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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7oY2 | 13108 | 2024-03-11 | 2021-06-23 | 2.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7166 | 858 | 7 | 0 | 7 | 24 | 0 | logfile |
✔ | 8F6A | 28878 | 2024-03-19 | 2022-11-16 | 2.06 | 3.05 | 2.14 | 2.7 | 0.004 | 0.69 | 0.0 | 0.05 | 17.55 | 0.01 | 2.320 | 4.08 | 3.21 | 3.1 | 96.9 | 0.0 | 1.20 | 0.80 | 0.76 | 4.28 | 2.7 | 0.005 | 0.63 | 0.0 | 0.04 | 16.28 | 0.00 | 1.429 | 2.59 | 0.99 | 4.1 | 95.9 | 0.0 | 1.45 | 0.85 | 0.81 | 0.91 | 4.64 | 93058 | 5950 | 28 | 0 | 0 | 0 | 47110 | logfile |
✔ | 7QKL | 14046 | 2024-03-10 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.14 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.006 | 0.71 | 0.0 | 0.05 | 17.27 | 0.01 | 2.435 | 3.96 | 0.76 | 2.7 | 97.3 | 0.0 | -1.28 | 1.99 | 0.45 | 0.91 | 8.47 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P5V | 17454 | 2024-03-11 | 2023-05-24 | 2.07 | 2.90 | 2.14 | 2.5 | 0.009 | 1.09 | 0.0 | 0.06 | 14.45 | 0.02 | 2.018 | 1.82 | 0.53 | 2.7 | 97.3 | 0.0 | 0.06 | 0.90 | 0.95 | 6.07 | 2.6 | 0.005 | 0.67 | 0.0 | 0.04 | 15.02 | 0.00 | 1.912 | 3.15 | 0.58 | 2.1 | 97.9 | 0.0 | 1.32 | 1.70 | 0.86 | 0.93 | 5.62 | 54248 | 6726 | 18 | 0 | 24 | 1280 | 0 | logfile |
✔ | 8G15 | 29662 | 2024-03-14 | 2023-02-01 | 2.07 | 2.66 | 1.97 | 2.4 | 0.005 | 0.96 | 0.0 | 0.05 | 16.07 | 0.01 | 2.243 | 5.30 | 1.59 | 5.0 | 95.0 | 0.0 | -1.62 | 0.88 | 0.90 | 5.37 | 2.4 | 0.002 | 0.54 | 0.0 | 0.05 | 16.32 | 0.01 | 2.221 | 3.40 | 2.34 | 3.5 | 96.5 | 0.0 | 0.33 | 0.28 | 0.88 | 0.91 | 5.82 | 10056 | 1336 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D1G | 27129 | 2024-03-17 | 2022-05-27 | 2.07 | 2.29 | 2.10 | 2.3 | 0.006 | 0.69 | 0.0 | 0.04 | 20.60 | 0.00 | 2.207 | 13.54 | 0.66 | 1.2 | 98.8 | 0.0 | 1.81 | 0.74 | 0.85 | 5.81 | 2.3 | 0.003 | 0.55 | 0.0 | 0.04 | 16.57 | 0.00 | 2.164 | 7.49 | 0.66 | 1.2 | 98.8 | 0.0 | 1.94 | 0.90 | 0.71 | 0.86 | 5.52 | 16201 | 1735 | 15 | 0 | 61 | 620 | 0 | logfile |
✔ | 8G16 | 29663 | 2024-03-14 | 2023-02-01 | 2.07 | 2.69 | 2.04 | 2.3 | 0.004 | 0.79 | 0.0 | 0.05 | 16.16 | 0.01 | 0.766 | 4.86 | 1.21 | 4.1 | 95.9 | 0.0 | -1.24 | 0.88 | 0.91 | 5.21 | 2.4 | 0.003 | 0.55 | 0.0 | 0.04 | 16.09 | 0.01 | 2.077 | 9.46 | 1.21 | 3.5 | 96.5 | 0.0 | 0.76 | 1.23 | 0.88 | 0.91 | 5.75 | 10108 | 1336 | 4 | 0 | 0 | 0 | 4 | logfile |
✔ | 7TFA | 25867 | 2024-03-24 | 2022-01-06 | 2.07 | 2.20 | — | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.35 | 0.00 | 2.014 | 5.94 | 2.16 | 3.6 | 96.4 | 0.0 | 0.31 | 0.47 | 0.65 | 4.55 | 2.2 | 0.002 | 0.49 | 0.0 | 0.04 | 16.89 | 0.00 | 1.897 | 19.57 | 3.03 | 3.8 | 96.2 | 0.0 | 0.80 | 0.39 | 0.70 | 0.82 | 5.14 | 42636 | 5424 | 36 | 0 | 24 | 0 | 120 | logfile |
✔ | 8E2D | 27832 | 2024-03-12 | 2022-08-15 | 2.07 | 2.27 | 2.16 | 2.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 1.968 | 6.49 | 0.85 | 2.0 | 98.0 | 0.0 | 1.44 | 0.63 | 0.82 | 4.02 | 2.3 | 0.003 | 0.55 | 0.0 | 0.04 | 15.80 | 0.00 | 1.978 | 6.87 | 0.88 | 2.5 | 97.5 | 0.0 | 1.79 | 0.35 | 0.64 | 0.83 | 3.89 | 62460 | 3936 | 2 | 0 | 0 | 0 | 31562 | logfile |
✔ | 8iJX | 35502 | 2024-03-15 | 2023-02-28 | 2.08 | 2.24 | 2.11 | 2.3 | 0.007 | 0.93 | 0.0 | 0.05 | 15.70 | 0.01 | 2.024 | 5.04 | 1.50 | 1.7 | 98.3 | 0.0 | 1.40 | 0.64 | 0.84 | 6.06 | 2.3 | 0.005 | 0.65 | 0.0 | 0.05 | 17.21 | 0.01 | 1.968 | 5.28 | 2.07 | 1.8 | 98.2 | 0.0 | 1.02 | 0.79 | 0.69 | 0.87 | 5.84 | 10545 | 1251 | 6 | 0 | 12 | 373 | 0 | logfile |
✔ | 7KJR | 22898 | 2024-03-10 | 2020-10-26 | 2.08 | 2.52 | 2.15 | 2.4 | 0.006 | 0.84 | 0.0 | 0.05 | 19.50 | 0.00 | 2.254 | 7.60 | 0.25 | 1.8 | 98.2 | 0.0 | 1.13 | 0.68 | 0.87 | 5.29 | 2.4 | 0.003 | 0.52 | 0.0 | 0.04 | 17.36 | 0.00 | 2.247 | 10.31 | 0.99 | 2.3 | 97.7 | 0.0 | 1.32 | 0.26 | 0.66 | 0.87 | 4.55 | 3840 | 448 | 8 | 0 | 2 | 122 | 0 | logfile |
✔ | 8CAi | 16526 | 2024-03-23 | 2023-01-24 | 2.08 | 1.77 | 1.93 | 1.9 | 0.014 | 1.51 | 2.0 | 0.13 | 22.07 | 0.03 | 1.839 | 0.59 | 0.86 | 3.7 | 96.2 | 0.1 | -1.66 | 0.65 | 0.81 | 5.19 | 1.9 | 0.002 | 0.60 | 0.0 | 0.04 | 22.42 | 0.01 | 1.904 | 8.53 | 1.41 | 2.1 | 97.9 | 0.0 | 0.82 | 1.57 | 0.73 | 0.84 | 4.63 | 37814 | 1552 | 33 | 1114 | 90 | 1416 | 0 | logfile |
✘ | 7D1U | 30548 | 2024-03-26 | 2020-09-15 | 2.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✔ | 7ZYL | 15026 | 2024-03-10 | 2022-05-25 | 2.08 | 2.56 | 2.12 | 2.4 | 0.010 | 0.62 | 0.0 | 0.05 | 18.17 | 0.00 | 2.104 | 14.15 | 0.00 | 0.8 | 99.2 | 0.0 | 0.55 | 0.77 | 0.89 | 6.49 | 2.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.73 | 0.00 | 2.326 | 6.30 | 1.19 | 0.8 | 99.2 | 0.0 | 0.42 | 0.30 | 0.79 | 0.90 | 6.49 | 3992 | 484 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7Z16 | 14442 | 2024-03-24 | 2022-02-24 | 2.09 | 2.57 | 2.21 | 2.5 | 0.006 | 0.73 | 0.0 | 0.05 | 14.77 | 0.01 | 1.956 | 4.89 | 1.04 | 2.1 | 97.9 | 0.0 | 1.45 | 0.77 | 0.85 | 5.34 | 2.5 | 0.002 | 0.52 | 0.0 | 0.05 | 15.07 | 0.00 | 1.886 | 2.95 | 0.54 | 1.9 | 98.1 | 0.0 | 1.64 | 1.97 | 0.71 | 0.83 | 5.08 | 44690 | 2882 | 20 | 0 | 10 | 6 | 22240 | logfile |
✔ | 8G6Y | 29788 | 2024-03-19 | 2023-02-16 | 2.09 | 1.85 | 2.01 | 1.9 | 0.007 | 0.87 | 0.0 | 0.05 | 23.23 | 0.02 | 1.446 | 5.72 | 3.72 | 3.5 | 96.3 | 0.2 | -1.60 | 0.73 | 0.86 | 6.08 | 2.0 | 0.005 | 0.78 | 0.0 | 0.04 | 23.08 | 0.01 | 1.760 | 5.76 | 2.79 | 3.4 | 96.5 | 0.1 | -0.25 | 1.19 | 0.72 | 0.88 | 5.96 | 93683 | 3175 | 69 | 3037 | 250 | 3460 | 0 | logfile |
✔ | 7RZQ | 24774 | 2024-03-10 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.02 | 0.00 | 2.341 | 5.30 | 1.07 | 0.0 | 100.0 | 0.0 | 5.97 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E43 | 27878 | 2024-03-13 | 2022-08-17 | 2.09 | 2.88 | 2.49 | 2.6 | 0.006 | 0.57 | 0.0 | 0.03 | 23.48 | 0.02 | 1.945 | 2.00 | 1.06 | 4.9 | 94.8 | 0.3 | -2.82 | 0.73 | 0.90 | 5.55 | 2.6 | 0.006 | 0.61 | 0.0 | 0.04 | 23.27 | 0.01 | 1.931 | 3.36 | 1.70 | 5.5 | 94.1 | 0.4 | -0.27 | 0.38 | 0.72 | 0.91 | 5.09 | 115905 | 1179 | 11 | 3015 | 1 | 0 | 41874 | logfile |
✔ | 8BC3 | 15961 | 2024-03-17 | 2022-10-14 | 2.1 | 2.00 | 2.14 | 2.2 | 0.014 | 2.07 | 0.0 | 0.11 | 19.40 | 0.02 | 2.310 | 1.34 | 11.95 | 3.3 | 96.7 | 0.0 | -4.28 | 0.71 | 0.84 | 5.67 | 2.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.32 | 0.00 | 2.158 | 3.95 | 1.38 | 0.6 | 99.4 | 0.0 | 1.69 | 0.50 | 0.76 | 0.88 | 6.23 | 16880 | 2170 | 30 | 0 | 10 | 500 | 0 | logfile |
✔ | 8DBE | 27281 | 2024-03-16 | 2022-06-14 | 2.1 | 2.18 | 2.26 | 2.2 | 0.014 | 0.99 | 0.0 | 0.05 | 17.66 | 0.05 | 1.867 | 9.20 | 3.05 | 4.1 | 95.9 | 0.0 | 0.97 | 0.73 | 0.90 | 6.43 | 2.2 | 0.003 | 1.76 | 0.0 | 0.05 | 17.45 | 0.00 | 1.848 | 7.14 | 1.80 | 2.9 | 97.1 | 0.0 | 0.28 | 0.34 | 0.74 | 0.91 | 6.31 | 14982 | 1896 | 18 | 0 | 30 | 42 | 0 | logfile |