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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8GHF | 40044 | 2024-03-22 | 2023-03-10 | 2.7 | 3.20 | 2.86 | 3.2 | 0.002 | 0.60 | 0.0 | 0.04 | 18.87 | 0.01 | 2.321 | 2.83 | 3.45 | 2.4 | 97.6 | 0.0 | -0.85 | 0.70 | 0.88 | 3.69 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 16.82 | 0.00 | 2.225 | 3.60 | 2.59 | 2.9 | 97.1 | 0.0 | 0.06 | 0.30 | 0.61 | 0.84 | 3.87 | 31920 | 3568 | 8 | 0 | 200 | 0 | 0 | logfile |
✔ | 8FL1 | 29264 | 2024-03-17 | 2022-12-21 | 3.75 | 3.87 | 3.78 | 3.9 | 0.005 | 0.68 | 0.0 | 0.05 | 16.10 | 0.00 | 2.259 | 3.93 | 0.00 | 2.5 | 97.5 | 0.0 | 0.22 | 0.77 | 0.79 | 2.27 | 3.9 | 0.003 | 0.63 | 0.0 | 0.05 | 14.96 | 0.00 | 2.132 | 6.90 | 2.54 | 3.5 | 96.5 | 0.0 | -0.01 | 1.30 | 0.79 | 0.81 | 2.02 | 16951 | 1972 | 37 | 0 | 108 | 0 | 0 | logfile |
✔ | 8C5Y | 16444 | 2024-03-21 | 2023-01-10 | 3.35 | 3.63 | 3.46 | 3.6 | 0.004 | 0.71 | 0.0 | 0.05 | 14.44 | 0.00 | 2.111 | 8.14 | 0.18 | 3.4 | 96.3 | 0.3 | 0.01 | 0.70 | 0.75 | 2.46 | 3.6 | 0.004 | 0.61 | 0.0 | 0.05 | 16.36 | 0.00 | 2.180 | 7.85 | 1.72 | 3.9 | 95.9 | 0.2 | 0.14 | 0.47 | 0.73 | 0.84 | 2.08 | 15198 | 1868 | 16 | 0 | 4 | 0 | 0 | logfile |
✔ | 8ATG | 15649 | 2024-03-15 | 2022-08-23 | 2.9 | 3.96 | 3.12 | 3.7 | 0.007 | 0.71 | 0.0 | 0.04 | 18.85 | 0.00 | 2.256 | 13.02 | 0.00 | 7.4 | 92.6 | 0.0 | -1.00 | 0.72 | 0.59 | 2.46 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 18.26 | 0.00 | 2.113 | 10.05 | 2.55 | 5.8 | 94.0 | 0.2 | -0.07 | 0.73 | 0.81 | 0.85 | 2.40 | 12990 | 1555 | 10 | 0 | 25 | 0 | 0 | logfile |
✔ | 8JHY | 36300 | 2024-03-14 | 2023-05-25 | 2.87 | 2.15 | — | 2.8 | 0.007 | 0.96 | 0.0 | 0.05 | 13.90 | 0.01 | 2.078 | 10.20 | 0.00 | 5.7 | 94.3 | 0.0 | -2.25 | 0.75 | 0.77 | 3.68 | 1.9 | 0.004 | 0.70 | 0.0 | 0.05 | 15.90 | 0.00 | 2.084 | 7.59 | 2.54 | 4.7 | 95.3 | 0.0 | -0.49 | 0.38 | 0.76 | 0.80 | 2.48 | 9073 | 1144 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8SoY | 40671 | 2024-03-14 | 2023-04-30 | 2.85 | 2.95 | 2.81 | 3.0 | 0.005 | 0.73 | 0.0 | 0.05 | 12.14 | 0.01 | 2.374 | 1.86 | 0.00 | 2.3 | 97.7 | 0.0 | -0.69 | 0.70 | 0.82 | 2.95 | 3.0 | 0.003 | 0.58 | 0.0 | 0.05 | 15.39 | 0.01 | 2.306 | 3.36 | 3.20 | 2.5 | 97.5 | 0.0 | -0.06 | 0.27 | 0.70 | 0.83 | 1.63 | 10074 | 1422 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Yi0 | 33845 | 2024-03-16 | 2022-07-14 | 3.2 | 3.31 | 3.15 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.67 | 0.00 | 2.105 | 8.46 | 0.93 | 5.7 | 94.3 | 0.0 | -0.27 | 0.62 | 0.62 | 1.43 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 17.42 | 0.00 | 2.110 | 9.85 | 2.39 | 5.4 | 94.6 | 0.0 | 0.81 | 2.09 | 0.68 | 0.75 | 1.64 | 13430 | 1638 | 9 | 0 | 7 | 0 | 0 | logfile |
✔ | 8D2V | 27151 | 2024-03-11 | 2022-05-30 | 4.1 | 4.15 | 3.87 | 4.1 | 0.010 | 1.14 | 0.0 | 0.05 | 28.59 | 0.01 | 2.262 | 6.24 | 0.75 | 6.2 | 93.8 | 0.0 | -1.27 | 0.63 | 0.75 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 12.25 | 0.00 | 2.197 | 9.18 | 0.19 | 5.3 | 94.7 | 0.0 | 0.09 | 0.64 | 0.69 | 0.77 | — | 6388 | 864 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 8JiS | 36326 | 2024-03-14 | 2023-05-27 | 2.46 | 3.46 | 2.49 | 3.2 | 0.009 | 1.20 | 0.0 | 0.08 | 19.44 | 0.01 | 2.266 | 8.79 | 14.75 | 6.9 | 92.2 | 0.9 | -1.22 | 0.66 | 0.77 | 2.14 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 17.06 | 0.00 | 2.190 | 8.85 | 4.47 | 5.0 | 94.9 | 0.1 | 1.01 | 0.57 | 0.66 | 0.78 | 2.16 | 9158 | 1174 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Gi2 | 40060 | 2024-03-18 | 2023-03-13 | 3.0 | 3.25 | 3.18 | 3.3 | 0.008 | 0.98 | 0.0 | 0.05 | 11.48 | 0.00 | 1.504 | 31.63 | 3.45 | 13.0 | 86.3 | 0.7 | -3.41 | 0.55 | 0.82 | 2.11 | 3.2 | 0.004 | 0.82 | 0.0 | 0.05 | 15.98 | 0.00 | 2.151 | 11.63 | 5.34 | 9.1 | 90.9 | 0.0 | -1.40 | 1.24 | 0.57 | 0.86 | 2.84 | 20820 | 2940 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GUQ | 34276 | 2024-03-11 | 2022-09-13 | 3.08 | 3.53 | 3.14 | 3.5 | 0.010 | 1.01 | 0.0 | 0.06 | 14.89 | 0.01 | 2.240 | 4.99 | 0.32 | 5.6 | 94.4 | 0.0 | -5.16 | 0.64 | 0.77 | 3.19 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 15.99 | 0.00 | 2.079 | 9.46 | 2.96 | 4.1 | 95.9 | 0.0 | -0.99 | 1.46 | 0.63 | 0.79 | 2.39 | 8789 | 1135 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7YiY | 33866 | 2024-03-14 | 2022-07-18 | 2.7 | 2.84 | 2.66 | 2.8 | 0.008 | 1.00 | 0.0 | 0.06 | 16.20 | 0.01 | 2.205 | 6.16 | 4.77 | 5.2 | 94.2 | 0.6 | -1.48 | 0.71 | 0.87 | 3.70 | 2.8 | 0.003 | 0.61 | 0.0 | 0.05 | 16.67 | 0.01 | 2.221 | 3.13 | 2.03 | 4.0 | 96.0 | 0.0 | 0.69 | 1.58 | 0.71 | 0.88 | 2.95 | 9257 | 1164 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 8HK3 | 34843 | 2024-03-11 | 2022-11-24 | 3.2 | 2.28 | 3.11 | 2.1 | 0.002 | 0.42 | 0.0 | 0.04 | 6.31 | 0.00 | 2.069 | 3.40 | 0.11 | 0.9 | 99.1 | 0.0 | -1.02 | 0.74 | 0.73 | 3.34 | 2.1 | 0.003 | 0.57 | 0.0 | 0.04 | 13.55 | 0.00 | 2.146 | 6.74 | 2.45 | 3.0 | 97.0 | 0.0 | 0.97 | 1.21 | 0.77 | 0.79 | 3.00 | 8746 | 1135 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H9L | 34572 | 2024-03-19 | 2022-10-25 | 2.61 | 2.91 | 2.74 | 2.9 | 0.011 | 0.87 | 0.0 | 0.05 | 14.63 | 0.01 | 1.782 | 7.41 | 0.00 | 3.5 | 96.5 | 0.0 | -2.29 | 0.75 | 0.89 | 4.47 | 2.9 | 0.005 | 0.60 | 0.0 | 0.05 | 16.37 | 0.00 | 1.927 | 6.88 | 1.61 | 2.4 | 97.6 | 0.0 | 0.81 | 0.83 | 0.70 | 0.90 | 3.99 | 23963 | 3128 | 14 | 0 | 10 | 0 | 0 | logfile |
✔ | 8EVB | 28625 | 2024-03-16 | 2022-10-20 | 3.6 | 3.96 | 3.73 | 4.0 | 0.014 | 1.29 | 0.0 | 0.11 | 15.30 | 0.01 | 2.116 | 9.79 | 0.63 | 4.5 | 95.5 | 0.0 | -5.11 | 0.66 | 0.80 | 1.95 | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 15.83 | 0.00 | 2.191 | 11.30 | 2.66 | 3.8 | 96.2 | 0.0 | 0.57 | 0.99 | 0.66 | 0.80 | 1.38 | 14456 | 1751 | 8 | 0 | 7 | 0 | 0 | logfile |
✔ | 7YC8 | 33736 | 2024-03-11 | 2022-07-01 | 4.14 | 7.25 | 4.31 | 4.1 | 0.002 | 0.51 | 0.0 | 0.02 | 25.12 | 0.00 | 2.079 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.96 | 0.87 | — | 4.1 | 0.006 | 0.81 | 0.0 | 0.04 | 27.57 | 0.01 | 1.977 | 68.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.24 | 0.97 | 0.89 | — | 8335 | 0 | 1 | 388 | 1 | 0 | 0 | logfile |
✔ | 8SP8 | 40676 | 2024-03-24 | 2023-05-02 | 2.79 | 3.19 | 3.00 | 3.2 | 0.014 | 1.17 | 0.0 | 0.06 | 16.36 | 0.01 | 2.073 | 2.78 | 0.00 | 8.2 | 91.8 | 0.0 | -4.84 | 0.53 | 0.77 | 4.48 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.06 | 0.00 | 2.142 | 13.17 | 1.79 | 7.2 | 92.8 | 0.0 | 0.25 | 1.39 | 0.51 | 0.80 | 3.50 | 40942 | 2448 | 8 | 0 | 50 | 0 | 19860 | logfile |
✔ | 8ACT | 15353 | 2024-03-17 | 2022-07-06 | 3.6 | 4.18 | 3.75 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.83 | 0.00 | 1.812 | 16.02 | 0.00 | 2.9 | 97.1 | 0.0 | 0.58 | 0.83 | 0.70 | 0.76 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 16.64 | 0.00 | 1.961 | 18.58 | 1.68 | 4.0 | 96.0 | 0.0 | 0.07 | 2.02 | 0.83 | 0.72 | 1.02 | 18843 | 2322 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 8WD8 | 37457 | 2024-03-16 | 2023-09-14 | 2.9 | 3.05 | 2.88 | 3.1 | 0.004 | 0.70 | 0.0 | 0.05 | 19.79 | 0.01 | 1.852 | 3.54 | 0.65 | 3.5 | 96.5 | 0.0 | -1.91 | 0.77 | 0.89 | 2.83 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 20.03 | 0.00 | 1.920 | 5.31 | 2.89 | 2.7 | 97.3 | 0.0 | 0.69 | 0.94 | 0.70 | 0.89 | 3.33 | 13667 | 1500 | 9 | 64 | 7 | 0 | 0 | logfile |
✔ | 8SEU | 40429 | 2024-03-18 | 2023-04-10 | 3.0 | 3.25 | 3.00 | 3.2 | 0.005 | 0.72 | 8.0 | 0.05 | 12.63 | 0.00 | 1.873 | 7.45 | 1.96 | 2.3 | 97.4 | 0.3 | 1.51 | 0.59 | 0.85 | 2.48 | 3.2 | 0.002 | 0.51 | 0.0 | 0.04 | 15.50 | 0.00 | 2.223 | 6.02 | 2.23 | 1.7 | 98.2 | 0.2 | 2.92 | 1.40 | 0.57 | 0.85 | 2.21 | 20576 | 2512 | 8 | 0 | 4 | 0 | 0 | logfile |