The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UZQ | 26916 | 2023-11-17 | 2022-05-09 | 2.17 | 2.05 | 2.16 | 2.1 | 0.006 | 0.92 | 0.0 | 0.05 | 16.21 | 0.01 | 2.215 | 4.59 | 2.27 | 1.8 | 98.0 | 0.2 | 2.16 | 0.68 | 0.87 | 5.59 | 2.1 | 0.004 | 0.62 | 0.0 | 0.04 | 16.14 | 0.00 | 2.133 | 5.32 | 1.89 | 2.0 | 97.9 | 0.1 | 1.79 | 0.24 | 0.69 | 0.88 | 5.85 | 20617 | 1315 | 10 | 0 | 4 | 235 | 10214 | logfile |
✔ | 6KQK | 0753 | 2023-11-15 | 2019-08-18 | 2.17 | 3.14 | — | 2.8 | 0.018 | 1.17 | 12.0 | 0.06 | 14.73 | 0.00 | 1.876 | 11.30 | 0.00 | 7.4 | 92.6 | 0.0 | -4.38 | 0.82 | 0.84 | 4.45 | 2.8 | 0.003 | 0.73 | 2.0 | 0.12 | 15.49 | 0.00 | 1.782 | 9.69 | 0.69 | 4.1 | 95.9 | 0.0 | 0.23 | 0.79 | 0.82 | 0.86 | 4.20 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7MXY | 24076 | 2023-11-18 | 2021-05-19 | 2.18 | 2.49 | — | 2.5 | 0.006 | 0.66 | 0.0 | 0.04 | 18.00 | 0.00 | 2.195 | 11.50 | 3.20 | 3.3 | 96.7 | 0.0 | 1.25 | 0.50 | 0.66 | 2.36 | 2.4 | 0.008 | 0.70 | 0.0 | 0.04 | 18.27 | 0.00 | 1.942 | 15.77 | 5.36 | 4.4 | 95.6 | 0.0 | 0.16 | 1.13 | 0.53 | 0.70 | 2.51 | 22265 | 1406 | 12 | 0 | 5 | 2 | 11129 | logfile |
✔ | 7UTD | 26767 | 2023-11-13 | 2022-04-26 | 2.19 | 3.00 | 2.25 | 2.5 | 0.060 | 2.36 | 28.0 | 1.00 | 15.03 | 0.02 | 1.964 | 8.43 | 1.36 | 2.2 | 97.7 | 0.1 | -0.03 | 0.71 | 0.61 | 3.58 | 2.6 | 0.005 | 1.93 | 0.0 | 0.08 | 15.64 | 0.00 | 1.523 | 16.31 | 1.27 | 2.9 | 97.1 | 0.0 | 0.37 | 1.33 | 0.88 | 0.85 | 3.78 | 54200 | 6908 | 36 | 0 | 64 | 0 | 0 | logfile |
✔ | 8DBG | 27283 | 2023-11-16 | 2022-06-14 | 2.2 | 2.20 | 2.25 | 2.2 | 0.007 | 0.69 | 0.0 | 0.05 | 15.18 | 0.00 | 1.958 | 4.92 | 1.97 | 3.4 | 96.6 | 0.0 | 0.54 | 0.71 | 0.86 | 6.29 | 2.2 | 0.002 | 0.48 | 0.0 | 0.05 | 16.08 | 0.00 | 1.996 | 5.40 | 2.23 | 3.3 | 96.7 | 0.0 | 1.17 | 0.31 | 0.74 | 0.90 | 5.48 | 14442 | 1854 | 18 | 0 | 30 | 12 | 0 | logfile |
✔ | 7DRT | 30827 | 2023-11-14 | 2020-12-29 | 2.2 | 2.32 | — | 2.3 | 0.011 | 1.32 | 9.0 | 0.09 | 13.11 | 0.01 | 2.064 | 5.88 | 2.38 | 5.4 | 94.1 | 0.5 | -0.76 | 0.39 | 0.58 | 3.02 | 2.3 | 0.003 | 0.69 | 0.0 | 0.04 | 17.21 | 0.01 | 2.239 | 10.06 | 5.03 | 6.4 | 93.5 | 0.1 | -0.37 | 1.11 | 0.64 | 0.77 | 2.79 | 6849 | 830 | 7 | 0 | 7 | 10 | 0 | logfile |
✔ | 6DRV | 8908 | 2023-11-21 | 2018-06-13 | 2.2 | 2.30 | 2.26 | 2.3 | 0.017 | 1.44 | 0.0 | 0.08 | 12.56 | 0.02 | 2.116 | 3.99 | 0.23 | 6.8 | 91.1 | 2.1 | -1.87 | 0.59 | 0.79 | 5.89 | 2.3 | 0.004 | 0.73 | 0.0 | 0.05 | 16.34 | 0.00 | 2.161 | 6.53 | 1.28 | 2.7 | 97.2 | 0.0 | 0.28 | 1.48 | 0.74 | 0.89 | 5.92 | 32888 | 4096 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XTG | 33448 | 2023-11-16 | 2022-05-17 | 2.2 | 2.41 | 2.26 | 2.5 | 0.004 | 0.76 | 0.0 | 0.04 | 18.28 | 0.01 | 2.094 | 13.57 | 2.55 | 4.4 | 95.4 | 0.1 | -0.48 | 0.60 | 0.72 | 1.71 | 2.4 | 0.003 | 0.63 | 0.0 | 0.04 | 17.43 | 0.00 | 2.254 | 8.13 | 2.36 | 3.5 | 96.3 | 0.1 | 2.06 | 2.09 | 0.67 | 0.89 | 2.88 | 15435 | 2034 | 15 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DBF | 27282 | 2023-11-20 | 2022-06-14 | 2.2 | 2.32 | 2.21 | 2.3 | 0.014 | 0.99 | 0.0 | 0.05 | 17.66 | 0.05 | 1.866 | 9.33 | 3.08 | 4.1 | 95.9 | 0.0 | 0.97 | 0.74 | 0.87 | 5.47 | 2.3 | 0.003 | 1.61 | 0.0 | 0.05 | 17.73 | 0.00 | 1.853 | 5.92 | 1.93 | 2.2 | 97.8 | 0.0 | 0.39 | 1.14 | 0.75 | 0.89 | 5.72 | 29964 | 3792 | 36 | 0 | 60 | 84 | 0 | logfile |
✔ | 8G3K | 29700 | 2023-11-13 | 2023-02-08 | 2.2 | 2.34 | 2.21 | 2.3 | 0.002 | 0.36 | 0.0 | 0.03 | 9.98 | 0.00 | 2.348 | 3.50 | 0.00 | 0.7 | 99.3 | 0.0 | 5.07 | 0.46 | 0.82 | 4.79 | 2.3 | 0.002 | 0.47 | 0.0 | 0.03 | 17.12 | 0.00 | 2.333 | 3.72 | 0.41 | 0.7 | 99.3 | 0.0 | 4.78 | 1.17 | 0.47 | 0.83 | 4.98 | 2244 | 285 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BKB | 16095 | 2023-11-21 | 2022-11-08 | 2.2 | 1.97 | 2.09 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.225 | 1.59 | 1.40 | 1.4 | 98.6 | 0.0 | 4.82 | 0.71 | 0.86 | 6.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35139 | 4128 | 54 | 0 | 6 | 1317 | 0 | logfile |
✔ | 8F2A | 28810 | 2023-11-15 | 2022-11-07 | 2.2 | 2.40 | 2.32 | 2.5 | 0.011 | 0.60 | 0.0 | 0.05 | 13.84 | 0.00 | 2.188 | 4.68 | 0.76 | 1.7 | 98.3 | 0.0 | -2.70 | 0.65 | 0.84 | 4.09 | 2.5 | 0.002 | 0.55 | 0.0 | 0.04 | 16.16 | 0.00 | 2.197 | 6.71 | 1.80 | 1.4 | 98.6 | 0.0 | 0.79 | 0.52 | 0.64 | 0.83 | 3.71 | 10044 | 1276 | 9 | 0 | 5 | 0 | 0 | logfile |
✔ | 6WZ5 | 21970 | 2023-11-15 | 2020-05-13 | 2.2 | 2.36 | — | 2.2 | 0.008 | 0.69 | 0.0 | 0.04 | 28.82 | 0.00 | 2.253 | 4.68 | 0.93 | 2.2 | 97.8 | 0.0 | 0.00 | 0.75 | 0.71 | 2.93 | 2.2 | 0.004 | 0.59 | 0.0 | 0.03 | 29.22 | 0.00 | 2.154 | 6.07 | 0.93 | 1.7 | 98.3 | 0.0 | 2.78 | 0.90 | 0.86 | 0.89 | 3.76 | 12443 | 774 | 10 | 306 | 0 | 0 | 0 | logfile |
✔ | 8GHD | 40041 | 2023-11-21 | 2023-03-09 | 2.2 | 2.57 | — | 2.5 | 0.007 | 1.07 | 0.0 | 0.05 | 14.42 | 0.01 | 2.189 | 4.90 | 0.00 | 2.1 | 97.9 | 0.0 | 0.43 | 0.78 | 0.90 | 5.27 | 2.4 | 0.005 | 0.58 | 0.0 | 0.04 | 16.60 | 0.01 | 2.192 | 9.26 | 1.02 | 2.2 | 97.8 | 0.0 | 1.38 | 0.97 | 0.77 | 0.91 | 5.18 | 32220 | 3972 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 8oQ7 | 17107 | 2023-11-16 | 2023-04-11 | 2.2 | 2.13 | 2.08 | 2.2 | 0.009 | 0.90 | 0.0 | 0.09 | 11.00 | 0.01 | 2.290 | 1.40 | 0.33 | 1.5 | 98.5 | 0.0 | 2.27 | 0.73 | 0.85 | 5.65 | 2.1 | 0.004 | 0.66 | 0.0 | 0.04 | 14.48 | 0.00 | 2.108 | 1.61 | 1.33 | 2.1 | 97.9 | 0.0 | 2.06 | 1.02 | 0.73 | 0.86 | 5.76 | 14702 | 1680 | 15 | 0 | 57 | 505 | 0 | logfile |
✘ | 7W9K | 32368 | 2023-11-16 | 2021-12-09 | 2.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14933 | 1705 | 9 | 0 | 43 | 9 | 0 | logfile |
✔ | 8GVK | 32099 | 2023-11-13 | 2022-09-15 | 2.2 | 2.06 | 2.20 | 2.2 | 0.006 | 1.29 | 0.0 | 0.06 | 15.35 | 0.00 | 2.057 | 5.53 | 4.07 | 3.4 | 94.0 | 2.6 | -1.54 | 0.65 | 0.80 | 5.76 | 2.1 | 0.003 | 0.77 | 0.0 | 0.04 | 15.42 | 0.00 | 2.211 | 9.90 | 2.62 | 4.3 | 94.9 | 0.9 | -0.94 | 0.88 | 0.74 | 0.85 | 6.36 | 3567 | 476 | 8 | 0 | 0 | 19 | 0 | logfile |
✔ | 7P6B | 13224 | 2023-11-13 | 2021-07-15 | 2.2 | 1.98 | 2.14 | 2.1 | 0.004 | 0.75 | 0.0 | 0.09 | 13.80 | 0.01 | 2.246 | 4.21 | 0.00 | 3.8 | 96.2 | 0.0 | -2.60 | 0.48 | 0.85 | 6.24 | 2.0 | 0.005 | 0.67 | 0.0 | 0.05 | 17.01 | 0.00 | 2.132 | 7.10 | 0.43 | 4.7 | 95.3 | 0.0 | -2.28 | 2.23 | 0.49 | 0.88 | 6.77 | 4060 | 540 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZP8 | 14850 | 2023-11-20 | 2022-04-26 | 2.2 | 3.37 | 2.30 | 2.5 | 0.008 | 1.05 | 2.0 | 0.11 | 19.16 | 0.00 | 1.813 | 5.05 | 1.68 | 4.7 | 95.1 | 0.2 | -0.45 | 0.78 | 0.87 | 4.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 90951 | 3145 | 32 | 3095 | 0 | 0 | 0 | logfile |
✘ | 8G3V | 29710 | 2023-11-17 | 2023-02-08 | 2.2 | 2.84 | 2.21 | 2.7 | 0.014 | 1.61 | 4.0 | 0.09 | 13.68 | 0.01 | 2.257 | 0.54 | 0.00 | 3.9 | 95.8 | 0.3 | -0.74 | 0.83 | 0.93 | 6.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20045 | 2500 | 28 | 0 | 61 | 0 | 0 | logfile |