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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LN6 | 0925 | 2024-03-11 | 2019-12-28 | 2.9 | 3.03 | 2.87 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 12.49 | 0.00 | 2.035 | 6.53 | 0.00 | 2.0 | 98.0 | 0.0 | -3.94 | 0.65 | 0.82 | 3.55 | 3.0 | 0.005 | 0.61 | 0.0 | 0.05 | 15.84 | 0.00 | 2.025 | 6.66 | 1.97 | 2.5 | 97.5 | 0.0 | 0.12 | 1.32 | 0.66 | 0.84 | 3.35 | 7836 | 1010 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6NRV | 0497 | 2024-03-16 | 2019-01-24 | 4.0 | 4.07 | — | 3.9 | 0.007 | 0.96 | 0.0 | 0.05 | 8.19 | 0.00 | 1.971 | 5.74 | 0.00 | 11.1 | 88.9 | 0.0 | -4.59 | 0.77 | 0.78 | — | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 13.36 | 0.00 | 2.183 | 16.86 | 3.02 | 9.2 | 90.8 | 0.0 | -1.57 | 1.50 | 0.78 | 0.81 | — | 13637 | 1898 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCG | 12265 | 2024-03-15 | 2021-01-28 | 3.43 | 3.45 | 3.16 | 3.6 | 0.012 | 2.20 | 0.0 | 0.08 | 10.99 | 0.01 | 2.685 | 0.58 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 0.58 | 0.69 | 3.64 | 3.5 | 0.002 | 0.61 | 0.0 | 0.05 | 13.61 | 0.00 | 2.003 | 7.20 | 3.29 | 7.5 | 92.5 | 0.0 | -2.07 | 1.41 | 0.61 | 0.73 | 3.22 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 5o3L | 3741 | 2024-03-15 | 2017-05-24 | 3.4 | 3.71 | 3.34 | 3.7 | 0.012 | 1.03 | 0.0 | 0.06 | 8.97 | 0.01 | 2.111 | 9.60 | 0.00 | 22.4 | 77.6 | 0.0 | -6.67 | 0.60 | 0.69 | 2.44 | 3.6 | 0.003 | 0.75 | 0.0 | 0.05 | 15.36 | 0.01 | 1.918 | 13.91 | 4.69 | 12.5 | 87.5 | 0.0 | -5.16 | 2.67 | 0.57 | 0.75 | 2.40 | 11360 | 730 | 10 | 0 | 0 | 0 | 5790 | logfile |
✔ | 7TT5 | 26111 | 2024-03-16 | 2022-01-31 | 4.3 | 4.48 | — | 4.4 | 0.004 | 0.69 | 0.0 | 0.04 | 10.02 | 0.01 | 2.033 | 4.14 | 0.00 | 0.9 | 99.1 | 0.0 | 1.26 | 0.65 | 0.70 | — | 4.3 | 0.003 | 0.54 | 0.0 | 0.04 | 12.07 | 0.00 | 1.888 | 7.23 | 0.00 | 2.5 | 97.5 | 0.0 | 0.64 | 1.18 | 0.68 | 0.77 | — | 14255 | 928 | 5 | 0 | 0 | 0 | 6938 | logfile |
✔ | 6KLD | 0707 | 2024-03-15 | 2019-07-30 | 3.58 | 3.66 | — | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 14.00 | 0.00 | 2.199 | 8.12 | 0.00 | 9.2 | 90.7 | 0.1 | -0.76 | 0.74 | 0.82 | 2.05 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 16.02 | 0.00 | 2.136 | 8.79 | 2.76 | 8.8 | 91.1 | 0.1 | -0.07 | 0.40 | 0.72 | 0.81 | 1.58 | 12794 | 1617 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7NCi | 12267 | 2024-03-15 | 2021-01-28 | 3.55 | 3.67 | 3.44 | 4.0 | 0.012 | 1.57 | 2.0 | 0.10 | 15.57 | 0.01 | 2.481 | 0.35 | 0.00 | 8.9 | 91.1 | 0.0 | -3.74 | 0.68 | 0.59 | 1.81 | 3.8 | 0.004 | 0.63 | 2.0 | 0.05 | 15.17 | 0.00 | 1.925 | 22.63 | 6.30 | 14.3 | 85.7 | 0.0 | -4.47 | 1.57 | 0.64 | 0.58 | 0.62 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 8ioS | 35622 | 2024-03-20 | 2023-03-13 | 2.5 | 3.18 | 2.60 | 3.1 | 0.003 | 0.54 | 0.0 | 0.05 | 12.91 | 0.00 | 2.195 | 4.04 | 0.00 | 2.9 | 97.1 | 0.0 | 0.45 | 0.83 | 0.87 | 3.69 | 3.0 | 0.005 | 0.62 | 0.0 | 0.05 | 13.80 | 0.00 | 2.117 | 4.71 | 0.72 | 4.8 | 95.2 | 0.0 | 0.25 | 0.26 | 0.81 | 0.86 | 3.97 | 25695 | 3189 | 15 | 0 | 54 | 0 | 0 | logfile |
✔ | 7PM3 | 13511 | 2024-03-14 | 2021-09-01 | 3.1 | 3.07 | 3.12 | 3.1 | 0.025 | 2.31 | 0.0 | 0.07 | 19.42 | 0.01 | 2.019 | 5.42 | 0.00 | 0.0 | 100.0 | 0.0 | -0.98 | 0.85 | 0.82 | 3.08 | 3.1 | 0.003 | 1.25 | 0.0 | 0.04 | 18.68 | 0.00 | 2.063 | 9.37 | 0.96 | 1.6 | 98.4 | 0.0 | 1.19 | 1.71 | 0.87 | 0.85 | 2.45 | 8940 | 1113 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7TT6 | 26112 | 2024-03-16 | 2022-01-31 | 4.3 | 4.50 | — | 4.4 | 0.005 | 0.91 | 0.0 | 0.05 | 10.73 | 0.01 | 2.190 | 3.14 | 0.00 | 1.4 | 98.6 | 0.0 | 0.38 | 0.64 | 0.69 | — | 4.4 | 0.005 | 0.65 | 0.0 | 0.04 | 12.11 | 0.01 | 1.869 | 10.83 | 0.00 | 4.0 | 96.0 | 0.0 | -0.43 | 1.17 | 0.66 | 0.75 | — | 14047 | 915 | 5 | 0 | 0 | 0 | 6839 | logfile |
✔ | 7PM2 | 13510 | 2024-03-15 | 2021-09-01 | 3.6 | 3.83 | 3.61 | 3.6 | 0.014 | 1.42 | 0.0 | 0.06 | 16.76 | 0.01 | 2.085 | 4.75 | 0.00 | 0.2 | 99.8 | 0.0 | -1.45 | 0.89 | 0.84 | 2.55 | 3.6 | 0.003 | 0.86 | 0.0 | 0.04 | 17.13 | 0.00 | 1.984 | 8.02 | 1.29 | 1.7 | 98.3 | 0.0 | 1.58 | 1.72 | 0.89 | 0.85 | 2.25 | 10156 | 1259 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LN8 | 0927 | 2024-03-11 | 2019-12-28 | 3.1 | 3.26 | 3.33 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 12.81 | 0.00 | 2.051 | 6.74 | 0.00 | 3.0 | 97.0 | 0.0 | -2.71 | 0.70 | 0.80 | 2.37 | 3.3 | 0.002 | 0.50 | 0.0 | 0.04 | 15.20 | 0.00 | 1.385 | 8.28 | 2.58 | 2.5 | 97.5 | 0.0 | 0.26 | 0.44 | 0.69 | 0.82 | 1.79 | 7739 | 1003 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7YL3 | 33902 | 2024-03-10 | 2022-07-25 | 3.2 | 3.58 | 3.19 | 3.5 | 0.011 | 2.22 | 0.0 | 0.06 | 12.08 | 0.00 | 1.654 | 22.50 | 0.00 | 3.3 | 96.7 | 0.0 | -4.03 | 0.45 | 0.76 | 4.44 | 3.5 | 0.005 | 0.74 | 0.0 | 0.04 | 13.39 | 0.00 | 2.147 | 7.43 | 4.32 | 7.8 | 92.2 | 0.0 | -4.81 | 1.29 | 0.42 | 0.76 | 5.06 | 2958 | 396 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M0S | 30035 | 2024-03-24 | 2020-02-22 | 3.6 | 3.77 | — | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 8.18 | 0.00 | 2.205 | 1.30 | 0.00 | 1.9 | 98.1 | 0.0 | -4.94 | 0.71 | 0.74 | 1.42 | 3.7 | 0.002 | 0.57 | 0.0 | 0.04 | 14.44 | 0.00 | 2.071 | 4.93 | 1.16 | 2.2 | 97.8 | 0.0 | -0.16 | 1.31 | 0.76 | 0.81 | 1.53 | 44660 | 2909 | 15 | 0 | 0 | 0 | 22618 | logfile |
✘ | 8JPo | 36485 | 2024-03-15 | 2023-06-12 | 3.4 | 3.43 | 3.16 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.94 | 0.00 | 2.267 | 6.38 | 0.00 | 2.8 | 97.2 | 0.0 | 0.44 | 0.75 | 0.90 | 3.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11476 | 1466 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 8iKL | 35516 | 2024-03-11 | 2023-02-28 | 2.33 | 2.00 | 2.35 | 1.7 | 0.004 | 0.53 | 0.0 | 0.04 | 12.54 | 0.00 | 2.191 | 5.04 | 0.00 | 1.6 | 98.4 | 0.0 | 1.25 | 0.81 | 0.80 | 4.16 | 1.7 | 0.003 | 0.51 | 0.0 | 0.04 | 15.06 | 0.00 | 2.150 | 7.27 | 1.19 | 2.7 | 97.3 | 0.0 | 1.79 | 0.33 | 0.83 | 0.83 | 3.49 | 6942 | 875 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6G1X | 4341 | 2024-03-14 | 2018-03-22 | 3.93 | 4.03 | 3.76 | 4.0 | 0.012 | 0.99 | 0.0 | 0.05 | 13.24 | 0.01 | 2.008 | 12.96 | 0.00 | 12.7 | 87.3 | 0.0 | -3.99 | 0.59 | 0.75 | 2.07 | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 16.62 | 0.00 | 1.953 | 26.71 | 1.75 | 9.9 | 90.1 | 0.0 | -0.34 | 1.52 | 0.59 | 0.77 | 2.35 | 9989 | 648 | 4 | 30 | 1 | 0 | 4182 | logfile |
✔ | 6DJP | 7939 | 2024-03-11 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 11.31 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.19 | 0.0 | 0.05 | 10.55 | 0.01 | 2.168 | 17.65 | 0.00 | 23.0 | 76.9 | 0.1 | -4.03 | 1.19 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 6XL0 | 22231 | 2024-03-23 | 2020-06-27 | 3.4 | 3.44 | 3.37 | 3.5 | 0.008 | 0.81 | 0.0 | 0.05 | 12.66 | 0.00 | 2.137 | 9.20 | 0.00 | 3.0 | 97.0 | 0.0 | 0.73 | 0.50 | 0.80 | 1.02 | 3.4 | 0.003 | 0.55 | 0.0 | 0.03 | 15.89 | 0.00 | 2.100 | 7.25 | 2.57 | 2.6 | 97.4 | 0.0 | 3.37 | 1.15 | 0.51 | 0.83 | 1.17 | 38820 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A7o | 15222 | 2024-03-10 | 2022-06-21 | 3.0 | 3.15 | 2.97 | 3.0 | 0.002 | 0.55 | 0.0 | 0.04 | 11.28 | 0.00 | 2.418 | 6.71 | 0.00 | 2.9 | 97.1 | 0.0 | -3.59 | 0.50 | 0.88 | 5.55 | 2.9 | 0.004 | 0.63 | 0.0 | 0.05 | 14.39 | 0.00 | 2.256 | 5.54 | 1.81 | 7.9 | 92.1 | 0.0 | -3.58 | 1.40 | 0.49 | 0.91 | 5.45 | 4362 | 528 | 6 | 0 | 0 | 0 | 0 | logfile |