Table showing results for April 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7TPA	26050	2022-04-06	2022-01-25	3.6	3.99	—	3.6	0.013	1.74	3.0	0.09	12.83	0.01	2.510	0.00	1.11	6.5	92.8	0.8	-1.19	0.84	0.85	2.96	3.6	0.004	0.61	0.0	0.04	13.28	0.00	2.074	4.52	0.21	4.6	95.2	0.2	0.36	0.46	0.84	0.85	2.47	23199	2983	18	0	58	0	0	logfile
✔	7QWG	14187	2022-04-04	2022-01-25	3.38	3.26	2.98	3.3	0.012	2.34	10.0	0.15	14.89	0.01	2.525	0.31	0.26	10.0	90.0	0.0	-3.26	0.41	0.82	4.16	3.3	0.004	0.75	0.0	0.05	16.86	0.00	2.210	9.22	0.79	11.3	88.7	0.0	-3.53	2.41	0.38	0.83	3.45	3258	405	3	0	0	0	0	logfile
✔	7TPL	26059	2022-04-06	2022-01-25	3.87	4.36	—	3.8	0.013	1.79	10.0	0.10	13.96	0.02	2.519	0.35	1.94	8.6	90.3	1.1	-1.79	0.84	0.83	2.53	3.8	0.007	0.78	0.0	0.05	14.59	0.00	2.028	12.25	0.32	8.2	91.7	0.1	-0.49	0.55	0.84	0.84	1.55	19992	2485	18	0	46	0	0	logfile
✔	7TP9	26049	2022-04-06	2022-01-25	3.48	3.86	—	3.5	0.013	1.76	6.0	0.09	12.66	0.01	2.518	0.02	0.94	6.9	92.4	0.7	-0.96	0.84	0.84	3.41	3.5	0.004	0.63	0.0	0.04	13.46	0.00	2.021	5.60	0.13	5.8	94.1	0.1	0.17	0.49	0.85	0.86	2.70	23199	2983	18	0	58	0	0	logfile
✔	7QWR	14192	2022-04-08	2022-01-25	2.9	2.44	—	2.9	0.002	0.47	0.0	0.03	14.58	0.00	2.054	7.58	0.72	5.1	94.8	0.1	-0.61	0.48	0.71	2.26	2.7	0.004	0.73	0.0	0.04	17.50	0.01	1.879	8.40	4.52	5.9	94.1	0.0	-0.82	1.38	0.52	0.80	2.93	134576	6621	55	3769	126	0	0	logfile
✔	7TPC	26051	2022-04-06	2022-01-25	3.91	4.55	—	3.9	0.013	1.83	4.0	0.10	13.79	0.02	2.508	0.42	2.26	8.8	90.1	1.0	-2.02	0.83	0.77	0.71	3.9	0.003	0.65	0.0	0.04	14.01	0.00	2.175	10.63	0.34	6.8	93.2	0.1	-0.90	0.53	0.83	0.78	0.67	23199	2983	18	0	58	0	0	logfile
✔	7TP7	26047	2022-04-06	2022-01-25	3.48	3.94	—	3.5	0.013	1.76	6.0	0.10	12.82	0.01	2.509	0.13	1.15	7.1	92.3	0.7	-1.13	0.84	0.84	3.20	3.5	0.003	0.59	0.0	0.04	13.56	0.00	2.156	5.00	0.17	3.9	96.0	0.1	0.32	0.49	0.84	0.86	2.63	23199	2983	18	0	58	0	0	logfile
✔	7QWM	14189	2022-04-04	2022-01-25	2.76	2.21	2.43	2.2	0.012	1.93	3.0	0.11	13.26	0.01	2.502	0.15	0.00	8.0	92.0	0.0	-2.89	0.34	0.80	6.86	2.2	0.004	0.70	0.0	0.05	18.21	0.00	2.103	9.69	0.53	6.8	93.2	0.0	-2.77	0.60	0.38	0.82	6.27	3255	405	3	0	0	0	0	logfile
✘	7QWQ	14191	2022-04-09	2022-01-25	2.83	2.26	—	2.7	0.002	0.53	0.0	0.03	14.96	0.01	1.516	9.13	0.03	4.6	95.4	0.0	0.48	0.46	0.66	1.64	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	143809	7312	59	3936	158	0	0	logfile
✘	7QWS	14193	2022-04-08	2022-01-25	3.4	3.09	—	7.2	0.002	0.46	0.0	0.03	14.64	0.00	2.011	9.43	1.65	3.7	96.3	0.0	0.47	0.23	0.02	-0.02	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	137913	7047	55	3769	126	0	0	logfile
✔	7TPH	26055	2022-04-06	2022-01-25	3.58	4.03	—	3.6	0.013	1.75	5.0	0.09	12.22	0.01	2.501	0.14	1.01	7.2	92.3	0.6	-1.01	0.84	0.85	3.36	3.6	0.004	0.58	0.0	0.04	12.78	0.00	2.203	4.83	0.00	5.1	94.8	0.1	0.30	1.93	0.84	0.86	2.46	22180	2912	14	0	52	0	0	logfile
✔	7TP8	26048	2022-04-06	2022-01-25	3.4	3.77	—	3.4	0.013	1.75	6.0	0.09	12.89	0.01	2.519	0.07	0.98	6.3	92.8	0.9	-0.98	0.84	0.85	4.23	3.4	0.003	0.58	0.0	0.04	13.46	0.00	2.221	3.94	0.13	4.5	95.4	0.1	0.27	1.60	0.85	0.86	2.89	23199	2983	18	0	58	0	0	logfile
✔	7TP2	26046	2022-04-07	2022-01-24	3.72	4.22	—	3.7	0.013	1.75	6.0	0.10	13.56	0.01	2.529	0.18	1.32	7.2	92.4	0.4	-1.34	0.85	0.84	2.45	3.7	0.003	0.60	0.0	0.04	13.99	0.00	2.148	6.99	0.11	4.4	95.5	0.1	0.06	0.47	0.85	0.85	1.67	24663	3047	20	0	61	0	0	logfile
✔	7TP1	26045	2022-04-07	2022-01-24	3.81	4.30	—	3.8	0.013	1.74	5.0	0.10	13.54	0.01	2.523	0.21	1.39	6.7	92.4	0.9	-1.32	0.85	0.84	1.81	3.8	0.005	0.68	0.0	0.05	13.93	0.00	2.046	8.51	0.00	5.3	94.7	0.1	0.20	0.49	0.86	0.85	1.69	24646	3046	20	0	61	0	0	logfile
✔	7ToV	26039	2022-04-06	2022-01-24	3.16	3.39	—	3.2	0.013	1.79	5.0	0.09	12.54	0.01	2.515	0.07	0.89	5.8	93.7	0.4	-0.81	0.83	0.86	4.13	3.2	0.004	0.65	0.0	0.04	13.24	0.01	2.007	4.21	0.13	3.9	96.0	0.1	0.45	0.53	0.84	0.87	3.22	23199	2983	18	0	58	0	0	logfile
✔	7TP0	26043	2022-04-07	2022-01-24	3.57	3.99	—	3.6	0.013	1.75	4.0	0.10	13.44	0.01	2.527	0.27	1.62	6.6	92.6	0.8	-1.08	0.85	0.85	2.66	3.6	0.003	0.60	0.0	0.04	13.94	0.00	2.066	6.20	0.00	4.6	95.3	0.2	0.29	1.19	0.86	0.85	2.17	24589	3040	20	0	61	0	0	logfile
✔	7ToX	26040	2022-04-07	2022-01-24	3.62	4.01	—	3.6	0.013	1.75	1.0	0.10	13.49	0.01	2.515	0.14	1.35	6.7	92.8	0.5	-1.12	0.85	0.84	2.42	3.6	0.005	0.64	0.0	0.04	14.17	0.00	2.141	7.45	0.08	5.3	94.6	0.1	-0.05	0.49	0.85	0.85	2.00	24618	3041	20	0	61	0	0	logfile
✔	7ToU	26038	2022-04-07	2022-01-24	3.24	3.49	—	3.3	0.013	1.81	8.0	0.11	13.36	0.01	2.517	0.16	1.20	6.2	93.2	0.7	-1.00	0.84	0.85	3.52	3.3	0.003	0.60	0.0	0.04	13.84	0.00	2.148	5.27	0.11	4.3	95.7	0.0	0.42	0.58	0.85	0.87	2.72	24687	3050	20	0	61	0	0	logfile
✔	7ToZ	26042	2022-04-07	2022-01-24	4.07	4.80	—	4.0	0.013	1.82	11.0	0.10	14.94	0.02	2.509	0.66	2.87	8.7	90.4	0.8	-1.96	0.85	0.79	—	4.0	0.004	0.70	0.0	0.04	13.25	0.00	2.081	15.08	0.04	7.4	92.5	0.1	-0.81	0.57	0.85	0.80	—	24470	3026	20	0	60	0	0	logfile
✔	7ToY	26041	2022-04-07	2022-01-24	3.53	3.95	—	3.5	0.013	1.76	4.0	0.10	13.48	0.01	2.517	0.08	1.50	6.8	92.8	0.4	-1.10	0.85	0.84	2.97	3.5	0.004	0.63	0.0	0.04	14.06	0.00	2.150	6.49	0.15	4.3	95.6	0.1	0.25	0.49	0.85	0.85	2.16	24673	3049	20	0	61	0	0	logfile

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