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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PSN | 13615 | 2023-04-21 | 2021-09-23 | 2.9 | 3.55 | — | 3.5 | 0.009 | 0.82 | 0.0 | 0.04 | 14.29 | 0.01 | 1.923 | 4.83 | 0.00 | 2.7 | 97.3 | 0.0 | -3.01 | 0.59 | 0.78 | 3.43 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 16.09 | 0.00 | 1.998 | 7.33 | 1.30 | 1.4 | 98.6 | 0.0 | 1.16 | 0.50 | 0.58 | 0.79 | 2.48 | 9464 | 1170 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 6XLB | 22238 | 2023-04-22 | 2020-06-28 | 3.8 | 4.01 | — | 3.8 | 0.002 | 0.43 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 7.33 | 0.00 | 2.0 | 98.0 | 0.0 | -2.43 | 0.82 | 0.77 | 1.14 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 16.05 | 0.00 | 2.137 | 17.34 | 0.48 | 3.2 | 96.8 | 0.0 | -0.32 | 0.89 | 0.84 | 0.81 | 1.48 | 11180 | 1380 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KLU | 22918 | 2023-04-25 | 2020-11-01 | 3.5 | 3.35 | — | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.43 | 0.00 | 2.005 | 5.76 | 0.00 | 4.0 | 96.0 | 0.0 | -0.73 | 0.77 | 0.80 | 2.13 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 17.17 | 0.00 | 1.863 | 8.64 | 0.09 | 6.2 | 93.8 | 0.0 | -1.15 | 0.95 | 0.78 | 0.82 | 2.23 | 19742 | 2452 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6PLQ | 20372 | 2023-04-23 | 2019-07-01 | 3.4 | 4.30 | — | 4.3 | 0.002 | 0.53 | 0.0 | 0.05 | 7.12 | 0.00 | 2.285 | 5.97 | 0.00 | 2.0 | 98.0 | 0.0 | -4.40 | 0.57 | 0.36 | 0.62 | 3.9 | 0.004 | 0.98 | 0.0 | 0.05 | 14.71 | 0.00 | 2.167 | 14.91 | 0.45 | 4.9 | 95.1 | 0.0 | -1.16 | 2.47 | 0.73 | 0.78 | 1.41 | 14240 | 1730 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7Y13 | 33555 | 2023-04-19 | 2022-06-06 | 3.1 | 3.20 | 3.10 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 13.19 | 0.01 | 2.195 | 8.24 | 0.00 | 6.1 | 93.9 | 0.0 | 1.88 | 0.59 | 0.80 | 3.01 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 15.52 | 0.00 | 2.192 | 8.24 | 0.43 | 5.3 | 94.7 | 0.0 | 2.76 | 0.26 | 0.54 | 0.80 | 2.48 | 2199 | 264 | 1 | 0 | 7 | 2 | 0 | logfile |
✔ | 7KCM | 22816 | 2023-04-22 | 2020-10-06 | 3.43 | 3.27 | — | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 15.77 | 0.00 | 1.994 | 9.30 | 0.00 | 4.5 | 95.5 | 0.0 | 0.75 | 0.80 | 0.83 | 2.81 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 17.00 | 0.00 | 1.870 | 12.71 | 0.25 | 4.9 | 95.1 | 0.0 | -0.26 | 0.39 | 0.81 | 0.87 | 2.75 | 10838 | 1347 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7U2N | 26316 | 2023-04-23 | 2022-02-24 | 2.8 | 3.30 | — | 3.4 | 0.007 | 0.77 | 0.0 | 0.05 | 8.79 | 0.00 | 2.195 | 23.96 | 0.00 | 8.6 | 91.4 | 0.0 | -4.23 | 0.52 | 0.81 | 5.21 | 3.3 | 0.003 | 0.76 | 0.0 | 0.04 | 15.22 | 0.00 | 2.160 | 12.12 | 2.24 | 5.4 | 94.5 | 0.1 | -0.68 | 0.74 | 0.47 | 0.78 | 3.69 | 14080 | 1725 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7JPP | 22418 | 2023-04-23 | 2020-08-09 | 3.7 | 3.83 | — | 3.8 | 0.007 | 1.18 | 0.0 | 0.06 | 15.25 | 0.01 | 2.061 | 3.35 | 0.00 | 1.6 | 98.4 | 0.0 | -1.90 | 0.72 | 0.78 | 2.10 | 3.8 | 0.003 | 0.57 | 0.0 | 0.04 | 16.73 | 0.00 | 2.012 | 6.27 | 0.18 | 2.3 | 97.7 | 0.0 | 0.74 | 2.22 | 0.74 | 0.79 | 1.33 | 14872 | 1816 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7T4Q | 25685 | 2023-04-23 | 2021-12-10 | 2.9 | 3.12 | — | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 12.96 | 0.01 | 2.184 | 5.12 | 0.00 | 3.9 | 96.1 | 0.0 | -0.62 | 0.75 | 0.82 | 3.45 | 3.0 | 0.003 | 0.71 | 0.0 | 0.04 | 16.18 | 0.00 | 2.141 | 8.93 | 2.58 | 3.0 | 97.0 | 0.0 | 0.35 | 1.31 | 0.76 | 0.85 | 2.90 | 15473 | 1946 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7RMi | 24572 | 2023-04-20 | 2021-07-27 | 3.2 | 3.78 | 3.15 | 3.7 | 0.004 | 0.84 | 0.0 | 0.05 | 12.68 | 0.01 | 2.296 | 4.36 | 0.00 | 3.4 | 96.6 | 0.0 | -1.03 | 0.69 | 0.72 | 2.32 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.60 | 0.00 | 2.196 | 8.23 | 0.57 | 3.1 | 96.9 | 0.0 | 0.53 | 1.28 | 0.66 | 0.78 | 2.20 | 7205 | 960 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7S4X | 24838 | 2023-04-23 | 2021-09-09 | 2.76 | 3.30 | — | 3.1 | 0.006 | 0.60 | 0.0 | 0.04 | 17.12 | 0.00 | 1.878 | 7.05 | 0.00 | 4.0 | 96.0 | 0.0 | 0.02 | 0.87 | 0.89 | 4.31 | 3.1 | 0.003 | 0.51 | 0.0 | 0.04 | 17.52 | 0.00 | 1.929 | 7.34 | 0.49 | 3.2 | 96.8 | 0.0 | 0.97 | 0.30 | 0.83 | 0.88 | 3.63 | 14491 | 1354 | 10 | 161 | 5 | 7 | 0 | logfile |
✔ | 7RKN | 24501 | 2023-04-21 | 2021-07-22 | 3.6 | 3.80 | — | 3.7 | 0.004 | 0.97 | 0.0 | 0.06 | 12.67 | 0.01 | 2.206 | 7.90 | 0.00 | 4.7 | 95.3 | 0.0 | -2.17 | 0.74 | 0.81 | 2.81 | 3.7 | 0.004 | 0.66 | 0.0 | 0.04 | 14.86 | 0.00 | 2.098 | 14.46 | 0.00 | 4.6 | 95.4 | 0.0 | -1.46 | 0.44 | 0.74 | 0.83 | 2.38 | 9393 | 1201 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RMH | 24570 | 2023-04-20 | 2021-07-27 | 3.1 | 4.02 | 3.03 | 3.9 | 0.004 | 0.75 | 0.0 | 0.05 | 13.42 | 0.01 | 2.290 | 2.56 | 0.00 | 4.1 | 95.9 | 0.0 | -1.32 | 0.74 | 0.80 | 2.69 | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.01 | 0.00 | 2.236 | 4.98 | 0.00 | 3.4 | 96.5 | 0.1 | 0.64 | 0.53 | 0.68 | 0.81 | 2.67 | 7434 | 986 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PBY | 20295 | 2023-04-26 | 2019-06-14 | 3.67 | 3.77 | — | 3.7 | 0.008 | 0.93 | 0.0 | 0.06 | 14.38 | 0.01 | 2.248 | 6.20 | 0.00 | 4.3 | 95.7 | 0.0 | -3.45 | 0.56 | 0.56 | 2.08 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 15.78 | 0.00 | 2.159 | 12.62 | 0.63 | 3.0 | 97.0 | 0.0 | 0.63 | 1.52 | 0.69 | 0.77 | 1.39 | 23832 | 3268 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JPo | 22417 | 2023-04-23 | 2020-08-09 | 3.2 | 2.55 | — | 3.2 | 0.007 | 1.09 | 0.0 | 0.06 | 15.53 | 0.01 | 2.073 | 2.39 | 0.00 | 3.0 | 97.0 | 0.0 | -1.99 | 0.79 | 0.81 | 2.74 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 16.90 | 0.00 | 1.959 | 5.65 | 0.11 | 2.4 | 97.6 | 0.0 | 0.62 | 0.45 | 0.81 | 0.83 | 1.84 | 16087 | 1966 | 9 | 0 | 7 | 0 | 0 | logfile |
✔ | 7UN6 | 26614 | 2023-04-21 | 2022-04-09 | 3.3 | 3.43 | 3.19 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 13.87 | 0.00 | 1.879 | 11.49 | 0.00 | 5.0 | 95.0 | 0.0 | -0.89 | 0.49 | 0.57 | 2.11 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 16.12 | 0.00 | 2.100 | 11.27 | 0.20 | 5.0 | 95.0 | 0.0 | -0.07 | 0.70 | 0.57 | 0.70 | 1.64 | 9042 | 1118 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VFJ | 31956 | 2023-04-21 | 2021-09-13 | 3.98 | 4.28 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.05 | 13.08 | 0.01 | 2.134 | 13.86 | 0.00 | 7.0 | 92.8 | 0.3 | -0.92 | 0.66 | 0.77 | 1.38 | 4.1 | 0.005 | 0.95 | 0.0 | 0.05 | 16.24 | 0.01 | 2.113 | 22.31 | 1.42 | 8.2 | 91.6 | 0.2 | -1.12 | 1.35 | 0.67 | 0.80 | 1.27 | 8780 | 1130 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P9U | 13266 | 2023-04-20 | 2021-07-28 | 3.7 | 3.88 | 3.67 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 14.10 | 0.00 | 2.188 | 11.55 | 0.00 | 6.8 | 92.8 | 0.4 | 1.01 | 0.51 | 0.75 | 1.02 | 3.8 | 0.003 | 0.77 | 0.0 | 0.04 | 16.17 | 0.00 | 2.152 | 13.54 | 0.93 | 6.6 | 93.2 | 0.2 | 0.53 | 0.41 | 0.52 | 0.75 | 0.80 | 3943 | 503 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SY7 | 25519 | 2023-04-28 | 2021-11-24 | 2.81 | 3.86 | — | 3.0 | 0.005 | 0.82 | 0.0 | 0.06 | 13.28 | 0.01 | 2.281 | 3.29 | 0.00 | 2.0 | 98.0 | 0.0 | -0.05 | 0.86 | 0.83 | 2.20 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 14.59 | 0.00 | 2.160 | 8.74 | 0.78 | 2.0 | 98.0 | 0.0 | 0.99 | 1.18 | 0.87 | 0.85 | 2.06 | 28581 | 3517 | 26 | 0 | 64 | 0 | 0 | logfile |
✔ | 7SXZ | 25511 | 2023-04-28 | 2021-11-24 | 2.61 | 3.54 | — | 2.9 | 0.005 | 0.82 | 0.0 | 0.06 | 13.28 | 0.01 | 2.280 | 3.23 | 0.00 | 2.0 | 98.0 | 0.0 | -0.12 | 0.83 | 0.83 | 2.27 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 14.89 | 0.00 | 2.186 | 8.54 | 0.49 | 2.1 | 97.9 | 0.0 | 0.85 | 1.20 | 0.83 | 0.84 | 2.52 | 28583 | 3517 | 26 | 0 | 64 | 0 | 0 | logfile |