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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8DWU | 27760 | 2024-03-18 | 2022-08-02 | 3.4 | 4.26 | 3.39 | 3.3 | 0.005 | 1.26 | 5.0 | 0.06 | 14.46 | 0.01 | 2.223 | 5.38 | 0.14 | 7.2 | 92.3 | 0.5 | -1.91 | 0.71 | 0.59 | 1.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19690 | 2506 | 13 | 0 | 0 | 8 | 0 | logfile |
✘ | 7RGQ | 24454 | 2024-03-11 | 2021-07-15 | 3.9 | 3.65 | — | 3.7 | 0.013 | 1.98 | 9.0 | 0.09 | 19.50 | 0.01 | 2.357 | 2.12 | 2.74 | 6.9 | 92.4 | 0.7 | -1.98 | 0.56 | 0.81 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 59832 | 3848 | 16 | 0 | 40 | 0 | 29544 | logfile |
✘ | 7UVX | 26819 | 2024-03-17 | 2022-05-02 | 2.35 | 2.56 | — | 2.4 | 0.005 | 0.61 | 0.0 | 0.04 | 23.01 | 0.02 | 2.144 | 4.47 | 2.57 | 2.3 | 97.5 | 0.2 | 0.69 | 0.91 | 0.91 | 3.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 136470 | 5510 | 53 | 4358 | 2 | 0 | 0 | logfile |
✘ | 6XZG | 10662 | 2024-03-13 | 2020-02-04 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7MHS | 23835 | 2024-03-18 | 2021-04-15 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21148 | 2652 | 11 | 0 | 48 | 0 | 0 | logfile |
✘ | 6L4U | 0835 | 2024-03-12 | 2019-10-21 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62199 | 5075 | 72 | 0 | 557 | 156 | 0 | logfile |
✘ | 7D1U | 30548 | 2024-03-26 | 2020-09-15 | 2.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✘ | 6ZKC | 11244 | 2024-03-14 | 2020-06-30 | 3.1 | 3.23 | — | 3.2 | 0.008 | 1.02 | 0.0 | 1.02 | 12.40 | 0.01 | 2.216 | 5.53 | 0.10 | 4.2 | 95.8 | 0.0 | -3.11 | 0.66 | 0.83 | 3.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67967 | 8227 | 71 | 0 | 45 | 0 | 0 | logfile |
✘ | 8E4L | 27891 | 2024-03-11 | 2022-08-18 | 3.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 54556 | 3592 | 8 | 0 | 16 | 0 | 26580 | logfile |
✘ | 6A96 | 6998 | 2024-03-17 | 2018-07-11 | 3.51 | 4.46 | — | 4.3 | 0.008 | 1.02 | 0.0 | 0.06 | 16.06 | 0.01 | 2.158 | 6.24 | 0.22 | 7.3 | 92.7 | 0.0 | -3.71 | 0.74 | 0.77 | 1.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17049 | 2043 | 19 | 0 | 44 | 0 | 0 | logfile |
✘ | 6SML | 10243 | 2024-03-24 | 2019-08-22 | 3.4 | 3.43 | — | 3.4 | 0.009 | 1.02 | 0.0 | 0.06 | 14.67 | 0.01 | 2.243 | 3.62 | 0.09 | 6.7 | 93.3 | 0.1 | -3.42 | 0.74 | 0.83 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22152 | 2810 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7VD5 | 31905 | 2024-03-20 | 2021-09-06 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 100884 | 9450 | 143 | 0 | 670 | 52 | 0 | logfile |
✘ | 7VZG | 32228 | 2024-03-18 | 2021-11-16 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22458 | 2402 | 25 | 0 | 119 | 6 | 0 | logfile |
✘ | 6JEo | 9807 | 2024-03-19 | 2019-02-06 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94576 | 8774 | 88 | 0 | 504 | 0 | 0 | logfile |
✘ | 6VL5 | 21230 | 2024-03-16 | 2020-01-22 | 4.5 | 4.57 | 4.20 | 4.4 | 0.019 | 1.72 | 0.0 | 0.10 | 11.99 | 0.01 | 2.242 | 0.64 | 0.20 | 1.2 | 98.8 | 0.0 | 0.88 | 0.79 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15039 | 1719 | 42 | 0 | 105 | 0 | 0 | logfile |
✘ | 7D5i | 30582 | 2024-03-11 | 2020-09-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6232 | 793 | 3 | 0 | 3 | 0 | 0 | logfile |
✘ | 8EAK | 27979 | 2024-03-19 | 2022-08-29 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24218 | 3008 | 17 | 9 | 14 | 12 | 0 | logfile |
✘ | 6K33 | 9908 | 2024-03-18 | 2019-05-16 | 2.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 137634 | 12681 | 112 | 0 | 759 | 21 | 0 | logfile |
✘ | 7PD3 | 13329 | 2024-03-10 | 2021-08-04 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 108076 | 9276 | 76 | 1522 | 125 | 0 | 0 | logfile |
✘ | 7SCJ | 25036 | 2024-03-14 | 2021-09-28 | 3.4 | 2.31 | 2.97 | 2.0 | 0.004 | 0.60 | 0.0 | 0.05 | 14.79 | 0.01 | 2.200 | 9.22 | 0.00 | 5.7 | 94.3 | 0.0 | -0.25 | 0.75 | 0.72 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9336 | 1131 | 6 | 2 | 7 | 0 | 0 | logfile |