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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D6X | 27225 | 2024-03-15 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.76 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.64 | 0.0 | 0.04 | 14.47 | 0.00 | 2.075 | 23.67 | 1.42 | 4.1 | 95.9 | 0.0 | 0.67 | 4.63 | 0.58 | 0.33 | 0.09 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BCP | 15967 | 2024-03-17 | 2022-10-17 | 3.88 | 3.53 | 3.81 | 3.7 | 0.003 | 0.53 | 0.0 | 0.04 | 17.06 | 0.00 | 2.151 | 10.41 | 0.30 | 3.2 | 96.7 | 0.1 | -0.67 | 0.61 | 0.59 | 0.14 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 17.75 | 0.00 | 2.047 | 12.54 | 4.84 | 3.9 | 96.0 | 0.1 | -0.98 | 2.14 | 0.76 | 0.81 | 2.19 | 18171 | 2337 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9Z | 6315 | 2024-03-03 | 2015-03-27 | 3.6 | 3.80 | — | 3.7 | 0.017 | 2.31 | 171.0 | 0.16 | 24.24 | 0.04 | 2.267 | 1.72 | 3.84 | 7.6 | 89.1 | 3.3 | -2.82 | 0.56 | 0.39 | 0.14 | 3.7 | 0.004 | 0.74 | 1.0 | 0.04 | 23.55 | 0.01 | 1.991 | 17.75 | 3.71 | 9.1 | 90.4 | 0.5 | -2.04 | 2.18 | 0.84 | 0.83 | 0.85 | 156714 | 7125 | 59 | 4717 | 1 | 0 | 0 | logfile |
✔ | 8U81 | 41996 | 2024-03-23 | 2023-09-15 | 3.82 | 4.70 | 3.78 | 2.8 | 0.004 | 0.80 | 0.0 | 0.04 | 17.06 | 0.01 | 2.097 | 15.68 | 0.60 | 5.0 | 94.9 | 0.1 | -1.07 | 0.88 | 0.75 | 0.15 | 2.9 | 0.004 | 0.73 | 0.0 | 0.04 | 17.79 | 0.00 | 2.071 | 25.28 | 2.88 | 5.9 | 94.0 | 0.1 | -0.79 | 0.57 | 0.89 | 0.75 | 0.04 | 37890 | 4770 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H5i | 0140 | 2024-03-10 | 2018-07-24 | 3.9 | 3.87 | — | 23.0 | 0.006 | 0.81 | 0.0 | 0.05 | 10.47 | 0.01 | 2.196 | 2.64 | 0.17 | 4.3 | 95.7 | 0.0 | -1.74 | 0.29 | 0.06 | 0.15 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.27 | 0.00 | 2.073 | 14.15 | 1.77 | 3.2 | 96.8 | 0.0 | 1.17 | 1.26 | 0.37 | 0.25 | 0.10 | 43900 | 5392 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 5X59 | 6704 | 2024-03-20 | 2017-02-15 | 3.7 | 3.77 | — | 3.7 | 0.011 | 1.66 | 0.0 | 0.08 | 15.22 | 0.01 | 1.477 | 23.24 | 4.97 | 13.2 | 85.4 | 1.3 | -3.87 | 0.48 | 0.41 | 0.15 | 3.7 | 0.005 | 1.17 | 3.0 | 0.05 | 15.32 | 0.01 | 2.038 | 21.29 | 2.09 | 12.4 | 87.4 | 0.2 | -2.29 | 1.53 | 0.58 | 0.62 | 1.18 | 26838 | 3423 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7ZPJ | 14855 | 2024-03-19 | 2022-04-27 | 3.81 | 3.24 | 3.86 | 6.5 | 0.004 | 0.86 | 0.0 | 0.05 | 15.40 | 0.01 | 2.159 | 2.94 | 0.67 | 3.3 | 96.7 | 0.0 | 0.22 | 0.54 | 0.33 | 0.15 | 2.9 | 0.003 | 0.64 | 0.0 | 0.04 | 17.29 | 0.01 | 1.980 | 12.22 | 2.33 | 4.5 | 95.5 | 0.0 | 0.29 | 1.48 | 0.64 | 0.57 | 0.40 | 23479 | 1355 | 3 | 55 | 0 | 0 | 11508 | logfile |
✔ | 7RTU | 24689 | 2024-03-10 | 2021-08-15 | 3.89 | 4.06 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 20.84 | 0.00 | 2.175 | 7.11 | 0.16 | 3.1 | 96.9 | 0.0 | 4.32 | 0.55 | 0.69 | 0.15 | 4.1 | 0.004 | 0.61 | 0.0 | 0.04 | 16.11 | 0.00 | 2.177 | 6.86 | 2.83 | 2.8 | 97.2 | 0.0 | 4.01 | 0.32 | 0.62 | 0.73 | 0.38 | 5962 | 754 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 4V91 | 2599 | 2024-03-15 | 2014-03-21 | 3.7 | 3.84 | — | 3.8 | 0.133 | 4.77 | 525.0 | 0.43 | 25.54 | 0.07 | 0.695 | 17.94 | 12.79 | 14.1 | 78.2 | 7.8 | -5.39 | 0.33 | 0.36 | 0.15 | 3.8 | 0.042 | 1.66 | 0.0 | 0.05 | 23.19 | 0.02 | 1.926 | 18.85 | 3.11 | 9.9 | 89.3 | 0.8 | -2.99 | 2.00 | 0.63 | 0.82 | 1.46 | 125665 | 6450 | 45 | 3482 | 0 | 0 | 0 | logfile |
✔ | 5L3P | 4001 | 2024-03-26 | 2016-05-24 | 3.7 | 4.66 | — | 16.0 | 0.006 | 0.60 | 0.0 | 0.19 | 22.20 | 0.02 | 2.115 | 7.18 | 0.00 | 8.2 | 89.4 | 2.4 | -1.95 | 0.44 | 0.11 | 0.16 | 3.9 | 0.005 | 0.99 | 2.0 | 0.04 | 24.17 | 0.01 | 1.748 | 42.81 | 1.76 | 10.4 | 89.0 | 0.6 | -2.39 | 2.18 | 0.66 | 0.42 | -0.25 | 149606 | 6419 | 58 | 4704 | 76 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2024-03-20 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 24.37 | 0.01 | 0.154 | 55.29 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.15 | 6.0 | 0.05 | 24.09 | 0.01 | 1.282 | 34.98 | 8.65 | 25.0 | 72.2 | 2.9 | -4.91 | 1.31 | 0.80 | 0.77 | 0.18 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 8U84 | 42008 | 2024-03-23 | 2023-09-15 | 3.88 | 4.89 | 3.87 | 2.9 | 0.004 | 0.84 | 0.0 | 0.05 | 16.82 | 0.01 | 2.125 | 14.34 | 0.62 | 5.2 | 94.5 | 0.3 | -0.92 | 0.90 | 0.75 | 0.16 | 2.8 | 0.004 | 0.75 | 0.0 | 0.04 | 17.42 | 0.00 | 2.069 | 25.04 | 2.83 | 6.2 | 93.8 | 0.1 | -0.54 | 1.21 | 0.90 | 0.78 | 0.04 | 37885 | 4770 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LiV | 23386 | 2024-03-25 | 2021-01-28 | 3.6 | 3.63 | — | 3.6 | 0.009 | 0.95 | 1.0 | 0.05 | 13.49 | 0.01 | 1.080 | 26.90 | 2.97 | 4.9 | 94.5 | 0.6 | -3.03 | 0.24 | 0.49 | 0.16 | 3.7 | 0.004 | 0.82 | 1.0 | 0.04 | 17.08 | 0.00 | 1.707 | 15.62 | 3.09 | 4.6 | 95.4 | 0.1 | -0.69 | 1.63 | 0.39 | 0.80 | 1.13 | 47058 | 5903 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JCE | 6550 | 2024-03-02 | 2015-12-01 | 3.2 | 4.36 | — | 14.0 | 0.008 | 0.88 | 0.0 | 0.04 | 22.68 | 0.00 | 1.106 | 32.64 | 0.47 | 10.4 | 84.8 | 4.8 | -2.93 | 0.33 | 0.04 | 0.16 | 3.1 | 0.006 | 1.17 | 5.0 | 0.05 | 25.14 | 0.01 | 1.590 | 49.53 | 2.65 | 13.3 | 85.5 | 1.2 | -3.72 | 1.89 | 0.70 | 0.41 | 0.15 | 154017 | 6546 | 59 | 4798 | 2 | 0 | 0 | logfile |
✔ | 7QG8 | 13952 | 2024-03-25 | 2021-12-07 | 3.97 | 7.71 | — | 4.0 | 0.016 | 1.62 | 61.0 | 0.11 | 22.93 | 0.01 | 0.770 | 4.86 | 1.61 | 8.6 | 90.4 | 1.0 | -3.97 | 0.64 | 0.40 | 0.16 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 24.56 | 0.01 | 1.902 | 35.77 | 2.68 | 10.2 | 89.7 | 0.1 | -2.28 | 3.35 | 0.84 | 0.76 | -0.02 | 147108 | 5936 | 58 | 4695 | 3 | 9 | 0 | logfile |
✔ | 7Q5R | 13845 | 2024-03-19 | 2021-11-04 | 3.84 | 4.21 | 3.98 | 4.1 | 0.006 | 0.93 | 0.0 | 0.07 | 10.54 | 0.00 | 2.365 | 4.40 | 0.57 | 1.9 | 98.1 | 0.0 | 0.17 | 0.71 | 0.58 | 0.16 | 4.1 | 0.004 | 0.81 | 2.0 | 0.05 | 14.95 | 0.01 | 1.776 | 15.55 | 2.77 | 1.5 | 98.5 | 0.0 | 1.20 | 3.75 | 0.81 | 0.85 | 1.45 | 95520 | 12600 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YBL | 33725 | 2024-03-20 | 2022-06-29 | 3.6 | 3.80 | 3.54 | 3.7 | 0.006 | 0.96 | 0.0 | 0.05 | 16.19 | 0.01 | 1.819 | 13.99 | 0.60 | 5.8 | 94.0 | 0.2 | -0.98 | 0.59 | 0.50 | 0.16 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 14.35 | 0.00 | 2.071 | 11.09 | 2.22 | 5.0 | 94.9 | 0.1 | -0.64 | 1.57 | 0.71 | 0.71 | 1.23 | 26819 | 3234 | 39 | 0 | 112 | 0 | 0 | logfile |
✔ | 7W0C | 32238 | 2024-03-16 | 2021-11-18 | 3.93 | 4.02 | — | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 16.22 | 0.00 | 2.105 | 14.31 | 0.07 | 4.2 | 95.8 | 0.1 | -0.14 | 0.86 | 0.73 | 0.17 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 17.30 | 0.00 | 2.166 | 15.17 | 1.27 | 4.2 | 95.7 | 0.1 | -0.01 | 0.43 | 0.86 | 0.74 | 0.39 | 13663 | 1492 | 5 | 72 | 2 | 0 | 0 | logfile |
✔ | 6EU3 | 3958 | 2024-03-23 | 2017-10-27 | 3.3 | 3.38 | — | 6.0 | 0.004 | 1.06 | 0.0 | 0.06 | 11.41 | 0.01 | 1.167 | 5.05 | 0.26 | 12.9 | 86.6 | 0.5 | -5.18 | 0.23 | 0.03 | 0.17 | 3.3 | 0.003 | 0.81 | 0.0 | 0.04 | 15.10 | 0.00 | 2.016 | 13.52 | 2.04 | 11.5 | 88.3 | 0.3 | -2.44 | 1.48 | 0.54 | 0.49 | 0.40 | 38330 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 6EU2 | 3957 | 2024-03-23 | 2017-10-27 | 3.4 | 3.45 | — | 6.0 | 0.004 | 1.04 | 0.0 | 0.06 | 11.35 | 0.01 | 1.787 | 5.04 | 0.40 | 13.0 | 86.5 | 0.5 | -5.22 | 0.27 | 0.04 | 0.18 | 3.4 | 0.006 | 1.00 | 2.0 | 0.05 | 15.52 | 0.01 | 1.818 | 17.85 | 2.02 | 11.9 | 87.8 | 0.3 | -2.67 | 1.60 | 0.61 | 0.58 | 0.33 | 38329 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |