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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ToY | 26041 | 2023-04-27 | 2022-01-24 | 3.53 | 3.95 | — | 3.5 | 0.014 | 1.77 | 4.0 | 0.10 | 13.68 | 0.01 | 2.517 | 0.08 | 1.50 | 6.8 | 92.8 | 0.4 | -1.10 | 0.85 | 0.84 | 2.97 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.23 | 0.00 | 2.190 | 5.85 | 0.26 | 4.3 | 95.6 | 0.1 | 0.35 | 0.49 | 0.85 | 0.85 | 2.13 | 24673 | 3049 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7LYQ | 23599 | 2023-04-26 | 2021-03-07 | 3.34 | 3.59 | — | 3.6 | 0.013 | 1.74 | 1.0 | 0.10 | 12.83 | 0.01 | 2.521 | 0.30 | 0.43 | 5.2 | 94.3 | 0.4 | -0.83 | 0.77 | 0.83 | 3.22 | 3.5 | 0.005 | 0.63 | 0.0 | 0.04 | 14.34 | 0.00 | 2.202 | 5.36 | 0.24 | 3.7 | 96.3 | 0.0 | 0.32 | 1.24 | 0.79 | 0.86 | 2.66 | 23641 | 2985 | 6 | 0 | 38 | 0 | 0 | logfile |
✔ | 7SV7 | 25445 | 2023-04-21 | 2021-11-18 | 3.8 | 3.26 | — | 3.9 | 0.004 | 1.02 | 0.0 | 0.04 | 12.31 | 0.00 | 2.003 | 1.99 | 0.69 | 2.2 | 97.8 | 0.0 | -0.82 | 0.60 | 0.81 | 2.35 | 3.9 | 0.002 | 0.55 | 0.0 | 0.04 | 15.41 | 0.00 | 1.999 | 5.52 | 0.30 | 2.5 | 97.5 | 0.0 | 1.05 | 0.59 | 0.61 | 0.81 | 1.47 | 9673 | 1173 | 3 | 0 | 32 | 0 | 0 | logfile |
✘ | 7TLB | 25986 | 2023-04-26 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.11 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KEC | 22838 | 2023-04-26 | 2020-10-10 | 3.84 | 4.76 | — | 3.9 | 0.013 | 1.81 | 0.0 | 0.09 | 14.51 | 0.02 | 2.280 | 0.83 | 2.39 | 9.0 | 89.9 | 1.0 | -2.05 | 0.74 | 0.62 | 0.75 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 14.52 | 0.00 | 2.075 | 17.12 | 0.49 | 7.0 | 92.9 | 0.1 | -0.91 | 0.62 | 0.86 | 0.80 | 0.83 | 22337 | 2875 | 18 | 0 | 57 | 0 | 0 | logfile |
✔ | 7TPF | 26053 | 2023-04-26 | 2022-01-25 | 3.4 | 3.74 | — | 3.4 | 0.013 | 1.76 | 3.0 | 0.09 | 12.86 | 0.01 | 2.518 | 0.04 | 0.72 | 6.1 | 93.5 | 0.3 | -0.86 | 0.84 | 0.86 | 3.82 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 13.55 | 0.00 | 2.187 | 4.30 | 0.17 | 4.2 | 95.7 | 0.1 | 0.28 | 0.45 | 0.85 | 0.87 | 3.14 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7ToU | 26038 | 2023-04-27 | 2022-01-24 | 3.24 | 3.49 | — | 3.3 | 0.014 | 1.82 | 8.0 | 0.11 | 13.56 | 0.01 | 2.517 | 0.18 | 1.20 | 6.2 | 93.2 | 0.7 | -1.00 | 0.84 | 0.85 | 3.52 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 14.04 | 0.00 | 2.134 | 5.38 | 0.04 | 4.2 | 95.7 | 0.0 | 0.51 | 0.57 | 0.85 | 0.87 | 2.72 | 24687 | 3050 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7L1V | 23119 | 2023-04-21 | 2020-12-15 | 3.0 | 3.37 | — | 3.3 | 0.007 | 0.91 | 0.0 | 0.06 | 12.65 | 0.01 | 2.306 | 3.23 | 0.30 | 2.8 | 97.2 | 0.0 | -2.91 | 0.71 | 0.86 | 4.16 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.41 | 0.00 | 2.230 | 6.79 | 2.02 | 2.3 | 97.7 | 0.0 | 0.66 | 0.93 | 0.73 | 0.88 | 3.17 | 9606 | 1253 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PM0 | 20382 | 2023-04-23 | 2019-07-01 | 3.1 | 3.53 | — | 3.3 | 0.007 | 1.03 | 0.0 | 0.06 | 9.72 | 0.01 | 2.298 | 5.10 | 0.00 | 4.1 | 95.9 | 0.0 | -4.55 | 0.78 | 0.84 | 4.35 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 14.42 | 0.00 | 2.110 | 10.24 | 0.53 | 3.9 | 96.1 | 0.0 | -0.36 | 0.72 | 0.77 | 0.89 | 3.90 | 14080 | 1730 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7PV2 | 13664 | 2023-04-27 | 2021-10-01 | 3.2 | 3.39 | — | 3.3 | 0.011 | 0.71 | 0.0 | 0.08 | 14.85 | 0.00 | 1.971 | 4.86 | 0.00 | 3.9 | 96.1 | 0.0 | -3.84 | 0.75 | 0.82 | 3.34 | 3.3 | 0.005 | 0.62 | 0.0 | 0.04 | 16.71 | 0.00 | 2.164 | 6.26 | 0.22 | 3.8 | 96.2 | 0.0 | -0.11 | 0.60 | 0.76 | 0.87 | 2.77 | 25440 | 3084 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SK5 | 25173 | 2023-04-23 | 2021-10-19 | 4.0 | 4.30 | — | 4.2 | 0.004 | 0.63 | 0.0 | 0.06 | 13.93 | 0.00 | 1.998 | 6.42 | 0.00 | 4.7 | 95.3 | 0.0 | 0.50 | 0.69 | 0.81 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 15.66 | 0.00 | 1.979 | 10.91 | 0.63 | 4.9 | 95.1 | 0.0 | -0.06 | 0.47 | 0.69 | 0.80 | — | 14160 | 897 | 7 | 0 | 7 | 0 | 6928 | logfile |
✔ | 7TYM | 26185 | 2023-04-22 | 2022-02-13 | 3.4 | 3.43 | — | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 15.94 | 0.00 | 2.175 | 8.12 | 0.00 | 7.1 | 92.8 | 0.1 | -1.35 | 0.73 | 0.81 | 2.62 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 16.28 | 0.00 | 2.159 | 8.66 | 0.15 | 8.0 | 92.0 | 0.0 | -1.76 | 1.12 | 0.73 | 0.82 | 3.21 | 12112 | 1542 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KE7 | 22833 | 2023-04-26 | 2020-10-10 | 3.32 | 3.94 | — | 3.7 | 0.014 | 1.74 | 5.0 | 0.10 | 13.16 | 0.02 | 2.502 | 0.38 | 0.08 | 7.5 | 92.2 | 0.3 | -1.34 | 0.75 | 0.69 | 2.06 | 3.7 | 0.005 | 0.72 | 0.0 | 0.05 | 14.48 | 0.00 | 2.124 | 10.07 | 0.31 | 5.3 | 94.7 | 0.0 | -0.44 | 0.66 | 0.81 | 0.77 | 1.73 | 23688 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7ToZ | 26042 | 2023-04-27 | 2022-01-24 | 4.07 | 4.80 | — | 4.0 | 0.014 | 1.84 | 11.0 | 0.10 | 15.16 | 0.02 | 2.509 | 0.68 | 2.87 | 8.7 | 90.4 | 0.8 | -1.96 | 0.85 | 0.79 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.43 | 0.00 | 2.095 | 13.67 | 0.00 | 7.1 | 92.8 | 0.1 | -0.56 | 0.58 | 0.85 | 0.80 | — | 24470 | 3026 | 20 | 0 | 60 | 0 | 0 | logfile |
✔ | 7SK8 | 25176 | 2023-04-22 | 2021-10-19 | 3.3 | 3.55 | — | 3.5 | 0.009 | 0.88 | 0.0 | 0.22 | 14.30 | 0.00 | 2.265 | 2.62 | 0.00 | 5.2 | 94.8 | 0.0 | -0.08 | 0.70 | 0.83 | 3.30 | 3.5 | 0.003 | 0.48 | 0.0 | 0.04 | 15.06 | 0.00 | 2.153 | 4.37 | 0.00 | 5.2 | 94.8 | 0.0 | 0.17 | 0.29 | 0.69 | 0.83 | 3.37 | 13389 | 835 | 7 | 0 | 8 | 0 | 6513 | logfile |
✔ | 7LWQ | 23554 | 2023-04-25 | 2021-03-01 | 3.44 | 3.73 | — | 3.6 | 0.013 | 1.77 | 3.0 | 0.10 | 13.84 | 0.01 | 2.519 | 0.05 | 1.18 | 6.6 | 93.1 | 0.4 | -1.34 | 0.77 | 0.79 | 2.74 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 15.04 | 0.00 | 2.183 | 6.77 | 0.24 | 3.8 | 96.2 | 0.0 | 0.36 | 1.27 | 0.77 | 0.80 | 2.05 | 19273 | 2425 | 7 | 0 | 29 | 0 | 0 | logfile |
✔ | 7KDJ | 22824 | 2023-04-26 | 2020-10-08 | 3.49 | 4.11 | — | 3.8 | 0.013 | 1.69 | 1.0 | 0.10 | 12.36 | 0.01 | 1.477 | 0.25 | 0.49 | 6.4 | 93.2 | 0.4 | -0.75 | 0.80 | 0.79 | 2.84 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 13.66 | 0.00 | 2.204 | 5.88 | 0.13 | 3.6 | 96.4 | 0.0 | 0.57 | 0.54 | 0.84 | 0.84 | 2.15 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7RBT | 24401 | 2023-04-22 | 2021-07-06 | 3.08 | 2.86 | — | 2.9 | 0.007 | 0.76 | 0.0 | 0.05 | 14.73 | 0.00 | 2.093 | 18.60 | 0.70 | 9.1 | 90.9 | 0.0 | -2.82 | 0.59 | 0.76 | 2.17 | 3.0 | 0.004 | 0.75 | 0.0 | 0.04 | 16.65 | 0.00 | 2.134 | 12.58 | 0.26 | 4.4 | 95.6 | 0.0 | -0.87 | 0.49 | 0.59 | 0.77 | 2.09 | 10881 | 1386 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 6SE6 | 10152 | 2023-04-22 | 2019-07-29 | 3.5 | 4.16 | — | 3.9 | 0.010 | 1.00 | 0.0 | 0.06 | 28.15 | 0.01 | 2.247 | 3.86 | 0.00 | 1.2 | 98.8 | 0.0 | -3.83 | 0.88 | 0.85 | 1.92 | 3.9 | 0.004 | 0.65 | 0.0 | 0.03 | 28.61 | 0.00 | 2.082 | 12.77 | 0.47 | 1.5 | 98.5 | 0.0 | 1.17 | 0.58 | 0.86 | 0.83 | 1.17 | 12068 | 771 | 11 | 290 | 0 | 0 | 0 | logfile |
✔ | 7Z3A | 14474 | 2023-04-26 | 2022-03-02 | 3.95 | 4.30 | — | 4.1 | 0.024 | 1.92 | 0.0 | 0.16 | 10.35 | 0.01 | 1.982 | 1.57 | 0.41 | 2.7 | 97.3 | 0.0 | 0.25 | 0.80 | 0.79 | 1.88 | 4.1 | 0.003 | 0.90 | 0.0 | 0.05 | 14.91 | 0.00 | 2.140 | 12.52 | 0.33 | 5.6 | 94.4 | 0.0 | -0.21 | 1.50 | 0.81 | 0.83 | 1.39 | 24000 | 2793 | 69 | 0 | 156 | 0 | 0 | logfile |