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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7BW4 | 30226 | 2022-04-04 | 2020-04-13 | 3.7 | 3.92 | — | 3.8 | 0.004 | 0.66 | 1.0 | 0.05 | 15.16 | 0.00 | 2.078 | 16.25 | 1.68 | 4.3 | 95.5 | 0.2 | -2.50 | 0.77 | 0.77 | 1.82 | 3.8 | 0.006 | 0.82 | 0.0 | 0.05 | 16.63 | 0.01 | 2.176 | 15.60 | 0.63 | 5.1 | 94.8 | 0.1 | -0.84 | 1.08 | 0.78 | 0.77 | 1.65 | 8605 | 1078 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7BST | 30166 | 2022-04-09 | 2020-03-31 | 4.37 | 4.53 | — | 4.3 | 0.004 | 1.02 | 1.0 | 0.06 | 11.11 | 0.01 | 2.232 | 7.20 | 0.56 | 10.3 | 89.7 | 0.0 | -4.41 | 0.86 | 0.72 | — | 4.3 | 0.002 | 0.70 | 0.0 | 0.04 | 12.19 | 0.00 | 2.161 | 12.57 | 0.00 | 7.8 | 92.2 | 0.0 | -1.17 | 1.60 | 0.88 | 0.75 | — | 28266 | 3508 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6U6D | 20663 | 2022-04-06 | 2019-08-29 | 3.6 | 3.73 | — | 3.7 | 0.002 | 0.51 | 0.0 | 0.04 | 12.89 | 0.00 | 2.227 | 6.53 | 0.00 | 3.4 | 96.6 | 0.0 | -4.06 | 0.79 | 0.84 | 1.77 | 3.7 | 0.003 | 0.54 | 0.0 | 0.05 | 15.59 | 0.00 | 2.142 | 6.80 | 0.22 | 3.3 | 96.7 | 0.0 | -0.81 | 0.47 | 0.80 | 0.84 | 2.03 | 16770 | 2156 | 10 | 0 | 2 | 0 | 0 | logfile |
✔ | 6L4S | 0833 | 2022-04-04 | 2019-10-21 | 3.37 | 3.47 | — | 4.0 | 0.014 | 1.36 | 0.0 | 0.09 | 10.28 | 0.01 | 2.408 | 7.28 | 0.00 | 5.7 | 94.3 | 0.0 | -3.73 | 0.28 | 0.67 | 4.12 | 4.1 | 0.008 | 0.87 | 0.0 | 0.06 | 15.50 | 0.00 | 2.214 | 12.64 | 0.44 | 14.5 | 85.5 | 0.0 | -3.63 | 3.12 | 0.35 | 0.75 | 2.16 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Z16 | 11027 | 2022-04-07 | 2020-05-12 | 2.98 | 2.98 | — | 3.1 | 0.008 | 1.13 | 0.0 | 0.06 | 12.51 | 0.01 | 2.238 | 3.49 | 0.10 | 4.5 | 95.5 | 0.0 | -2.64 | 0.73 | 0.83 | 3.55 | 3.0 | 0.005 | 0.73 | 0.0 | 0.04 | 15.75 | 0.01 | 2.061 | 10.88 | 2.27 | 4.7 | 95.3 | 0.0 | 0.84 | 1.31 | 0.75 | 0.83 | 2.85 | 30250 | 3744 | 24 | 0 | 30 | 0 | 0 | logfile |
✔ | 6VX6 | 21431 | 2022-04-05 | 2020-02-21 | 3.0 | 3.24 | — | 3.2 | 0.005 | 0.82 | 0.0 | 0.05 | 14.09 | 0.00 | 2.260 | 4.77 | 0.94 | 1.9 | 98.1 | 0.0 | -5.69 | 0.76 | 0.87 | 3.72 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 16.34 | 0.00 | 2.054 | 7.91 | 1.57 | 1.5 | 98.5 | 0.0 | 0.59 | 0.98 | 0.78 | 0.89 | 3.36 | 15061 | 1830 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6WCC | 21606 | 2022-04-05 | 2020-03-30 | 3.24 | 3.27 | — | 3.3 | 0.003 | 0.51 | 0.0 | 0.03 | 15.73 | 0.00 | 2.025 | 4.39 | 2.26 | 0.8 | 99.2 | 0.0 | 1.46 | 0.53 | 0.76 | 1.58 | 3.3 | 0.003 | 0.52 | 0.0 | 0.03 | 15.73 | 0.00 | 2.212 | 7.06 | 0.32 | 2.6 | 97.4 | 0.0 | 4.20 | 0.73 | 0.52 | 0.78 | 1.78 | 11629 | 734 | 6 | 0 | 5 | 12 | 5908 | logfile |
✔ | 6X5i | 22051 | 2022-04-04 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.061 | 3.24 | 210.0 | 0.20 | 32.42 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.010 | 1.61 | 210.0 | 0.14 | 27.26 | 0.00 | 1.233 | 70.93 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.50 | 0.68 | 0.73 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 6WCA | 21604 | 2022-04-05 | 2020-03-30 | 3.03 | 3.15 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 15.59 | 0.00 | 2.102 | 8.00 | 1.94 | 3.0 | 97.0 | 0.0 | -0.15 | 0.54 | 0.77 | 2.04 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.80 | 0.00 | 1.829 | 6.37 | 0.00 | 2.3 | 97.7 | 0.0 | 3.33 | 0.64 | 0.54 | 0.79 | 2.03 | 11645 | 734 | 6 | 0 | 5 | 26 | 5910 | logfile |
✔ | 6TEB | 10479 | 2022-04-05 | 2019-11-11 | 4.14 | 4.24 | — | 4.1 | 0.007 | 1.14 | 0.0 | 0.07 | 13.67 | 0.01 | 2.286 | 20.34 | 1.20 | 16.7 | 83.1 | 0.2 | -5.28 | 0.73 | 0.75 | — | 4.1 | 0.004 | 0.95 | 0.0 | 0.05 | 14.17 | 0.01 | 2.146 | 25.55 | 0.32 | 11.0 | 89.0 | 0.0 | -3.58 | 1.91 | 0.75 | 0.77 | — | 12168 | 1584 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUM | 21916 | 2022-04-05 | 2020-05-04 | 3.6 | 3.74 | — | 3.7 | 0.008 | 0.92 | 0.0 | 0.05 | 13.76 | 0.01 | 2.086 | 10.52 | 1.01 | 16.4 | 83.5 | 0.1 | -4.27 | 0.75 | 0.82 | 2.44 | 3.6 | 0.005 | 0.78 | 0.0 | 0.04 | 15.09 | 0.01 | 2.219 | 9.57 | 0.41 | 10.9 | 89.1 | 0.1 | -1.95 | 0.55 | 0.74 | 0.80 | 1.72 | 16414 | 2172 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TSV | 10566 | 2022-04-07 | 2019-12-21 | 3.78 | 3.86 | — | 3.8 | 0.011 | 1.20 | 0.0 | 0.08 | 11.73 | 0.01 | 2.334 | 11.82 | 0.00 | 10.6 | 89.4 | 0.0 | -4.47 | 0.82 | 0.85 | 2.68 | 3.8 | 0.005 | 0.95 | 0.0 | 0.05 | 16.80 | 0.00 | 2.107 | 23.57 | 1.40 | 9.7 | 90.3 | 0.0 | -2.84 | 1.69 | 0.84 | 0.86 | 1.00 | 23832 | 3216 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TG9 | 10495 | 2022-04-07 | 2019-11-15 | 3.24 | 3.34 | — | 3.3 | 0.016 | 1.33 | 0.0 | 0.06 | 14.65 | 0.00 | 1.847 | 11.53 | 0.62 | 7.8 | 92.0 | 0.2 | -4.02 | 0.80 | 0.78 | 3.11 | 3.3 | 0.008 | 0.92 | 0.0 | 0.04 | 16.37 | 0.01 | 2.083 | 11.45 | 0.04 | 6.0 | 93.9 | 0.1 | -1.30 | 1.25 | 0.83 | 0.84 | 2.94 | 25412 | 3318 | 14 | 0 | 26 | 0 | 0 | logfile |
✔ | 6LCR | 0873 | 2022-04-05 | 2019-11-19 | 3.4 | 3.53 | — | 3.5 | 0.009 | 0.96 | 0.0 | 0.07 | 15.47 | 0.01 | 1.914 | 20.54 | 0.49 | 11.6 | 88.2 | 0.2 | -4.30 | 0.69 | 0.79 | 2.44 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.46 | 0.01 | 1.939 | 13.75 | 0.33 | 7.3 | 92.6 | 0.1 | -1.72 | 1.17 | 0.69 | 0.79 | 1.49 | 11561 | 1420 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 6WUN | 21917 | 2022-04-05 | 2020-05-04 | 3.9 | 4.00 | — | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 13.70 | 0.00 | 2.166 | 14.26 | 1.14 | 18.4 | 81.6 | 0.0 | -6.35 | 0.68 | 0.80 | 1.75 | 3.9 | 0.005 | 0.83 | 0.0 | 0.04 | 14.96 | 0.00 | 2.101 | 13.17 | 0.09 | 17.2 | 82.6 | 0.2 | -4.00 | 0.56 | 0.68 | 0.80 | 1.50 | 10082 | 1326 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UR8 | 20857 | 2022-04-05 | 2019-10-22 | 3.71 | 3.88 | — | 3.9 | 0.008 | 0.79 | 0.0 | 0.05 | 13.48 | 0.00 | 1.970 | 10.98 | 0.06 | 9.6 | 90.4 | 0.0 | -4.52 | 0.72 | 0.78 | 1.62 | 3.9 | 0.005 | 0.77 | 0.0 | 0.04 | 16.09 | 0.01 | 2.102 | 7.30 | 0.42 | 5.1 | 94.9 | 0.0 | -0.62 | 1.43 | 0.76 | 0.83 | 1.54 | 14880 | 1798 | 10 | 0 | 13 | 0 | 0 | logfile |
✔ | 6U5P | 20652 | 2022-04-05 | 2019-08-28 | 3.3 | 3.44 | — | 3.4 | 0.006 | 0.75 | 0.0 | 0.05 | 14.37 | 0.00 | 2.236 | 3.96 | 0.43 | 4.4 | 95.6 | 0.0 | -3.37 | 0.70 | 0.83 | 2.56 | 3.4 | 0.003 | 0.52 | 0.0 | 0.05 | 16.25 | 0.00 | 2.070 | 5.59 | 0.36 | 2.9 | 97.1 | 0.0 | 0.03 | 0.46 | 0.66 | 0.83 | 2.12 | 13308 | 1776 | 24 | 0 | 24 | 8 | 0 | logfile |
✔ | 6LCP | 0872 | 2022-04-05 | 2019-11-19 | 3.48 | 3.62 | — | 3.5 | 0.009 | 0.95 | 5.0 | 0.07 | 15.52 | 0.01 | 1.795 | 17.99 | 0.99 | 9.8 | 90.0 | 0.2 | -4.12 | 0.72 | 0.81 | 2.71 | 3.5 | 0.011 | 0.99 | 1.0 | 0.04 | 16.91 | 0.01 | 1.869 | 12.82 | 0.46 | 7.0 | 92.8 | 0.1 | -1.45 | 1.20 | 0.72 | 0.82 | 1.94 | 12421 | 1516 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 6U5R | 20653 | 2022-04-05 | 2019-08-28 | 3.6 | 3.71 | — | 3.6 | 0.011 | 0.96 | 0.0 | 0.06 | 14.54 | 0.01 | 1.768 | 5.09 | 0.23 | 6.2 | 93.8 | 0.0 | -4.18 | 0.73 | 0.85 | 2.03 | 3.7 | 0.003 | 0.58 | 0.0 | 0.05 | 16.88 | 0.00 | 2.241 | 7.11 | 0.17 | 2.8 | 97.2 | 0.0 | 0.17 | 0.58 | 0.70 | 0.83 | 0.77 | 16516 | 2156 | 24 | 0 | 8 | 8 | 0 | logfile |
✔ | 6LY8 | 30014 | 2022-04-07 | 2020-02-13 | 3.5 | 3.61 | — | 3.5 | 0.006 | 0.68 | 0.0 | 0.05 | 15.32 | 0.01 | 1.805 | 6.75 | 11.59 | 11.1 | 88.9 | 0.0 | -4.29 | 0.77 | 0.85 | 2.29 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 15.96 | 0.01 | 2.129 | 6.34 | 0.46 | 8.2 | 91.7 | 0.0 | -1.32 | 0.57 | 0.77 | 0.85 | 1.71 | 26631 | 3418 | 9 | 0 | 1 | 0 | 0 | logfile |