The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WHK | 32503 | 2023-04-29 | 2021-12-30 | 3.01 | 2.59 | — | 3.1 | 0.004 | 0.70 | 1.0 | 0.05 | 11.56 | 0.01 | 2.208 | 7.01 | 6.30 | 5.6 | 94.1 | 0.3 | -3.45 | 0.78 | 0.76 | 2.28 | 3.0 | 0.003 | 0.74 | 0.0 | 0.05 | 14.08 | 0.00 | 2.041 | 11.38 | 0.41 | 6.3 | 93.6 | 0.0 | -1.41 | 0.71 | 0.79 | 0.82 | 2.57 | 29150 | 3697 | 11 | 0 | 28 | 0 | 0 | logfile |
✔ | 8HK1 | 34841 | 2023-04-29 | 2022-11-24 | 2.7 | 2.81 | 2.75 | 2.9 | 0.005 | 0.89 | 3.0 | 0.13 | 16.22 | 0.01 | 1.262 | 10.95 | 5.96 | 3.6 | 96.3 | 0.1 | -2.81 | 0.56 | 0.61 | 2.14 | 2.8 | 0.005 | 0.78 | 0.0 | 0.05 | 16.67 | 0.00 | 2.036 | 7.86 | 4.06 | 5.1 | 94.9 | 0.0 | 0.06 | 1.31 | 0.66 | 0.81 | 2.51 | 30236 | 4205 | 24 | 148 | 5 | 0 | 0 | logfile |
✔ | 7WJY | 32552 | 2023-04-29 | 2022-01-08 | 3.24 | 2.33 | — | 2.1 | 0.003 | 0.70 | 0.0 | 0.05 | 10.47 | 0.01 | 2.216 | 8.31 | 6.82 | 8.1 | 91.6 | 0.2 | -4.98 | 0.69 | 0.71 | 2.44 | 2.1 | 0.006 | 0.75 | 0.0 | 0.05 | 14.07 | 0.01 | 2.092 | 11.26 | 0.56 | 10.2 | 89.8 | 0.0 | -2.18 | 0.70 | 0.75 | 0.78 | 2.58 | 29429 | 3756 | 10 | 0 | 24 | 0 | 0 | logfile |
✔ | 6ZN5 | 11310 | 2023-04-29 | 2020-07-06 | 3.2 | 3.14 | — | 3.1 | 0.011 | 1.16 | 0.0 | 0.06 | 17.49 | 0.01 | 2.124 | 5.06 | 0.53 | 6.9 | 92.9 | 0.1 | -4.30 | 0.80 | 0.80 | 2.26 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 17.53 | 0.00 | 2.106 | 10.23 | 0.53 | 5.1 | 94.8 | 0.0 | -1.22 | 0.45 | 0.82 | 0.82 | 1.93 | 79377 | 5478 | 39 | 1671 | 3 | 0 | 0 | logfile |
✔ | 7VAL | 31849 | 2023-04-29 | 2021-08-30 | 3.1 | 2.59 | 2.99 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 12.97 | 0.00 | 1.776 | 3.43 | 0.00 | 1.5 | 98.5 | 0.0 | 1.44 | 0.56 | 0.80 | 3.46 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.08 | 0.00 | 1.896 | 5.72 | 0.13 | 2.2 | 97.8 | 0.0 | 0.55 | 0.57 | 0.66 | 0.87 | 3.41 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✘ | 5WVE | 6690 | 2023-04-29 | 2016-12-24 | 4.4 | 4.90 | — | 5.1 | 0.008 | 1.34 | 7.0 | 0.08 | 19.34 | 0.01 | 1.493 | 69.05 | 16.86 | 7.1 | 89.5 | 3.4 | -0.75 | 0.49 | 0.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 78605 | 9766 | 39 | 0 | 21 | 0 | 0 | logfile |
✔ | 8DEU | 27399 | 2023-04-29 | 2022-06-21 | 2.95 | 3.22 | 3.03 | 3.1 | 0.006 | 0.97 | 0.0 | 0.05 | 15.77 | 0.00 | 2.211 | 14.97 | 3.07 | 4.7 | 95.3 | 0.0 | -1.69 | 0.68 | 0.83 | 2.50 | 3.2 | 0.004 | 0.52 | 0.0 | 0.04 | 16.83 | 0.00 | 2.013 | 15.48 | 3.83 | 3.7 | 96.3 | 0.0 | 1.02 | 2.32 | 0.69 | 0.86 | 2.40 | 29088 | 3130 | 7 | 0 | 27 | 0 | 4959 | logfile |
✔ | 8D46 | 27176 | 2023-04-29 | 2022-06-01 | 2.84 | 3.04 | 2.86 | 3.1 | 0.004 | 0.77 | 0.0 | 0.05 | 17.11 | 0.01 | 2.196 | 4.90 | 2.97 | 3.4 | 96.6 | 0.0 | -0.83 | 0.60 | 0.73 | 2.51 | 3.1 | 0.004 | 0.55 | 0.0 | 0.04 | 17.51 | 0.00 | 1.911 | 8.24 | 3.34 | 4.4 | 95.6 | 0.1 | -0.34 | 0.39 | 0.61 | 0.74 | 2.49 | 30206 | 1956 | 4 | 0 | 0 | 0 | 15096 | logfile |
✘ | 7WoR | 32656 | 2023-04-29 | 2022-01-22 | 3.7 | 2.87 | — | 3.2 | 0.003 | 0.53 | 0.0 | 0.05 | 9.19 | 0.01 | 2.216 | 8.02 | 5.34 | 7.7 | 92.2 | 0.1 | -4.04 | 0.72 | 0.71 | 1.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29670 | 3799 | 9 | 0 | 23 | 0 | 0 | logfile |
✔ | 7VAM | 31850 | 2023-04-29 | 2021-08-30 | 3.2 | 2.83 | 3.11 | 3.0 | 0.003 | 0.61 | 0.0 | 0.05 | 13.32 | 0.00 | 1.634 | 3.79 | 0.00 | 1.4 | 98.6 | 0.0 | 1.25 | 0.60 | 0.80 | 3.25 | 3.0 | 0.004 | 0.58 | 0.0 | 0.04 | 16.06 | 0.00 | 1.906 | 5.54 | 0.19 | 2.5 | 97.5 | 0.0 | 0.45 | 1.37 | 0.70 | 0.88 | 3.02 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7VAQ | 31858 | 2023-04-29 | 2021-08-30 | 3.6 | 3.18 | 3.57 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 13.52 | 0.00 | 1.066 | 5.47 | 0.00 | 1.8 | 98.2 | 0.0 | 1.14 | 0.57 | 0.77 | 2.21 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 16.58 | 0.00 | 1.859 | 8.32 | 0.29 | 3.2 | 96.8 | 0.0 | 0.04 | 0.74 | 0.60 | 0.79 | 2.18 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7VAo | 31854 | 2023-04-29 | 2021-08-30 | 3.4 | 3.03 | 3.34 | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 13.49 | 0.00 | 2.144 | 4.61 | 0.00 | 2.3 | 97.7 | 0.0 | 1.13 | 0.58 | 0.80 | 2.81 | 3.1 | 0.004 | 0.59 | 0.0 | 0.04 | 16.37 | 0.00 | 1.898 | 6.43 | 0.19 | 2.8 | 97.2 | 0.0 | 0.10 | 0.67 | 0.63 | 0.84 | 2.50 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PZP | 13735 | 2023-04-29 | 2021-10-13 | 3.5 | 3.29 | — | 3.2 | 0.007 | 1.02 | 0.0 | 0.07 | 14.30 | 0.01 | 2.128 | 6.10 | 0.00 | 2.0 | 98.0 | 0.0 | 2.29 | 0.72 | 0.67 | 1.53 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.08 | 0.00 | 2.069 | 11.78 | 0.24 | 2.0 | 98.0 | 0.0 | 2.22 | 2.69 | 0.74 | 0.72 | 1.90 | 15602 | 1978 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C4J | 30285 | 2023-04-29 | 2020-05-18 | 2.89 | 3.14 | — | 3.0 | 0.008 | 0.96 | 3.0 | 0.06 | 16.23 | 0.00 | 2.196 | 10.66 | 6.35 | 5.8 | 93.4 | 0.8 | -1.63 | 0.71 | 0.73 | 2.19 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.88 | 0.00 | 2.143 | 6.58 | 3.41 | 4.6 | 95.2 | 0.2 | 1.95 | 0.64 | 0.76 | 0.85 | 1.58 | 29757 | 3627 | 12 | 0 | 33 | 0 | 0 | logfile |
✔ | 7VAP | 31857 | 2023-04-29 | 2021-08-30 | 3.0 | 2.45 | 2.98 | 2.9 | 0.004 | 0.54 | 0.0 | 0.04 | 13.36 | 0.00 | 1.645 | 3.89 | 0.00 | 2.0 | 98.0 | 0.0 | 1.43 | 0.54 | 0.79 | 3.19 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 17.12 | 0.00 | 1.931 | 5.93 | 2.50 | 2.3 | 97.7 | 0.0 | 0.60 | 0.62 | 0.63 | 0.85 | 2.90 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7U5C | 26346 | 2023-04-29 | 2022-03-02 | 4.6 | 4.72 | 4.53 | 4.6 | 0.006 | 0.87 | 1.0 | 0.05 | 15.09 | 0.01 | 1.932 | 28.65 | 0.39 | 16.4 | 83.6 | 0.1 | -5.85 | 0.77 | 0.76 | — | 4.6 | 0.003 | 0.70 | 0.0 | 0.04 | 14.59 | 0.00 | 1.915 | 15.85 | 0.00 | 8.7 | 91.3 | 0.0 | -2.43 | 0.68 | 0.77 | 0.76 | — | 30077 | 3740 | 12 | 4 | 5 | 0 | 0 | logfile |
✔ | 7K9J | 22750 | 2023-04-29 | 2020-09-29 | 3.0 | 3.59 | 3.08 | 3.5 | 0.005 | 0.84 | 1.0 | 0.06 | 13.02 | 0.01 | 2.084 | 8.81 | 0.57 | 3.8 | 96.2 | 0.0 | -0.88 | 0.73 | 0.78 | 2.65 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 14.92 | 0.00 | 2.084 | 8.26 | 1.14 | 3.9 | 96.1 | 0.0 | -0.53 | 0.46 | 0.73 | 0.80 | 2.25 | 29766 | 3627 | 54 | 0 | 111 | 0 | 0 | logfile |
✔ | 6JPU | 9871 | 2023-04-29 | 2019-03-28 | 4.27 | 5.69 | — | 6.0 | 0.007 | 1.03 | 0.0 | 0.06 | 17.27 | 0.01 | 1.984 | 70.08 | 9.58 | 9.8 | 90.1 | 0.2 | -3.97 | 0.80 | 0.76 | — | 5.2 | 0.003 | 0.67 | 0.0 | 0.04 | 13.41 | 0.00 | 1.861 | 100.50 | 0.00 | 10.5 | 89.5 | 0.0 | -1.47 | 1.12 | 0.80 | 0.78 | — | 30378 | 3462 | 6 | 0 | 0 | 0 | 2610 | logfile |
✔ | 6ZH6 | 11215 | 2023-04-29 | 2020-06-21 | 3.93 | 4.77 | 4.04 | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.44 | 0.00 | 2.170 | 12.73 | 0.00 | 8.0 | 91.9 | 0.1 | -2.74 | 0.90 | 0.83 | 1.31 | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 15.61 | 0.00 | 2.224 | 10.74 | 0.06 | 7.0 | 93.0 | 0.0 | -0.08 | 1.14 | 0.90 | 0.84 | 1.02 | 29201 | 3677 | 2 | 0 | 28 | 0 | 0 | logfile |
✔ | 7LD1 | 23279 | 2023-04-29 | 2021-01-12 | 3.4 | 4.18 | — | 3.7 | 0.013 | 1.93 | 8.0 | 0.10 | 12.95 | 0.01 | 2.514 | 0.15 | 2.35 | 9.2 | 89.2 | 1.6 | -2.22 | 0.84 | 0.79 | 2.71 | 3.7 | 0.004 | 0.70 | 0.0 | 0.04 | 13.50 | 0.00 | 2.164 | 7.49 | 0.29 | 7.6 | 92.3 | 0.0 | -0.97 | 0.56 | 0.85 | 0.83 | 2.24 | 29444 | 4249 | 27 | 0 | 67 | 0 | 0 | logfile |