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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5G5L | 3439 | 2024-03-23 | 2016-05-26 | 4.8 | 5.08 | — | 4.8 | 0.010 | 1.38 | 14.0 | 0.09 | 16.60 | 0.01 | 0.675 | 31.05 | 7.76 | 6.0 | 92.2 | 1.8 | -2.38 | 0.81 | 0.71 | — | 4.8 | 0.004 | 0.74 | 0.0 | 0.04 | 13.39 | 0.00 | 2.050 | 18.55 | 0.00 | 4.1 | 95.9 | 0.1 | 0.41 | 3.23 | 0.86 | 0.83 | — | 37349 | 4686 | 20 | 0 | 7 | 0 | 0 | logfile |
✔ | 7PLA | 13486 | 2024-03-11 | 2021-08-30 | 3.04 | 4.14 | — | 3.1 | 0.008 | 1.08 | 0.0 | 0.09 | 26.24 | 0.00 | 2.216 | 9.66 | 0.26 | 3.3 | 96.7 | 0.0 | -0.03 | 0.74 | 0.61 | 1.97 | 3.1 | 0.007 | 0.73 | 0.0 | 0.04 | 24.69 | 0.00 | 2.139 | 19.26 | 2.33 | 4.4 | 95.6 | 0.0 | 0.16 | 0.87 | 0.84 | 0.81 | 1.68 | 8701 | 437 | 4 | 244 | 0 | 0 | 0 | logfile |
✔ | 6K3o | 9910 | 2024-03-21 | 2019-05-21 | 3.4 | 3.86 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 14.46 | 0.00 | 1.077 | 16.09 | 0.00 | 3.8 | 96.2 | 0.0 | -1.52 | 0.79 | 0.82 | 3.15 | 3.8 | 0.004 | 0.66 | 0.0 | 0.03 | 17.26 | 0.00 | 1.626 | 6.59 | 4.43 | 2.2 | 97.8 | 0.0 | 4.00 | 0.48 | 0.77 | 0.82 | 2.32 | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 6oCE | 20017 | 2024-03-15 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.71 | 0.0 | 0.04 | 12.27 | 0.01 | 2.249 | 11.38 | 0.00 | 12.6 | 87.4 | 0.0 | -2.49 | 1.76 | 0.46 | 0.62 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SJG | 10217 | 2024-03-19 | 2019-08-13 | 3.8 | 3.98 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.04 | 12.82 | 0.01 | 2.294 | 4.27 | 2.90 | 2.2 | 97.8 | 0.0 | -3.61 | 0.81 | 0.73 | 1.24 | 3.8 | 0.006 | 0.77 | 0.0 | 0.04 | 16.49 | 0.00 | 2.103 | 17.69 | 2.94 | 4.4 | 95.6 | 0.0 | -0.03 | 1.83 | 0.84 | 0.80 | 1.47 | 23826 | 2847 | 4 | 54 | 0 | 0 | 0 | logfile |
✘ | 7W9T | 32372 | 2024-03-16 | 2021-12-10 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14841 | 1709 | 8 | 0 | 39 | 0 | 0 | logfile |
✔ | 7VWZ | 32166 | 2024-03-22 | 2021-11-12 | 4.0 | 2.61 | — | 2.6 | 0.006 | 1.01 | 0.0 | 0.06 | 18.64 | 0.01 | 2.148 | 10.68 | 1.10 | 8.8 | 91.0 | 0.2 | -5.04 | 0.59 | 0.58 | — | 2.6 | 0.003 | 0.69 | 0.0 | 0.04 | 19.96 | 0.00 | 2.040 | 15.67 | 4.16 | 8.4 | 91.6 | 0.0 | -2.66 | 0.76 | 0.59 | 0.59 | — | 34509 | 4045 | 11 | 129 | 3 | 0 | 0 | logfile |
✔ | 7QBA | 13885 | 2024-03-21 | 2021-11-18 | 3.78 | 3.61 | — | 3.7 | 0.006 | 1.07 | 18.0 | 0.06 | 14.32 | 0.01 | 1.363 | 16.56 | 0.72 | 5.6 | 94.1 | 0.4 | -1.57 | 0.50 | 0.82 | 2.57 | 3.7 | 0.003 | 0.70 | 0.0 | 0.04 | 16.96 | 0.00 | 1.922 | 15.44 | 3.63 | 5.6 | 94.3 | 0.1 | -1.02 | 0.54 | 0.50 | 0.83 | 1.87 | 20986 | 2694 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 7W5X | 32323 | 2024-03-22 | 2021-11-30 | 3.4 | 2.92 | — | 3.2 | 0.006 | 0.80 | 0.0 | 0.05 | 17.75 | 0.01 | 2.257 | 4.65 | 0.35 | 5.8 | 94.2 | 0.1 | -5.01 | 0.61 | 0.79 | 2.44 | 3.0 | 0.004 | 0.59 | 0.0 | 0.04 | 19.26 | 0.00 | 2.169 | 8.34 | 2.77 | 5.5 | 94.5 | 0.0 | -1.55 | 1.25 | 0.61 | 0.78 | 1.67 | 34265 | 3965 | 9 | 150 | 0 | 0 | 0 | logfile |
✔ | 6M4G | 30077 | 2024-03-14 | 2020-03-06 | 2.8 | 3.16 | — | 3.1 | 0.006 | 0.93 | 0.0 | 0.06 | 25.70 | 0.01 | 2.169 | 14.42 | 2.14 | 2.8 | 97.2 | 0.0 | -6.14 | 0.60 | 0.74 | 3.05 | 3.1 | 0.004 | 0.66 | 0.0 | 0.04 | 28.06 | 0.00 | 2.300 | 10.00 | 3.02 | 1.7 | 98.3 | 0.0 | 1.24 | 1.27 | 0.62 | 0.81 | 2.64 | 9010 | 656 | 10 | 186 | 0 | 0 | 0 | logfile |
✔ | 6WPW | 21866 | 2024-03-14 | 2020-04-28 | 3.1 | 3.57 | — | 3.5 | 0.007 | 0.95 | 0.0 | 0.06 | 10.18 | 0.01 | 1.735 | 6.24 | 0.00 | 5.9 | 94.1 | 0.0 | -4.62 | 0.57 | 0.80 | 4.45 | 3.5 | 0.002 | 0.56 | 0.0 | 0.04 | 14.18 | 0.00 | 2.156 | 8.31 | 2.03 | 3.9 | 96.1 | 0.0 | 0.14 | 0.49 | 0.57 | 0.80 | 3.27 | 9262 | 1176 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WEL | 32451 | 2024-03-14 | 2021-12-23 | 3.2 | 2.95 | — | 3.1 | 0.010 | 1.42 | 4.0 | 0.07 | 18.80 | 0.01 | 1.853 | 23.37 | 0.41 | 4.0 | 95.4 | 0.5 | 1.04 | 0.63 | 0.76 | 1.90 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 16.21 | 0.00 | 2.133 | 8.80 | 1.13 | 4.0 | 95.7 | 0.3 | 1.39 | 0.51 | 0.64 | 0.81 | 2.33 | 9815 | 1102 | 4 | 0 | 34 | 0 | 0 | logfile |
✔ | 7W3Y | 32296 | 2024-03-15 | 2021-11-26 | 3.0 | 3.45 | — | 3.4 | 0.006 | 0.68 | 0.0 | 0.04 | 13.23 | 0.00 | 2.117 | 13.31 | 0.91 | 6.5 | 93.5 | 0.0 | -3.33 | 0.66 | 0.85 | 2.45 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.12 | 0.00 | 2.140 | 9.80 | 2.05 | 4.0 | 96.0 | 0.0 | 0.51 | 0.80 | 0.66 | 0.85 | 2.13 | 12088 | 1492 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7BKD | 12210 | 2024-03-19 | 2021-01-15 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24799 | 3177 | 18 | 0 | 26 | 0 | 0 | logfile |
✔ | 6V0C | 20993 | 2024-03-23 | 2019-11-18 | 3.46 | 3.52 | — | 3.5 | 0.007 | 0.94 | 0.0 | 0.06 | 10.08 | 0.01 | 2.280 | 3.84 | 0.00 | 2.7 | 97.3 | 0.0 | -3.30 | 0.79 | 0.82 | 3.14 | 3.5 | 0.003 | 0.63 | 0.0 | 0.05 | 14.56 | 0.00 | 2.192 | 10.46 | 2.98 | 3.9 | 96.1 | 0.0 | -1.70 | 1.50 | 0.79 | 0.84 | 2.81 | 37920 | 4992 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6C9A | 7435 | 2024-03-15 | 2018-01-25 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12182 | 1446 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 6EE8 | 9039 | 2024-03-21 | 2018-08-13 | 3.92 | 4.56 | — | 4.0 | 0.007 | 1.04 | 2.0 | 0.06 | 16.00 | 0.01 | 2.082 | 7.88 | 0.65 | 6.5 | 93.4 | 0.1 | -3.18 | 0.89 | 0.86 | 1.12 | 4.0 | 0.005 | 0.73 | 0.0 | 0.04 | 17.06 | 0.00 | 1.904 | 16.33 | 2.26 | 6.6 | 93.3 | 0.0 | -0.17 | 1.41 | 0.90 | 0.87 | 0.95 | 29784 | 3508 | 11 | 125 | 3 | 0 | 0 | logfile |
✔ | 7CU3 | 30470 | 2024-03-15 | 2020-08-20 | 2.65 | 2.44 | — | 2.6 | 0.009 | 0.99 | 0.0 | 0.05 | 19.75 | 0.01 | 2.196 | 6.79 | 3.43 | 4.6 | 95.4 | 0.0 | -1.75 | 0.59 | 0.83 | 4.41 | 2.5 | 0.004 | 0.59 | 0.0 | 0.04 | 17.18 | 0.00 | 2.214 | 7.53 | 1.72 | 4.1 | 95.9 | 0.0 | 1.34 | 1.13 | 0.60 | 0.85 | 3.78 | 12209 | 1450 | 3 | 0 | 17 | 0 | 0 | logfile |
✔ | 7W5W | 32322 | 2024-03-22 | 2021-11-30 | 4.55 | 4.63 | — | 4.5 | 0.007 | 1.00 | 0.0 | 0.06 | 18.25 | 0.01 | 1.968 | 11.04 | 0.91 | 6.6 | 93.2 | 0.1 | -4.65 | 0.74 | 0.79 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.04 | 17.20 | 0.00 | 2.086 | 14.95 | 0.03 | 8.3 | 91.7 | 0.0 | -2.07 | 0.82 | 0.75 | 0.80 | — | 33053 | 3877 | 10 | 126 | 3 | 0 | 0 | logfile |
✔ | 7EA8 | 31040 | 2024-03-17 | 2021-03-06 | 3.1 | 3.23 | — | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 24.06 | 0.01 | 2.306 | 1.86 | 0.00 | 3.7 | 96.3 | 0.0 | -3.23 | 0.69 | 0.78 | 2.67 | 3.2 | 0.006 | 0.63 | 0.0 | 0.04 | 25.83 | 0.00 | 2.177 | 5.03 | 1.57 | 6.0 | 94.0 | 0.0 | -0.17 | 0.61 | 0.75 | 0.86 | 2.19 | 12865 | 984 | 12 | 244 | 4 | 0 | 0 | logfile |