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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LML | 0918 | 2023-09-29 | 2019-12-26 | 3.9 | 4.02 | — | 3.9 | 0.006 | 0.96 | 0.0 | 0.06 | 15.40 | 0.01 | 2.260 | 7.25 | 0.51 | 8.8 | 91.2 | 0.0 | -5.53 | 0.69 | 0.80 | 1.70 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 16.55 | 0.00 | 2.129 | 13.32 | 0.51 | 6.9 | 93.1 | 0.0 | -2.01 | 1.05 | 0.69 | 0.79 | 0.98 | 9438 | 1219 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LMW | 0922 | 2023-09-30 | 2019-12-26 | 3.4 | 3.55 | 3.21 | 3.5 | 0.007 | 0.91 | 0.0 | 0.05 | 15.33 | 0.01 | 2.292 | 2.21 | 0.63 | 1.6 | 98.4 | 0.0 | -5.34 | 0.53 | 0.73 | 3.03 | 3.5 | 0.002 | 0.63 | 0.0 | 0.04 | 16.35 | 0.00 | 2.228 | 5.83 | 1.18 | 1.1 | 98.9 | 0.0 | 2.21 | 0.44 | 0.66 | 0.83 | 2.32 | 11624 | 1472 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LN5 | 0924 | 2023-09-28 | 2019-12-28 | 2.8 | 2.93 | 2.78 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 12.32 | 0.00 | 2.027 | 5.32 | 0.12 | 2.0 | 98.0 | 0.0 | -4.16 | 0.68 | 0.83 | 3.56 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.29 | 0.00 | 2.241 | 5.89 | 1.97 | 1.7 | 98.3 | 0.0 | 0.73 | 1.33 | 0.68 | 0.85 | 3.01 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LN6 | 0925 | 2023-09-28 | 2019-12-28 | 2.9 | 3.03 | 2.87 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 11.98 | 0.00 | 2.035 | 6.53 | 0.00 | 2.0 | 98.0 | 0.0 | -3.94 | 0.65 | 0.82 | 3.55 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 15.73 | 0.00 | 2.055 | 7.86 | 1.74 | 1.4 | 98.6 | 0.0 | 0.61 | 1.33 | 0.65 | 0.83 | 3.33 | 7836 | 1010 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LN7 | 0926 | 2023-09-28 | 2019-12-28 | 2.8 | 2.90 | 2.71 | 2.9 | 0.005 | 0.65 | 0.0 | 0.04 | 11.73 | 0.00 | 2.101 | 5.64 | 0.00 | 2.3 | 97.7 | 0.0 | -3.93 | 0.70 | 0.85 | 3.69 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 16.72 | 0.00 | 2.175 | 6.97 | 1.27 | 2.2 | 97.8 | 0.0 | 0.29 | 0.47 | 0.69 | 0.86 | 2.97 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LN8 | 0927 | 2023-09-28 | 2019-12-28 | 3.1 | 3.26 | 3.33 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 12.81 | 0.00 | 2.051 | 6.74 | 0.00 | 3.0 | 97.0 | 0.0 | -2.71 | 0.70 | 0.80 | 2.37 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 15.08 | 0.00 | 1.381 | 9.56 | 0.12 | 3.1 | 96.9 | 0.0 | 0.11 | 0.48 | 0.69 | 0.82 | 1.70 | 7739 | 1003 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6LN9 | 0928 | 2023-09-28 | 2019-12-28 | 3.4 | 3.61 | 3.06 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 12.32 | 0.00 | 2.075 | 7.70 | 0.00 | 4.1 | 95.9 | 0.0 | -3.36 | 0.63 | 0.73 | 1.41 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.72 | 0.00 | 1.333 | 10.18 | 0.00 | 4.3 | 95.7 | 0.0 | -0.24 | 0.52 | 0.62 | 0.75 | 1.21 | 7612 | 987 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6LNi | 0931 | 2023-09-28 | 2019-12-30 | 2.702 | 2.94 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 14.81 | 0.00 | 2.200 | 10.98 | 0.00 | 12.6 | 87.4 | 0.0 | -6.05 | 0.48 | 0.82 | 5.95 | 2.9 | 0.003 | 0.67 | 0.0 | 0.05 | 19.43 | 0.00 | 2.260 | 10.36 | 1.93 | 11.6 | 88.4 | 0.0 | -3.97 | 1.54 | 0.53 | 0.87 | 5.22 | 4920 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Lo8 | 0935 | 2023-09-28 | 2020-01-04 | 3.83 | 3.89 | — | 3.6 | 0.005 | 0.87 | 0.0 | 0.05 | 14.88 | 0.01 | 2.242 | 5.11 | 0.46 | 3.7 | 96.1 | 0.2 | -3.08 | 0.65 | 0.79 | 1.72 | 3.6 | 0.004 | 0.83 | 0.0 | 0.04 | 17.18 | 0.00 | 2.116 | 14.07 | 0.57 | 5.0 | 95.0 | 0.0 | 1.41 | 0.93 | 0.66 | 0.79 | 1.78 | 7972 | 997 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6LQA | 0942 | 2023-09-29 | 2020-01-13 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9387 | 1151 | 1 | 0 | 10 | 0 | 0 | logfile |
✔ | 6LQG | 0944 | 2023-09-30 | 2020-01-13 | 3.1 | 3.24 | — | 3.2 | 0.007 | 1.08 | 0.0 | 0.06 | 10.33 | 0.01 | 1.552 | 3.77 | 0.27 | 5.0 | 95.0 | 0.0 | -3.57 | 0.65 | 0.84 | 3.55 | 3.2 | 0.008 | 0.78 | 0.0 | 0.05 | 14.61 | 0.00 | 2.070 | 5.60 | 0.71 | 5.5 | 94.5 | 0.0 | -0.20 | 1.20 | 0.64 | 0.87 | 2.88 | 10855 | 1315 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 6LR4 | 0957 | 2023-09-30 | 2020-01-15 | 3.0 | 3.16 | — | 3.1 | 0.011 | 1.00 | 0.0 | 0.06 | 10.34 | 0.01 | 2.289 | 2.99 | 0.09 | 5.8 | 94.2 | 0.0 | -3.96 | 0.64 | 0.84 | 4.36 | 3.1 | 0.005 | 0.68 | 0.0 | 0.04 | 15.05 | 0.00 | 2.185 | 5.33 | 1.95 | 5.3 | 94.7 | 0.0 | 0.02 | 0.54 | 0.67 | 0.87 | 2.81 | 10838 | 1314 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 6LRQ | 0958 | 2023-09-27 | 2020-01-16 | 3.49 | 3.59 | — | 4.0 | 0.009 | 0.85 | 0.0 | 0.05 | 11.88 | 0.00 | 2.205 | 20.30 | 0.00 | 14.8 | 85.2 | 0.0 | -4.51 | 0.46 | 0.71 | 1.87 | 3.6 | 0.003 | 0.70 | 0.0 | 0.05 | 15.02 | 0.00 | 2.237 | 12.85 | 0.37 | 8.2 | 91.8 | 0.0 | -2.72 | 0.95 | 0.45 | 0.69 | 1.94 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RVX | 10016 | 2023-09-29 | 2019-06-03 | 3.61 | 3.75 | 3.53 | 3.8 | 0.006 | 0.99 | 0.0 | 0.05 | 14.07 | 0.01 | 2.261 | 5.00 | 0.29 | 8.0 | 92.0 | 0.0 | -5.46 | 0.65 | 0.80 | 1.54 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 15.28 | 0.00 | 2.179 | 9.45 | 0.39 | 4.5 | 95.5 | 0.0 | -0.63 | 1.14 | 0.63 | 0.79 | 0.97 | 9627 | 1290 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RVY | 10018 | 2023-09-29 | 2019-06-03 | 4.13 | 4.25 | 4.04 | 4.1 | 0.006 | 1.03 | 0.0 | 0.06 | 14.69 | 0.01 | 2.290 | 6.87 | 0.49 | 7.5 | 92.5 | 0.0 | -5.00 | 0.64 | 0.81 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 13.23 | 0.00 | 2.369 | 10.92 | 0.00 | 5.0 | 95.0 | 0.0 | -0.04 | 0.72 | 0.64 | 0.80 | — | 9627 | 1290 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RWE | 10038 | 2023-09-27 | 2019-06-04 | 3.0 | 3.12 | — | 3.7 | 0.009 | 1.02 | 1.0 | 0.06 | 13.12 | 0.01 | 1.975 | 6.33 | 0.73 | 7.4 | 92.5 | 0.1 | -4.84 | 0.44 | 0.32 | 0.00 | 3.1 | 0.004 | 0.82 | 0.0 | 0.05 | 18.58 | 0.00 | 1.992 | 14.06 | 2.87 | 6.5 | 93.5 | 0.0 | -1.41 | 2.49 | 0.76 | 0.80 | 1.68 | 53719 | 6454 | 26 | 95 | 8 | 0 | 0 | logfile |
✘ | 6RX4 | 10049 | 2023-09-28 | 2019-06-07 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7347 | 884 | 8 | 0 | 31 | 7 | 0 | logfile |
✔ | 6S3K | 10092 | 2023-09-29 | 2019-06-25 | 3.7 | 4.09 | 3.85 | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 15.38 | 0.01 | 2.276 | 5.87 | 0.62 | 10.7 | 89.3 | 0.0 | -4.54 | 0.57 | 0.75 | 0.73 | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 16.96 | 0.00 | 2.264 | 10.86 | 0.31 | 7.4 | 92.6 | 0.0 | 0.48 | 1.25 | 0.57 | 0.72 | 0.73 | 8902 | 1146 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6S3Q | 10094 | 2023-09-30 | 2019-06-25 | 3.34 | 3.45 | 3.28 | 3.4 | 0.012 | 1.11 | 0.0 | 0.06 | 13.97 | 0.01 | 2.383 | 2.50 | 0.57 | 4.3 | 95.4 | 0.2 | -4.53 | 0.66 | 0.86 | 2.79 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.10 | 0.00 | 2.273 | 5.05 | 0.00 | 1.9 | 98.1 | 0.0 | 1.38 | 1.15 | 0.62 | 0.84 | 1.62 | 10290 | 1290 | 6 | 0 | 21 | 0 | 0 | logfile |
✘ | 6S5T | 10100 | 2023-09-28 | 2019-07-02 | 4.15 | 4.28 | 4.17 | 4.2 | 0.007 | 1.48 | 3.0 | 0.09 | 17.31 | 0.00 | 2.450 | 5.08 | 3.93 | 7.1 | 92.4 | 0.6 | -4.05 | 0.75 | 0.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6958 | 896 | 3 | 0 | 1 | 0 | 0 | logfile |