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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8AD1 | 15357 | 2024-03-20 | 2022-07-07 | 4.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28169 | 3403 | 9 | 71 | 3 | 0 | 0 | logfile |
✔ | 5o31 | 3731 | 2024-03-26 | 2017-05-23 | 4.13 | 4.19 | — | 4.1 | 0.008 | 1.37 | 11.0 | 1.11 | 14.05 | 0.01 | 2.512 | 2.82 | 2.22 | 9.3 | 88.3 | 2.4 | -4.78 | 0.70 | 0.73 | — | 4.1 | 0.009 | 1.82 | 0.0 | 0.33 | 12.95 | 0.00 | 2.063 | 13.64 | 0.00 | 9.4 | 90.2 | 0.4 | -1.57 | 2.17 | 0.70 | 0.76 | — | 52703 | 7006 | 52 | 0 | 816 | 0 | 0 | logfile |
✔ | 7MHZ | 23837 | 2024-03-10 | 2021-04-16 | 3.2 | 3.82 | — | 3.7 | 0.005 | 0.77 | 0.0 | 1.63 | 49.49 | 0.00 | 2.210 | 7.55 | 0.00 | 3.4 | 96.6 | 0.0 | 1.45 | 0.61 | 0.79 | 2.94 | 3.7 | 0.002 | 2.50 | 0.0 | 0.25 | 33.72 | 0.00 | 2.166 | 6.11 | 1.56 | 2.7 | 97.3 | 0.0 | 1.84 | 0.35 | 0.60 | 0.79 | 2.65 | 6189 | 723 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7SL7 | 25193 | 2024-03-17 | 2021-10-22 | 3.1 | 3.35 | — | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 13.08 | 0.00 | 2.149 | 8.91 | 0.24 | 5.5 | 94.2 | 0.3 | -0.86 | 0.77 | 0.82 | 3.06 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.10 | 0.00 | 2.192 | 10.46 | 1.56 | 6.1 | 93.9 | 0.0 | -0.80 | 0.97 | 0.77 | 0.85 | 2.84 | 14732 | 1826 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7A23 | 11614 | 2024-03-11 | 2020-08-15 | 3.7 | 3.80 | — | 3.8 | 0.008 | 1.04 | 26.0 | 0.99 | 15.86 | 0.01 | 1.596 | 24.43 | 1.07 | 10.5 | 89.3 | 0.2 | -4.07 | 0.65 | 0.71 | 1.33 | 3.7 | 0.008 | 1.67 | 0.0 | 0.30 | 17.41 | 0.01 | 2.071 | 24.33 | 4.30 | 8.6 | 91.4 | 0.0 | -1.55 | 1.47 | 0.67 | 0.76 | 1.17 | 57959 | 7354 | 57 | 0 | 20 | 0 | 0 | logfile |
✔ | 7T11 | 25587 | 2024-03-11 | 2021-11-30 | 2.7 | 2.94 | — | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 10.83 | 0.00 | 2.107 | 3.46 | 0.27 | 2.4 | 97.6 | 0.0 | 0.96 | 0.60 | 0.74 | 3.90 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 13.40 | 0.00 | 2.239 | 3.20 | 1.47 | 2.4 | 97.6 | 0.0 | 1.41 | 0.39 | 0.62 | 0.79 | 3.19 | 8151 | 1132 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7QPD | 14119 | 2024-03-15 | 2022-01-03 | 3.73 | 3.98 | — | 3.9 | 0.005 | 0.81 | 0.0 | 0.05 | 12.54 | 0.00 | 2.225 | 9.51 | 0.09 | 4.9 | 95.0 | 0.1 | -1.20 | 0.80 | 0.76 | 2.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11521 | 1544 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 7WSC | 32753 | 2024-03-10 | 2022-01-28 | 3.78 | 4.01 | — | 4.0 | 0.013 | 1.67 | 5.0 | 0.10 | 15.34 | 0.01 | 1.600 | 41.09 | 4.99 | 14.7 | 81.6 | 3.6 | -4.09 | 0.65 | 0.78 | 2.33 | 4.0 | 0.005 | 0.85 | 0.0 | 0.05 | 16.53 | 0.01 | 2.143 | 21.38 | 6.65 | 12.8 | 86.7 | 0.5 | -2.74 | 1.23 | 0.64 | 0.78 | 1.89 | 3369 | 422 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E26 | 30952 | 2024-03-15 | 2021-02-04 | 2.29 | 2.97 | — | 2.9 | 0.009 | 0.93 | 0.0 | 0.06 | 14.05 | 0.01 | 2.312 | 2.69 | 1.19 | 1.5 | 98.5 | 0.0 | -2.93 | 0.73 | 0.88 | 5.43 | 2.9 | 0.003 | 0.53 | 0.0 | 0.04 | 15.90 | 0.00 | 2.195 | 4.24 | 2.12 | 1.7 | 98.3 | 0.0 | 1.50 | 0.31 | 0.56 | 0.82 | 5.04 | 11360 | 1435 | 10 | 0 | 0 | 80 | 0 | logfile |
✔ | 7WA1 | 32379 | 2024-03-11 | 2021-12-11 | 2.9 | 3.13 | — | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 11.30 | 0.01 | 2.103 | 2.47 | 1.59 | 2.8 | 97.2 | 0.0 | -3.55 | 0.68 | 0.82 | 3.80 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.13 | 0.00 | 2.150 | 6.45 | 1.88 | 2.7 | 97.3 | 0.0 | 0.56 | 1.45 | 0.66 | 0.83 | 3.67 | 6440 | 790 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WRY | 32737 | 2024-03-10 | 2022-01-27 | 3.28 | 3.44 | — | 3.4 | 0.006 | 0.91 | 0.0 | 0.06 | 16.47 | 0.01 | 2.313 | 3.13 | 0.29 | 6.7 | 93.3 | 0.0 | -2.76 | 0.58 | 0.84 | 4.11 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 15.65 | 0.00 | 2.223 | 7.50 | 3.16 | 5.4 | 94.6 | 0.0 | -1.38 | 0.39 | 0.57 | 0.85 | 4.28 | 3267 | 413 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 6G5H | 4352 | 2024-03-16 | 2018-03-29 | 3.6 | 3.69 | — | 3.6 | 0.011 | 1.33 | 2.0 | 0.07 | 22.39 | 0.01 | 1.511 | 9.43 | 1.22 | 8.6 | 91.2 | 0.2 | -4.11 | 0.70 | 0.80 | 1.77 | 3.6 | 0.004 | 0.73 | 0.0 | 0.04 | 22.99 | 0.00 | 1.981 | 16.00 | 3.66 | 6.2 | 93.8 | 0.0 | -2.13 | 1.32 | 0.70 | 0.80 | 1.48 | 74342 | 4858 | 38 | 1665 | 3 | 0 | 0 | logfile |
✔ | 7VY3 | 32193 | 2024-03-17 | 2021-11-13 | 2.63 | 2.38 | — | 2.5 | 0.019 | 1.84 | 0.0 | 0.05 | 23.06 | 0.02 | 2.032 | 10.93 | 2.30 | 2.0 | 98.0 | 0.0 | 1.10 | 0.70 | 0.85 | 4.77 | 2.5 | 0.003 | 0.64 | 0.0 | 0.04 | 17.22 | 0.00 | 2.049 | 10.02 | 1.84 | 2.1 | 97.9 | 0.0 | 2.56 | 1.26 | 0.70 | 0.88 | 4.37 | 18831 | 1846 | 49 | 0 | 85 | 0 | 0 | logfile |
✘ | 6SL5 | 10236 | 2024-03-25 | 2019-08-18 | 2.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43789 | 3744 | 36 | 0 | 292 | 0 | 0 | logfile |
✔ | 6G5i | 4353 | 2024-03-17 | 2018-03-29 | 3.5 | 3.78 | — | 3.5 | 0.009 | 1.25 | 1.0 | 0.06 | 22.06 | 0.01 | 1.824 | 8.06 | 0.69 | 10.1 | 89.8 | 0.1 | -4.49 | 0.77 | 0.73 | 1.91 | 3.5 | 0.004 | 0.70 | 1.0 | 0.04 | 22.32 | 0.00 | 1.840 | 15.27 | 2.37 | 4.9 | 95.1 | 0.0 | -1.97 | 1.33 | 0.82 | 0.80 | 1.57 | 77185 | 5246 | 39 | 1657 | 3 | 0 | 0 | logfile |
✔ | 6WDN | 21642 | 2024-03-15 | 2020-04-01 | 3.2 | 4.00 | — | 3.8 | 0.005 | 0.74 | 2.0 | 0.05 | 15.07 | 0.01 | 2.166 | 14.85 | 0.52 | 7.1 | 92.9 | 0.0 | -5.36 | 0.74 | 0.82 | 1.98 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 17.03 | 0.00 | 2.071 | 11.40 | 2.60 | 5.0 | 95.0 | 0.0 | -0.82 | 0.62 | 0.74 | 0.82 | 1.93 | 12612 | 1540 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WEE | 32448 | 2024-03-10 | 2021-12-23 | 4.0 | 4.09 | — | 4.1 | 0.005 | 0.72 | 0.0 | 0.04 | 12.68 | 0.01 | 2.116 | 8.35 | 0.00 | 4.5 | 95.5 | 0.0 | -1.60 | 0.48 | 0.80 | — | 4.0 | 0.004 | 0.71 | 0.0 | 0.05 | 15.53 | 0.00 | 2.073 | 11.84 | 3.77 | 7.6 | 92.4 | 0.0 | -1.48 | 0.45 | 0.48 | 0.82 | — | 3350 | 429 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E9G | 31031 | 2024-03-18 | 2021-03-04 | 3.5 | 2.34 | — | 3.1 | 0.004 | 0.59 | 0.0 | 0.10 | 12.02 | 0.00 | 2.196 | 9.69 | 0.00 | 3.8 | 96.2 | 0.0 | -3.17 | 0.70 | 0.67 | 1.96 | 1.9 | 0.003 | 0.63 | 0.0 | 0.04 | 14.66 | 0.00 | 2.129 | 13.79 | 4.36 | 5.5 | 94.5 | 0.0 | -1.44 | 0.64 | 0.72 | 0.71 | 2.00 | 18816 | 2557 | 10 | 0 | 3 | 0 | 0 | logfile |
✔ | 5WQ8 | 6676 | 2024-03-11 | 2016-11-23 | 3.26 | 3.41 | — | 3.3 | 0.009 | 1.18 | 0.0 | 0.06 | 10.83 | 0.01 | 1.654 | 27.56 | 0.24 | 4.8 | 95.0 | 0.2 | -2.76 | 0.72 | 0.83 | 2.86 | 3.3 | 0.005 | 0.68 | 0.0 | 0.05 | 14.48 | 0.00 | 2.152 | 10.93 | 3.07 | 3.2 | 96.6 | 0.2 | -0.06 | 1.46 | 0.72 | 0.84 | 1.87 | 56460 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N4U | 24178 | 2024-03-16 | 2021-06-04 | 3.34 | 3.91 | — | 3.8 | 0.014 | 1.80 | 0.0 | 0.29 | 17.76 | 0.01 | 2.102 | 4.84 | 1.79 | 5.3 | 94.5 | 0.2 | -2.74 | 0.58 | 0.74 | 1.92 | 3.8 | 0.003 | 0.57 | 0.0 | 0.04 | 15.14 | 0.00 | 2.230 | 6.39 | 2.96 | 3.2 | 96.8 | 0.0 | 0.64 | 0.97 | 0.67 | 0.84 | 1.86 | 15396 | 1906 | 10 | 0 | 28 | 0 | 0 | logfile |