 4.85 | 2.4 | 0.002 | 0.55 | 0.0 | 0.03 | 16.32 | 0.00 | 1.992 | 2.15 | 1.20 | 1.1 | 98.9 | 0.0 | 3.02 | 1.61 | 0.67 | 0.87 | 4.18 | 19722 | 1206 | 18 | 0 | 6 | 204 | 9588 | logfile |
✘ | 8EAL | 27980 | 2023-02-26 | 2022-08-29 | 2.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28500 | 3534 | 18 | 11 | 16 | 15 | 0 | logfile |