The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8SRo | 40736 | 2023-12-07 | 2023-05-05 | 3.3 | 3.43 | 3.26 | 3.4 | 0.003 | 0.56 | 0.0 | 0.03 | 26.26 | 0.02 | 2.348 | 8.41 | 0.90 | 5.3 | 94.7 | 0.0 | -1.78 | 0.66 | 0.78 | 3.49 | 3.4 | 0.005 | 0.62 | 0.0 | 0.04 | 25.86 | 0.00 | 2.354 | 9.23 | 0.00 | 7.7 | 92.3 | 0.0 | -1.09 | 0.91 | 0.65 | 0.79 | 2.83 | 4132 | 345 | 8 | 72 | 0 | 0 | 0 | logfile |
✔ | 7Y5W | 33627 | 2023-12-08 | 2022-06-17 | 3.5 | 4.54 | 3.56 | 3.7 | 0.003 | 0.53 | 0.0 | 0.03 | 27.56 | 0.00 | 2.102 | 12.41 | 0.00 | 2.0 | 98.0 | 0.0 | 2.53 | 0.81 | 0.70 | 0.94 | 3.7 | 0.005 | 0.89 | 0.0 | 0.04 | 28.80 | 0.01 | 2.073 | 22.52 | 0.00 | 2.5 | 97.5 | 0.0 | 0.74 | 1.38 | 0.90 | 0.85 | 0.70 | 8811 | 579 | 10 | 202 | 0 | 0 | 0 | logfile |
✔ | 8E43 | 27878 | 2023-12-09 | 2022-08-17 | 2.09 | 2.88 | 2.49 | 2.6 | 0.006 | 0.57 | 0.0 | 0.03 | 22.57 | 0.02 | 1.945 | 2.00 | 1.06 | 4.9 | 94.8 | 0.3 | -2.82 | 0.73 | 0.90 | 5.55 | 2.6 | 0.006 | 0.60 | 0.0 | 0.04 | 22.46 | 0.01 | 1.914 | 3.37 | 1.38 | 6.0 | 93.6 | 0.4 | -0.29 | 0.38 | 0.72 | 0.91 | 5.17 | 115905 | 1179 | 11 | 3015 | 1 | 0 | 41874 | logfile |
✔ | 8E32 | 27854 | 2023-12-09 | 2022-08-16 | 2.35 | 2.96 | 2.64 | 2.8 | 0.006 | 0.51 | 0.0 | 0.03 | 22.21 | 0.02 | 2.005 | 1.20 | 0.74 | 4.6 | 95.4 | 0.0 | 0.03 | 0.74 | 0.91 | 5.35 | 2.8 | 0.006 | 0.65 | 0.0 | 0.04 | 22.09 | 0.01 | 1.957 | 1.76 | 1.27 | 5.7 | 94.3 | 0.0 | -0.67 | 0.26 | 0.70 | 0.90 | 5.49 | 115899 | 1179 | 11 | 3016 | 2 | 1 | 41852 | logfile |
✔ | 6XMF | 22257 | 2023-12-08 | 2020-06-30 | 3.1 | 3.28 | — | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 20.61 | 0.00 | 2.246 | 8.60 | 0.00 | 6.8 | 93.2 | 0.0 | -1.78 | 0.68 | 0.71 | 2.25 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 21.22 | 0.00 | 2.154 | 15.41 | 0.60 | 9.1 | 90.9 | 0.0 | -0.47 | 0.47 | 0.71 | 0.76 | 2.75 | 7382 | 627 | 3 | 109 | 1 | 0 | 0 | logfile |
✔ | 7LQF | 23484 | 2023-12-07 | 2021-02-13 | 3.8 | 3.13 | — | 4.0 | 0.016 | 1.46 | 0.0 | 0.03 | 18.37 | 0.00 | 2.258 | 22.81 | 2.08 | 0.0 | 100.0 | 0.0 | -4.77 | 0.59 | 0.78 | 4.63 | 3.2 | 0.154 | 6.37 | 244.0 | 0.42 | 26.01 | 0.03 | 1.685 | 217.72 | 5.21 | 66.8 | 30.1 | 3.1 | -9.48 | 1.76 | 0.69 | 0.86 | 2.78 | 5376 | 512 | 64 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SRP | 40737 | 2023-12-09 | 2023-05-05 | 3.7 | 3.93 | 3.67 | 3.7 | 0.004 | 0.66 | 0.0 | 0.03 | 28.75 | 0.01 | 2.262 | 9.34 | 0.47 | 6.5 | 93.5 | 0.0 | -1.47 | 0.74 | 0.72 | 2.00 | 3.7 | 0.003 | 0.62 | 0.0 | 0.03 | 28.34 | 0.00 | 2.203 | 10.19 | 1.40 | 6.9 | 93.1 | 0.0 | -0.18 | 0.91 | 0.74 | 0.71 | 2.45 | 9516 | 849 | 14 | 214 | 0 | 0 | 0 | logfile |
✔ | 8FTi | 29433 | 2023-12-08 | 2023-01-12 | 3.5 | 3.80 | 3.64 | 3.7 | 0.002 | 0.56 | 0.0 | 0.03 | 17.21 | 0.00 | 2.237 | 9.26 | 4.55 | 4.5 | 95.5 | 0.0 | 0.23 | 0.77 | 0.75 | 2.02 | 3.7 | 0.002 | 0.57 | 0.0 | 0.03 | 18.20 | 0.00 | 2.176 | 10.77 | 0.16 | 4.9 | 95.1 | 0.0 | 0.60 | 0.97 | 0.76 | 0.76 | 1.95 | 8126 | 737 | 2 | 97 | 0 | 0 | 0 | logfile |
✔ | 8EDL | 28035 | 2023-12-07 | 2022-09-05 | 3.7 | 3.30 | 3.60 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 11.07 | 0.00 | 2.307 | 6.09 | 0.00 | 2.1 | 97.7 | 0.3 | 2.83 | 0.62 | 0.61 | -0.09 | 3.1 | 0.002 | 0.56 | 0.0 | 0.03 | 13.69 | 0.00 | 2.346 | 6.09 | 0.00 | 3.1 | 96.9 | 0.0 | 3.49 | 1.16 | 0.68 | 0.73 | 2.92 | 2470 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QSM | 18636 | 2023-12-07 | 2023-10-10 | 3.69 | 4.23 | 3.52 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 10.37 | 0.00 | 2.269 | 4.15 | 3.75 | 3.5 | 96.5 | 0.0 | 2.22 | 0.55 | 0.76 | 0.70 | 4.0 | 0.004 | 0.89 | 0.0 | 0.04 | 15.29 | 0.00 | 2.233 | 13.82 | 0.27 | 3.7 | 96.3 | 0.0 | 1.68 | 1.84 | 0.56 | 0.77 | 1.37 | 3579 | 464 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X58 | 33011 | 2023-12-09 | 2022-03-04 | 3.93 | 4.15 | — | 3.9 | 0.003 | 0.56 | 0.0 | 0.03 | 27.06 | 0.00 | 2.221 | 7.16 | 0.00 | 0.9 | 99.1 | 0.0 | 0.68 | 0.86 | 0.80 | 1.58 | 3.9 | 0.004 | 0.73 | 0.0 | 0.04 | 29.31 | 0.00 | 2.205 | 15.18 | 1.19 | 2.8 | 97.2 | 0.0 | 2.20 | 1.38 | 0.88 | 0.83 | 0.58 | 9775 | 596 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7YoZ | 33991 | 2023-12-09 | 2022-08-02 | 4.3 | 4.57 | 4.38 | 4.3 | 0.003 | 0.55 | 0.0 | 0.03 | 27.41 | 0.00 | 2.269 | 6.78 | 0.00 | 1.4 | 98.6 | 0.0 | 0.64 | 0.85 | 0.72 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.04 | 29.27 | 0.00 | 2.063 | 19.38 | 0.00 | 1.6 | 98.4 | 0.0 | 0.58 | 1.79 | 0.89 | 0.83 | — | 9752 | 594 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 8H1J | 34428 | 2023-12-07 | 2022-10-03 | 3.1 | 3.36 | 3.20 | 3.3 | 0.005 | 0.53 | 0.0 | 0.03 | 21.48 | 0.00 | 2.232 | 8.41 | 5.19 | 1.7 | 98.3 | 0.0 | 2.19 | 0.62 | 0.67 | 2.02 | 3.3 | 0.003 | 0.50 | 0.0 | 0.03 | 21.60 | 0.00 | 2.177 | 7.53 | 0.65 | 2.2 | 97.8 | 0.0 | 1.57 | 0.61 | 0.71 | 0.78 | 2.01 | 5773 | 362 | 5 | 134 | 1 | 0 | 0 | logfile |
✔ | 7Yi1 | 33848 | 2023-12-10 | 2022-07-14 | 2.8 | 2.41 | 2.78 | 2.6 | 0.003 | 0.57 | 0.0 | 0.03 | 26.98 | 0.00 | 2.155 | 7.30 | 0.37 | 1.9 | 98.1 | 0.0 | 0.11 | 0.81 | 0.84 | 2.94 | 2.6 | 0.004 | 0.59 | 0.0 | 0.04 | 27.52 | 0.00 | 2.184 | 7.14 | 1.36 | 2.1 | 97.9 | 0.0 | 1.43 | 0.24 | 0.81 | 0.86 | 2.60 | 13926 | 967 | 12 | 302 | 0 | 0 | 0 | logfile |
✔ | 6NTS | 0510 | 2023-12-09 | 2019-01-30 | 3.63 | 4.31 | 2.98 | 3.6 | 0.016 | 0.51 | 0.0 | 0.03 | 13.24 | 0.00 | 1.917 | 2.06 | 0.00 | 3.8 | 96.2 | 0.0 | -2.08 | 0.89 | 0.77 | 0.59 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 15.03 | 0.00 | 2.090 | 8.58 | 0.09 | 2.4 | 97.6 | 0.0 | 0.74 | 2.30 | 0.92 | 0.85 | 1.21 | 9956 | 1240 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 8CZi | 27098 | 2023-12-07 | 2022-05-24 | 2.22 | 2.26 | 2.61 | 2.0 | 0.004 | 0.33 | 0.0 | 0.03 | 14.48 | 0.00 | 2.382 | 6.62 | 0.00 | 0.0 | 100.0 | 0.0 | 2.90 | 0.78 | 0.80 | 1.97 | 2.0 | 0.004 | 0.39 | 0.0 | 0.03 | 15.18 | 0.00 | 2.140 | 5.65 | 0.34 | 0.0 | 100.0 | 0.0 | 5.55 | 0.85 | 0.83 | 0.84 | 1.84 | 2550 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZV | 24779 | 2023-12-07 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.37 | 0.0 | 0.03 | 15.99 | 0.00 | 2.228 | 4.86 | 0.67 | 0.0 | 100.0 | 0.0 | 5.66 | 0.87 | 0.83 | 0.83 | 1.88 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WCC | 21606 | 2023-12-09 | 2020-03-30 | 3.24 | 3.27 | — | 3.3 | 0.003 | 0.51 | 0.0 | 0.03 | 15.73 | 0.00 | 2.025 | 4.39 | 2.26 | 0.8 | 99.2 | 0.0 | 1.46 | 0.53 | 0.76 | 1.58 | 3.3 | 0.003 | 0.53 | 0.0 | 0.03 | 15.71 | 0.00 | 2.212 | 6.63 | 0.16 | 2.6 | 97.4 | 0.0 | 4.28 | 0.73 | 0.51 | 0.78 | 2.04 | 11629 | 734 | 6 | 0 | 5 | 12 | 5908 | logfile |
✔ | 7LQi | 23487 | 2023-12-08 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.77 | 3.33 | 46.5 | 53.5 | 0.0 | -7.05 | 1.54 | 0.65 | 0.83 | 2.52 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PoE | 17789 | 2023-12-09 | 2023-07-04 | 4.2 | 4.40 | 4.17 | 4.5 | 0.003 | 0.64 | 0.0 | 0.04 | 14.20 | 0.00 | 2.265 | 9.34 | 0.00 | 2.8 | 97.2 | 0.0 | 1.48 | 0.57 | 0.71 | — | 4.4 | 0.002 | 0.60 | 0.0 | 0.04 | 14.41 | 0.00 | 2.285 | 7.49 | 0.09 | 2.6 | 97.4 | 0.0 | 1.55 | 1.58 | 0.57 | 0.72 | — | 10947 | 1371 | 3 | 0 | 0 | 0 | 0 | logfile |