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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6LMK | 0917 | 2023-12-08 | 2019-12-26 | 3.7 | 3.89 | — | 3.8 | 0.009 | 0.96 | 0.0 | 0.06 | 15.10 | 0.01 | 2.283 | 7.02 | 0.62 | 6.5 | 93.5 | 0.0 | -4.19 | 0.68 | 0.82 | 1.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9240 | 1178 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7W7F | 32343 | 2023-12-10 | 2021-12-04 | 3.35 | 3.74 | — | 3.7 | 0.015 | 1.03 | 0.0 | 0.07 | 18.40 | 0.01 | 2.144 | 13.75 | 0.31 | 8.1 | 91.6 | 0.3 | -1.42 | 0.42 | 0.74 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11987 | 1424 | 7 | 0 | 29 | 0 | 0 | logfile |
✘ | 8FHD | 29082 | 2023-12-09 | 2022-12-14 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12686 | 1467 | 6 | 0 | 35 | 0 | 0 | logfile |
✘ | 8DCX | 27330 | 2023-12-09 | 2022-06-17 | 2.8 | 3.32 | 3.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.71 | 0.00 | 2.195 | 13.47 | 0.00 | 5.4 | 94.6 | 0.1 | -0.04 | 0.48 | 0.60 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9627 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EJ8 | 31156 | 2023-12-08 | 2021-04-01 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8647 | 1100 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 3JAF | 6346 | 2023-12-10 | 2015-06-08 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13865 | 1710 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 7RR9 | 24656 | 2023-12-08 | 2021-08-09 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9094 | 1120 | 4 | 0 | 8 | 0 | 0 | logfile |
✘ | 7TJ9 | 25920 | 2023-12-09 | 2022-01-14 | 2.9 | 3.19 | — | 3.1 | 0.017 | 1.02 | 0.0 | 0.06 | 18.48 | 0.01 | 2.167 | 6.06 | 0.09 | 5.0 | 95.0 | 0.0 | 0.12 | 0.56 | 0.82 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10975 | 1273 | 5 | 0 | 24 | 0 | 0 | logfile |
✘ | 6VM2 | 21236 | 2023-12-10 | 2020-01-27 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15355 | 1815 | 15 | 0 | 20 | 0 | 0 | logfile |
✘ | 7ZDB | 14640 | 2023-12-08 | 2022-03-29 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8803 | 1122 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7CH8 | 30371 | 2023-12-11 | 2020-07-05 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16213 | 2122 | 17 | 0 | 12 | 0 | 0 | logfile |
✘ | 6X2L | 22011 | 2023-12-08 | 2020-05-20 | 2.85 | 2.95 | — | 2.9 | 0.009 | 0.96 | 0.0 | 0.06 | 13.68 | 0.01 | 2.078 | 2.99 | 0.00 | 2.5 | 97.5 | 0.0 | -6.46 | 0.64 | 0.88 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9396 | 1233 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7VKT | 32018 | 2023-12-08 | 2021-10-01 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9100 | 1143 | 6 | 0 | 6 | 7 | 0 | logfile |
✘ | 7EUo | 31323 | 2023-12-08 | 2021-05-18 | 2.9 | 3.61 | 2.97 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 13.72 | 0.00 | 2.198 | 6.82 | 0.00 | 4.3 | 95.7 | 0.0 | -0.21 | 0.63 | 0.82 | 3.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8950 | 1138 | 7 | 0 | 2 | 0 | 0 | logfile |
✘ | 7Z10 | 14436 | 2023-12-09 | 2022-02-24 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12574 | 1556 | 13 | 0 | 9 | 0 | 0 | logfile |
✔ | 7EZ2 | 31386 | 2023-12-08 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 22.16 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.007 | 0.85 | 0.0 | 0.05 | 22.67 | 0.01 | 1.764 | 7.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.03 | 0.74 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 8HD7 | 34671 | 2023-12-08 | 2022-11-03 | 3.52 | 3.99 | 3.58 | 3.3 | 0.003 | 0.60 | 0.0 | 0.03 | 22.34 | 0.00 | 1.927 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.77 | — | 3.3 | 0.008 | 0.81 | 0.0 | 0.05 | 22.88 | 0.01 | 1.785 | 16.76 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.52 | 0.91 | 0.84 | — | 8983 | 0 | 1 | 419 | 28 | 0 | 0 | logfile |
✘ | 7KHR | 22880 | 2023-12-09 | 2020-10-21 | 3.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 61913 | 8212 | 44 | 0 | 36 | 0 | 0 | logfile |
✘ | 6KPi | 0747 | 2023-12-09 | 2019-08-15 | 2.43 | 3.50 | — | 3.0 | 0.008 | 0.67 | 0.0 | 0.06 | 11.99 | 0.00 | 1.974 | 5.19 | 0.00 | 7.1 | 92.9 | 0.0 | -4.39 | 0.85 | 0.88 | 4.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✘ | 6DZV | 8940 | 2023-12-08 | 2018-07-05 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6121 | 765 | 5 | 0 | 4 | 0 | 0 | logfile |