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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UZ0 | 42829 | 2024-03-26 | 2023-11-14 | 2.8 | 3.08 | 2.94 | 3.1 | 0.012 | 1.89 | 40.0 | 0.11 | 15.93 | 0.02 | 1.973 | 0.23 | 3.11 | 3.7 | 96.2 | 0.1 | -1.29 | 0.69 | 0.81 | 4.01 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 16.78 | 0.00 | 1.907 | 5.03 | 1.88 | 3.1 | 96.9 | 0.0 | 0.63 | 1.55 | 0.63 | 0.80 | 3.17 | 52290 | 3348 | 18 | 0 | 18 | 0 | 25857 | logfile |
✔ | 8G6F | 29765 | 2024-03-26 | 2023-02-15 | 2.58 | 2.79 | 2.70 | 2.7 | 0.004 | 0.51 | 0.0 | 0.04 | 16.10 | 0.01 | 2.197 | 2.66 | 0.51 | 1.8 | 98.2 | 0.0 | 1.59 | 0.82 | 0.91 | 4.61 | 2.7 | 0.006 | 0.60 | 0.0 | 0.05 | 16.70 | 0.00 | 2.166 | 5.30 | 2.02 | 1.7 | 98.3 | 0.0 | 1.52 | 0.22 | 0.83 | 0.92 | 4.63 | 52394 | 6466 | 60 | 0 | 4 | 599 | 0 | logfile |
✔ | 6WDC | 21631 | 2024-03-26 | 2020-03-31 | 4.2 | 4.07 | 4.55 | 3.9 | 0.006 | 1.01 | 0.0 | 0.08 | 22.00 | 0.01 | 2.262 | 11.85 | 1.14 | 13.3 | 84.6 | 2.1 | -5.10 | 0.77 | 0.73 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.04 | 23.70 | 0.01 | 1.973 | 31.36 | 0.08 | 13.4 | 86.5 | 0.1 | -3.35 | 1.58 | 0.80 | 0.77 | — | 150149 | 6024 | 59 | 4807 | 0 | 0 | 0 | logfile |
✔ | 6WDK | 21639 | 2024-03-26 | 2020-03-31 | 3.6 | 3.94 | 3.93 | 3.8 | 0.006 | 0.95 | 0.0 | 0.08 | 21.91 | 0.01 | 1.311 | 8.08 | 0.51 | 11.0 | 87.2 | 1.8 | -4.81 | 0.82 | 0.82 | 1.17 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 23.36 | 0.01 | 2.024 | 20.66 | 6.19 | 10.1 | 89.7 | 0.2 | -2.42 | 1.52 | 0.83 | 0.83 | 1.02 | 150222 | 6025 | 60 | 4810 | 0 | 0 | 0 | logfile |
✔ | 8AGU | 15424 | 2024-03-26 | 2022-07-20 | 2.7 | 3.26 | 2.76 | 2.7 | 0.006 | 0.90 | 6.0 | 0.05 | 21.59 | 0.01 | 1.041 | 6.23 | 1.81 | 3.6 | 96.3 | 0.1 | 0.14 | 0.92 | 0.88 | 3.27 | 2.7 | 0.005 | 0.69 | 5.0 | 0.04 | 21.61 | 0.01 | 1.922 | 10.25 | 2.38 | 4.3 | 95.7 | 0.0 | 0.57 | 0.48 | 0.93 | 0.91 | 3.23 | 149748 | 9427 | 68 | 3568 | 38 | 0 | 0 | logfile |
✔ | 8Q6o | 18191 | 2024-03-26 | 2023-08-14 | 3.14 | 3.54 | 3.31 | 3.5 | 0.003 | 0.49 | 0.0 | 0.04 | 13.86 | 0.00 | 2.232 | 4.96 | 0.03 | 2.4 | 97.6 | 0.0 | 0.77 | 0.66 | 0.81 | 2.60 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 15.97 | 0.00 | 2.121 | 6.63 | 1.31 | 3.1 | 96.9 | 0.0 | 1.07 | 0.78 | 0.70 | 0.85 | 2.44 | 51983 | 6454 | 34 | 0 | 10 | 0 | 0 | logfile |
✔ | 6iXH | 9747 | 2024-03-26 | 2018-12-10 | 4.0 | 4.11 | — | 4.0 | 0.010 | 1.11 | 0.0 | 0.06 | 15.28 | 0.01 | 2.228 | 6.64 | 0.60 | 7.6 | 92.0 | 0.4 | -4.89 | 0.84 | 0.87 | — | 4.0 | 0.008 | 0.88 | 0.0 | 0.05 | 16.91 | 0.00 | 2.098 | 16.23 | 4.46 | 7.5 | 92.4 | 0.1 | -2.22 | 0.60 | 0.85 | 0.87 | — | 52280 | 6785 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UGU | 26406 | 2024-03-26 | 2022-03-25 | 2.6 | 2.77 | 2.61 | 2.8 | 0.014 | 2.09 | 33.0 | 0.10 | 14.05 | 0.02 | 2.521 | 0.04 | 0.73 | 5.0 | 94.9 | 0.1 | -2.11 | 0.64 | 0.75 | 3.42 | 2.8 | 0.004 | 0.69 | 0.0 | 0.04 | 16.85 | 0.01 | 1.823 | 4.25 | 3.85 | 5.8 | 94.2 | 0.0 | -1.07 | 1.40 | 0.61 | 0.74 | 2.45 | 52752 | 3488 | 8 | 0 | 0 | 0 | 26176 | logfile |
✔ | 7XC2 | 33112 | 2024-03-26 | 2022-03-22 | 3.0 | 3.52 | — | 2.8 | 0.007 | 0.83 | 0.0 | 0.05 | 12.95 | 0.00 | 2.093 | 8.50 | 1.80 | 7.3 | 92.7 | 0.0 | -2.27 | 0.80 | 0.71 | 2.27 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 14.58 | 0.00 | 2.202 | 6.24 | 1.13 | 5.3 | 94.7 | 0.0 | 0.38 | 2.00 | 0.93 | 0.90 | 1.89 | 52070 | 6445 | 15 | 0 | 5 | 0 | 0 | logfile |
✔ | 5MDV | 3489 | 2024-03-26 | 2016-11-13 | 2.97 | 3.05 | 2.97 | 3.0 | 0.008 | 1.26 | 22.0 | 0.10 | 23.70 | 0.02 | 1.257 | 3.21 | 7.74 | 4.9 | 94.7 | 0.4 | -1.77 | 0.79 | 0.88 | 3.19 | 3.0 | 0.004 | 0.65 | 1.0 | 0.04 | 23.11 | 0.01 | 1.752 | 9.09 | 4.16 | 3.1 | 96.9 | 0.0 | 0.38 | 0.44 | 0.82 | 0.89 | 2.95 | 149892 | 6382 | 67 | 4638 | 442 | 2 | 0 | logfile |
✔ | 8DG4 | 27407 | 2024-03-26 | 2022-06-23 | 3.12 | 3.38 | 3.17 | 3.4 | 0.013 | 1.93 | 24.0 | 0.10 | 13.65 | 0.01 | 2.537 | 0.00 | 0.15 | 3.9 | 96.0 | 0.1 | -2.10 | 0.68 | 0.80 | 3.99 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 15.23 | 0.00 | 1.888 | 2.37 | 1.30 | 4.3 | 95.7 | 0.0 | -0.93 | 0.44 | 0.64 | 0.79 | 2.72 | 52368 | 3488 | 8 | 0 | 0 | 0 | 25920 | logfile |
✔ | 7MT7 | 23976 | 2024-03-26 | 2021-05-13 | 2.71 | 2.43 | — | 2.8 | 0.007 | 0.86 | 0.0 | 0.05 | 22.81 | 0.01 | 2.026 | 2.68 | 0.17 | 6.3 | 93.6 | 0.1 | -4.19 | 0.87 | 0.87 | 3.93 | 2.8 | 0.008 | 0.71 | 0.0 | 0.04 | 22.50 | 0.01 | 1.817 | 5.71 | 2.81 | 6.4 | 93.6 | 0.1 | -0.79 | 0.44 | 0.86 | 0.88 | 3.29 | 149696 | 5629 | 71 | 4912 | 449 | 0 | 0 | logfile |
✔ | 6SGT | 10184 | 2024-03-26 | 2019-08-05 | 3.46 | 3.54 | 3.37 | 3.5 | 0.004 | 0.72 | 0.0 | 0.04 | 12.56 | 0.00 | 2.205 | 8.28 | 0.29 | 4.5 | 95.4 | 0.1 | -4.71 | 0.65 | 0.79 | 2.46 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 15.56 | 0.00 | 1.908 | 9.01 | 1.96 | 5.2 | 94.8 | 0.0 | -0.81 | 2.28 | 0.67 | 0.83 | 2.25 | 52180 | 3408 | 5 | 0 | 0 | 0 | 26299 | logfile |
✔ | 5T0G | 8334 | 2024-03-26 | 2016-08-16 | 4.4 | 4.09 | — | 4.4 | 0.005 | 0.93 | 1.0 | 0.05 | 11.89 | 0.00 | 1.763 | 18.04 | 0.10 | 7.5 | 91.7 | 0.8 | -3.88 | 0.68 | 0.56 | — | 3.9 | 0.003 | 0.89 | 0.0 | 0.05 | 13.51 | 0.01 | 2.046 | 24.60 | 0.04 | 6.8 | 92.8 | 0.4 | -1.66 | 1.28 | 0.70 | 0.68 | — | 77800 | 9924 | 39 | 0 | 7 | 0 | 0 | logfile |
✔ | 6GEN | 4396 | 2024-03-25 | 2018-04-27 | 3.6 | 4.67 | — | 4.5 | 0.004 | 0.75 | 0.0 | 0.04 | 20.64 | 0.01 | 2.109 | 5.89 | 8.77 | 3.9 | 96.0 | 0.0 | -4.51 | 0.78 | 0.58 | -0.18 | 4.5 | 0.003 | 0.76 | 0.0 | 0.04 | 21.37 | 0.00 | 0.980 | 17.58 | 2.40 | 4.9 | 95.1 | 0.0 | -0.46 | 1.30 | 0.85 | 0.74 | -0.02 | 44481 | 4683 | 29 | 346 | 151 | 0 | 0 | logfile |
✔ | 7ELN | 31186 | 2024-03-25 | 2021-04-12 | 3.0 | 3.28 | — | 3.1 | 0.007 | 0.84 | 0.0 | 0.05 | 17.90 | 0.01 | 1.940 | 6.77 | 0.58 | 5.5 | 94.4 | 0.1 | -3.03 | 0.86 | 0.84 | 2.72 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 18.44 | 0.00 | 2.132 | 9.04 | 1.69 | 5.4 | 94.6 | 0.0 | 0.26 | 1.18 | 0.87 | 0.88 | 2.63 | 48906 | 6209 | 26 | 172 | 0 | 0 | 0 | logfile |
✔ | 6Z97 | 11119 | 2024-03-25 | 2020-06-03 | 3.4 | 3.50 | — | 3.4 | 0.004 | 0.61 | 0.0 | 0.05 | 12.08 | 0.00 | 2.205 | 5.13 | 0.73 | 4.7 | 95.3 | 0.0 | -0.75 | 0.77 | 0.82 | 3.10 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 13.34 | 0.00 | 1.987 | 5.57 | 1.25 | 4.6 | 95.4 | 0.0 | -0.10 | 1.03 | 0.79 | 0.84 | 2.84 | 45362 | 2975 | 17 | 0 | 49 | 0 | 21895 | logfile |
✔ | 7KF8 | 22846 | 2024-03-25 | 2020-10-13 | 3.0 | 3.24 | — | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.44 | 0.00 | 1.527 | 5.80 | 0.04 | 4.5 | 95.5 | 0.0 | -2.34 | 0.70 | 0.79 | 1.38 | 3.2 | 0.004 | 0.76 | 0.0 | 0.04 | 17.02 | 0.00 | 1.698 | 9.38 | 1.79 | 6.3 | 93.7 | 0.0 | 0.44 | 0.85 | 0.71 | 0.83 | 2.09 | 47738 | 3055 | 5 | 0 | 2 | 0 | 24247 | logfile |
✔ | 6H3C | 0132 | 2024-03-25 | 2018-07-18 | 3.9 | 3.99 | 3.83 | 3.9 | 0.020 | 1.86 | 0.0 | 0.10 | 10.54 | 0.01 | 1.965 | 1.76 | 0.00 | 5.3 | 94.2 | 0.4 | -0.37 | 0.73 | 0.68 | 1.52 | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 14.92 | 0.00 | 1.722 | 12.93 | 2.31 | 7.4 | 92.3 | 0.3 | -0.77 | 0.99 | 0.75 | 0.71 | 1.73 | 49982 | 3146 | 14 | 0 | 2 | 2 | 24860 | logfile |
✔ | 6TCZ | 10462 | 2024-03-25 | 2019-11-07 | 3.4 | 3.48 | 3.39 | 3.4 | 0.007 | 0.80 | 0.0 | 0.05 | 15.07 | 0.00 | 2.048 | 10.92 | 0.84 | 5.9 | 94.1 | 0.0 | -3.18 | 0.77 | 0.86 | 2.81 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 17.14 | 0.00 | 2.046 | 10.13 | 3.57 | 4.7 | 95.3 | 0.0 | -0.41 | 0.53 | 0.79 | 0.88 | 2.36 | 49248 | 6362 | 30 | 0 | 2 | 0 | 0 | logfile |