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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QTQ | 14145 | 2024-03-11 | 2022-01-15 | 3.3 | 3.53 | — | 3.4 | 0.008 | 0.84 | 4.0 | 0.06 | 15.29 | 0.01 | 2.045 | 9.61 | 0.20 | 10.6 | 89.4 | 0.0 | -2.27 | 0.72 | 0.82 | 2.74 | 3.5 | 0.003 | 0.56 | 2.0 | 0.04 | 15.69 | 0.01 | 1.939 | 8.81 | 0.70 | 7.4 | 92.6 | 0.0 | -1.02 | 0.39 | 0.71 | 0.84 | 2.30 | 54954 | 3577 | 8 | 0 | 24 | 0 | 26821 | logfile |
✘ | 7PNK | 13548 | 2024-03-11 | 2021-09-07 | 3.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60673 | 6142 | 74 | 0 | 250 | 0 | 0 | logfile |
✔ | 6LTJ | 0974 | 2024-03-22 | 2020-01-22 | 3.7 | 4.16 | — | 15.0 | 0.010 | 1.08 | 12.0 | 0.07 | 22.18 | 0.01 | 2.173 | 14.05 | 2.63 | 6.4 | 93.3 | 0.3 | -3.67 | 0.46 | 0.08 | 0.04 | 3.6 | 0.004 | 0.82 | 0.0 | 0.04 | 22.35 | 0.01 | 1.996 | 24.67 | 2.10 | 4.8 | 95.2 | 0.0 | -0.58 | 1.60 | 0.60 | 0.29 | 0.45 | 34283 | 3656 | 21 | 238 | 1 | 0 | 0 | logfile |
✔ | 7QG8 | 13952 | 2024-03-25 | 2021-12-07 | 3.97 | 7.71 | — | 4.0 | 0.016 | 1.62 | 61.0 | 0.11 | 22.93 | 0.01 | 0.770 | 4.86 | 1.61 | 8.6 | 90.4 | 1.0 | -3.97 | 0.64 | 0.40 | 0.16 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 24.56 | 0.01 | 1.902 | 35.77 | 2.68 | 10.2 | 89.7 | 0.1 | -2.28 | 3.35 | 0.84 | 0.76 | -0.02 | 147108 | 5936 | 58 | 4695 | 3 | 9 | 0 | logfile |
✘ | 6XS6 | 22301 | 2024-03-17 | 2020-07-15 | 3.7 | 2.21 | — | 2.2 | 0.004 | 0.83 | 0.0 | 0.05 | 14.26 | 0.01 | 2.240 | 4.49 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.57 | 0.59 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18294 | 2357 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QGU | 13959 | 2024-03-17 | 2021-12-10 | 4.75 | 7.20 | — | 5.6 | 0.010 | 1.50 | 1.0 | 0.04 | 24.12 | 0.02 | 1.064 | 11.45 | 0.26 | 6.6 | 91.0 | 2.3 | -1.82 | 0.70 | 0.57 | — | 5.5 | 0.010 | 1.17 | 0.0 | 0.05 | 26.12 | 0.01 | 1.070 | 79.37 | 0.00 | 10.3 | 88.9 | 0.8 | -1.60 | 2.88 | 0.82 | 0.84 | — | 135606 | 5791 | 54 | 4656 | 0 | 0 | 0 | logfile |
✔ | 7EG9 | 31109 | 2024-03-18 | 2021-03-24 | 3.7 | 4.62 | — | 3.7 | 0.008 | 1.15 | 54.0 | 0.08 | 16.44 | 0.01 | 1.514 | 21.01 | 4.37 | 6.7 | 92.6 | 0.7 | -3.68 | 0.58 | 0.30 | 0.60 | 3.6 | 0.006 | 0.89 | 3.0 | 0.04 | 17.09 | 0.01 | 1.837 | 19.69 | 1.92 | 6.5 | 93.4 | 0.1 | -0.85 | 1.38 | 0.79 | 0.70 | 0.71 | 84318 | 10176 | 49 | 142 | 11 | 0 | 0 | logfile |
✔ | 6RDC | 4813 | 2024-03-10 | 2019-04-12 | 3.2 | 3.06 | — | 3.2 | 0.013 | 1.07 | 1.0 | 0.06 | 13.98 | 0.01 | 1.864 | 5.69 | 0.41 | 5.2 | 94.6 | 0.2 | -5.20 | 0.72 | 0.84 | 3.50 | 3.2 | 0.004 | 0.67 | 1.0 | 0.04 | 15.37 | 0.00 | 1.845 | 9.26 | 2.50 | 3.7 | 96.2 | 0.1 | 0.03 | 1.15 | 0.74 | 0.87 | 2.64 | 53776 | 7103 | 44 | 0 | 11 | 28 | 0 | logfile |
✔ | 6KNF | 0730 | 2024-03-11 | 2019-08-05 | 2.99 | 3.24 | — | 3.2 | 0.007 | 0.63 | 0.0 | 0.05 | 15.04 | 0.00 | 2.015 | 7.65 | 8.82 | 3.6 | 96.4 | 0.0 | -2.46 | 0.83 | 0.91 | 4.90 | 3.2 | 0.005 | 0.57 | 0.0 | 0.05 | 15.28 | 0.00 | 2.016 | 6.67 | 4.41 | 2.2 | 97.8 | 0.0 | -0.76 | 0.92 | 0.83 | 0.92 | 4.47 | 7749 | 1002 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PEA | 13350 | 2024-03-11 | 2021-08-09 | 4.07 | 4.50 | — | 4.2 | 0.002 | 0.47 | 0.0 | 0.04 | 14.26 | 0.00 | 2.239 | 3.98 | 4.24 | 4.7 | 95.3 | 0.0 | -2.53 | 0.84 | 0.72 | — | 4.2 | 0.003 | 0.63 | 0.0 | 0.04 | 13.47 | 0.00 | 2.108 | 10.45 | 0.02 | 3.1 | 96.8 | 0.0 | 0.87 | 1.48 | 0.86 | 0.77 | — | 58252 | 7222 | 10 | 0 | 114 | 0 | 0 | logfile |
✔ | 6XBW | 22121 | 2024-03-12 | 2020-06-07 | 3.37 | 3.48 | — | 3.4 | 0.010 | 1.30 | 80.0 | 0.09 | 15.50 | 0.01 | 1.049 | 8.64 | 0.61 | 3.3 | 96.5 | 0.3 | -5.55 | 0.74 | 0.85 | 2.39 | 3.4 | 0.006 | 0.74 | 0.0 | 0.04 | 16.71 | 0.00 | 2.018 | 11.21 | 3.09 | 5.9 | 94.1 | 0.1 | -0.86 | 0.70 | 0.76 | 0.89 | 2.26 | 63090 | 8186 | 38 | 0 | 18 | 0 | 0 | logfile |
✔ | 6oEE | 20020 | 2024-03-20 | 2019-03-27 | 3.8 | 3.96 | — | 3.8 | 0.008 | 1.19 | 0.0 | 0.06 | 17.19 | 0.01 | 2.159 | 9.17 | 3.57 | 14.9 | 85.1 | 0.0 | -4.60 | 0.35 | 0.74 | 0.83 | 3.8 | 0.003 | 0.77 | 0.0 | 0.04 | 17.99 | 0.00 | 2.232 | 11.49 | 4.24 | 12.8 | 87.2 | 0.0 | -0.94 | 0.96 | 0.35 | 0.75 | 0.75 | 28000 | 3402 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JMN | 22397 | 2024-03-16 | 2020-08-02 | 3.58 | 3.99 | — | 3.8 | 0.004 | 0.83 | 0.0 | 0.05 | 14.64 | 0.01 | 2.115 | 11.08 | 0.07 | 19.3 | 80.2 | 0.6 | -5.81 | 0.79 | 0.78 | 1.61 | 3.8 | 0.003 | 0.80 | 0.0 | 0.04 | 16.43 | 0.01 | 2.164 | 10.14 | 3.84 | 16.3 | 83.4 | 0.2 | -3.65 | 1.22 | 0.78 | 0.77 | 1.14 | 13633 | 1756 | 5 | 0 | 52 | 0 | 0 | logfile |
✔ | 7V4L | 31715 | 2024-03-14 | 2021-08-13 | 3.4 | 3.80 | — | 3.8 | 0.005 | 0.82 | 1.0 | 0.06 | 15.20 | 0.01 | 2.102 | 18.13 | 3.71 | 8.8 | 90.6 | 0.5 | -2.60 | 0.55 | 0.55 | 1.34 | 3.8 | 0.003 | 0.71 | 0.0 | 0.05 | 16.01 | 0.01 | 2.157 | 17.26 | 2.44 | 7.4 | 92.5 | 0.1 | -2.68 | 0.73 | 0.59 | 0.62 | 1.35 | 9345 | 1190 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RE5 | 4842 | 2024-03-10 | 2019-04-12 | 3.2 | 3.28 | — | 3.3 | 0.010 | 0.94 | 0.0 | 0.06 | 14.50 | 0.01 | 2.163 | 5.75 | 0.27 | 4.8 | 95.0 | 0.2 | -3.94 | 0.72 | 0.85 | 2.85 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.82 | 0.00 | 1.927 | 9.50 | 1.99 | 3.7 | 96.2 | 0.1 | 0.24 | 0.45 | 0.71 | 0.86 | 2.23 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7TPK | 26058 | 2024-03-10 | 2022-01-25 | 3.4 | 3.41 | — | 3.4 | 0.011 | 1.40 | 1.0 | 0.08 | 9.83 | 0.01 | 2.528 | 2.12 | 0.00 | 4.7 | 95.3 | 0.0 | -0.98 | 0.60 | 0.72 | 4.39 | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 14.88 | 0.00 | 2.386 | 3.89 | 0.72 | 2.6 | 97.4 | 0.0 | -0.86 | 1.24 | 0.64 | 0.80 | 3.33 | 1484 | 194 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WRV | 32736 | 2024-03-11 | 2022-01-27 | 2.47 | 2.59 | — | 2.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.42 | 0.00 | 2.061 | 3.93 | 0.58 | 2.9 | 97.1 | 0.0 | 0.27 | 0.47 | 0.74 | 3.28 | 2.6 | 0.003 | 0.56 | 0.0 | 0.05 | 16.22 | 0.00 | 2.033 | 4.56 | 1.74 | 5.2 | 94.8 | 0.0 | -0.54 | 1.46 | 0.49 | 0.78 | 2.27 | 6359 | 427 | 3 | 0 | 0 | 0 | 3092 | logfile |
✔ | 6REB | 4848 | 2024-03-10 | 2019-04-12 | 3.2 | 3.24 | — | 3.3 | 0.011 | 1.02 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.40 | 0.37 | 4.8 | 95.1 | 0.1 | -3.95 | 0.70 | 0.84 | 3.18 | 3.3 | 0.003 | 0.64 | 1.0 | 0.04 | 15.80 | 0.00 | 2.044 | 10.48 | 2.17 | 3.6 | 96.3 | 0.1 | 0.03 | 1.15 | 0.71 | 0.87 | 2.46 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6PC5 | 20296 | 2024-03-16 | 2019-06-16 | 2.7 | 3.05 | — | 2.9 | 0.006 | 0.44 | 1.0 | 0.02 | 23.60 | 0.02 | 1.965 | 2.72 | 1.57 | 6.1 | 93.8 | 0.1 | -3.49 | 0.73 | 0.88 | 5.14 | 2.9 | 0.005 | 0.64 | 1.0 | 0.03 | 23.69 | 0.01 | 2.063 | 7.48 | 4.33 | 6.1 | 93.7 | 0.2 | -1.09 | 1.24 | 0.74 | 0.91 | 4.40 | 72206 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7WV4 | 32845 | 2024-03-19 | 2022-02-09 | 3.35 | 3.68 | — | 3.6 | 0.014 | 1.48 | 0.0 | 0.04 | 20.41 | 0.08 | 2.227 | 7.60 | 0.00 | 4.6 | 95.4 | 0.0 | -1.40 | 0.79 | 0.76 | 2.07 | 3.4 | 0.004 | 1.74 | 0.0 | 0.04 | 21.15 | 0.02 | 2.145 | 16.40 | 2.00 | 6.7 | 93.3 | 0.0 | -2.05 | 0.93 | 0.81 | 0.81 | 2.23 | 24490 | 2636 | 6 | 80 | 80 | 0 | 0 | logfile |