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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PYT | 20526 | 2024-03-25 | 2019-07-30 | 2.9 | 2.66 | — | 2.9 | 0.009 | 1.01 | 0.0 | 0.06 | 10.88 | 0.01 | 2.212 | 4.73 | 0.94 | 9.5 | 90.5 | 0.0 | -4.57 | 0.47 | 0.79 | 3.58 | 2.9 | 0.003 | 0.66 | 0.0 | 0.04 | 17.30 | 0.00 | 2.089 | 8.44 | 6.17 | 8.2 | 91.8 | 0.0 | -1.57 | 1.66 | 0.50 | 0.82 | 3.39 | 49920 | 6624 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8R6F | 18951 | 2024-03-25 | 2023-11-22 | 2.34 | 2.53 | 2.46 | 2.5 | 0.009 | 1.00 | 0.0 | 0.04 | 22.48 | 0.02 | 1.805 | 11.86 | 0.95 | 2.7 | 97.3 | 0.0 | 0.10 | 0.79 | 0.82 | 3.93 | 2.5 | 0.006 | 0.87 | 0.0 | 0.04 | 22.55 | 0.01 | 1.681 | 10.28 | 3.29 | 2.8 | 97.2 | 0.0 | 0.32 | 0.37 | 0.80 | 0.86 | 3.92 | 49016 | 2833 | 39 | 1177 | 48 | 1067 | 0 | logfile |
✔ | 7UZK | 26914 | 2024-03-25 | 2022-05-09 | 3.0 | 3.14 | — | 3.1 | 0.012 | 1.74 | 8.0 | 0.09 | 12.77 | 0.01 | 2.272 | 0.21 | 0.30 | 2.6 | 97.2 | 0.2 | -0.44 | 0.71 | 0.81 | 3.51 | 3.1 | 0.006 | 0.69 | 0.0 | 0.05 | 16.39 | 0.00 | 2.102 | 6.37 | 2.20 | 3.2 | 96.8 | 0.0 | 0.86 | 1.68 | 0.73 | 0.83 | 2.88 | 45246 | 5702 | 20 | 0 | 2 | 0 | 0 | logfile |
✔ | 8VD8 | 43145 | 2024-03-25 | 2023-12-14 | 3.2 | 2.93 | 3.17 | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 13.73 | 0.01 | 2.181 | 0.80 | 0.00 | 1.9 | 98.1 | 0.0 | -0.87 | 0.66 | 0.83 | 3.38 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 16.85 | 0.00 | 2.133 | 5.98 | 2.97 | 2.4 | 97.6 | 0.0 | 0.53 | 0.69 | 0.65 | 0.84 | 3.00 | 47880 | 5832 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PEW | 20334 | 2024-03-25 | 2019-06-21 | 3.2 | 3.44 | — | 3.4 | 0.009 | 1.23 | 12.0 | 0.08 | 15.69 | 0.01 | 1.770 | 12.92 | 3.11 | 5.2 | 94.4 | 0.4 | -4.44 | 0.79 | 0.85 | 2.46 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 16.61 | 0.00 | 2.146 | 8.31 | 1.90 | 4.9 | 95.1 | 0.0 | -0.64 | 1.27 | 0.77 | 0.86 | 2.56 | 51348 | 6252 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YKF | 6832 | 2024-03-25 | 2017-10-14 | 4.33 | 4.45 | 4.32 | 4.3 | 0.006 | 0.81 | 4.0 | 0.05 | 14.03 | 0.01 | 2.030 | 15.30 | 8.16 | 4.4 | 95.1 | 0.4 | -2.48 | 0.78 | 0.77 | — | 4.3 | 0.005 | 0.74 | 0.0 | 0.04 | 13.10 | 0.00 | 2.146 | 15.09 | 0.00 | 4.6 | 95.3 | 0.1 | 0.40 | 3.12 | 0.80 | 0.80 | — | 50988 | 6536 | 15 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FLD | 29275 | 2024-03-25 | 2022-12-21 | 2.58 | 2.89 | 2.64 | 2.9 | 0.009 | 0.83 | 0.0 | 0.04 | 21.82 | 0.03 | 1.041 | 2.28 | 0.00 | 2.1 | 97.9 | 0.0 | -0.07 | 0.86 | 0.86 | 4.32 | 2.9 | 0.004 | 0.70 | 0.0 | 0.03 | 22.11 | 0.01 | 1.053 | 5.54 | 2.01 | 2.1 | 97.9 | 0.0 | 1.04 | 0.45 | 0.86 | 0.88 | 3.66 | 148569 | 8505 | 68 | 3718 | 93 | 0 | 0 | logfile |
✔ | 8DAQ | 27272 | 2024-03-25 | 2022-06-13 | 4.35 | 4.68 | 4.29 | 4.5 | 0.003 | 0.56 | 0.0 | 0.05 | 13.37 | 0.00 | 1.857 | 13.50 | 0.00 | 5.0 | 95.0 | 0.0 | -1.37 | 0.72 | 0.61 | — | 4.5 | 0.005 | 0.68 | 0.0 | 0.04 | 13.11 | 0.00 | 1.858 | 18.64 | 0.00 | 8.5 | 91.4 | 0.1 | -1.69 | 0.89 | 0.80 | 0.79 | — | 52100 | 3412 | 16 | 0 | 8 | 0 | 25764 | logfile |
✔ | 7RER | 24437 | 2024-03-25 | 2021-07-13 | 2.6 | 2.46 | — | 2.4 | 0.012 | 1.73 | 13.0 | 0.10 | 14.33 | 0.01 | 2.398 | 1.60 | 1.09 | 4.0 | 95.7 | 0.3 | -0.64 | 0.67 | 0.83 | 6.34 | 2.4 | 0.003 | 0.56 | 0.0 | 0.04 | 15.57 | 0.00 | 1.958 | 3.94 | 0.60 | 3.3 | 96.6 | 0.1 | 0.41 | 0.47 | 0.68 | 0.85 | 5.42 | 47737 | 3112 | 16 | 0 | 16 | 0 | 23697 | logfile |
✔ | 8CEE | 16607 | 2024-03-25 | 2023-02-01 | 3.7 | 2.86 | 3.60 | 3.0 | 0.009 | 1.55 | 15.0 | 0.11 | 23.57 | 0.02 | 1.876 | 8.95 | 3.87 | 5.9 | 93.2 | 0.9 | -3.17 | 0.47 | 0.65 | 1.30 | 2.9 | 0.005 | 0.82 | 0.0 | 0.04 | 23.50 | 0.01 | 1.990 | 18.67 | 3.15 | 5.8 | 94.0 | 0.2 | -0.85 | 1.13 | 0.49 | 0.59 | 1.20 | 51964 | 2928 | 22 | 1340 | 0 | 0 | 0 | logfile |
✔ | 6oJ6 | 20089 | 2024-03-25 | 2019-04-10 | 4.2 | 4.24 | 4.28 | 4.2 | 0.010 | 1.26 | 2.0 | 0.06 | 10.77 | 0.01 | 2.060 | 3.08 | 0.01 | 9.2 | 90.7 | 0.1 | -3.44 | 0.64 | 0.75 | — | 4.2 | 0.004 | 0.66 | 0.0 | 0.04 | 14.02 | 0.00 | 1.829 | 12.81 | 0.02 | 8.4 | 91.6 | 0.0 | -0.95 | 1.23 | 0.65 | 0.80 | — | 148661 | 9030 | 13 | 24 | 0 | 0 | 74396 | logfile |
✔ | 6YTL | 10919 | 2024-03-25 | 2020-04-24 | 3.82 | 3.67 | 3.70 | 3.7 | 0.005 | 0.76 | 0.0 | 0.05 | 13.89 | 0.01 | 1.929 | 9.85 | 0.00 | 3.4 | 96.6 | 0.0 | -0.15 | 0.66 | 0.82 | 1.92 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 15.62 | 0.00 | 2.251 | 7.88 | 2.58 | 1.6 | 98.4 | 0.0 | 3.21 | 0.57 | 0.69 | 0.83 | 1.67 | 45782 | 5874 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8T0M | 40944 | 2024-03-25 | 2023-06-01 | 2.4 | 2.53 | 2.44 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.14 | 0.00 | 2.184 | 5.34 | 1.17 | 1.4 | 98.6 | 0.0 | 1.20 | 0.77 | 0.86 | 4.07 | 2.5 | 0.006 | 0.67 | 0.0 | 0.05 | 16.93 | 0.01 | 2.146 | 7.50 | 2.52 | 1.7 | 98.3 | 0.0 | 1.22 | 1.53 | 0.75 | 0.85 | 4.00 | 47538 | 6102 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QM7 | 4590 | 2024-03-25 | 2019-02-01 | 2.8 | 2.94 | — | 2.9 | 0.012 | 1.87 | 9.0 | 0.10 | 18.62 | 0.01 | 2.155 | 5.34 | 11.11 | 3.9 | 95.7 | 0.3 | -2.65 | 0.80 | 0.90 | 3.81 | 2.9 | 0.005 | 0.61 | 0.0 | 0.04 | 18.06 | 0.00 | 2.104 | 9.96 | 3.42 | 2.0 | 98.0 | 0.1 | 1.06 | 1.60 | 0.77 | 0.88 | 3.58 | 49518 | 6350 | 58 | 0 | 2 | 334 | 0 | logfile |
✘ | 5H64 | 6668 | 2024-03-25 | 2016-11-10 | 4.4 | 3.65 | — | 3.4 | 0.011 | 1.57 | 0.0 | 0.07 | 11.97 | 0.01 | 1.144 | 72.33 | 0.80 | 17.3 | 80.2 | 2.4 | -5.94 | 0.74 | 0.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45252 | 6430 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PEV | 20333 | 2024-03-25 | 2019-06-21 | 3.2 | 3.28 | — | 3.3 | 0.008 | 0.99 | 0.0 | 0.06 | 16.57 | 0.01 | 2.103 | 6.83 | 1.84 | 4.9 | 94.9 | 0.2 | -4.14 | 0.78 | 0.83 | 3.46 | 3.2 | 0.004 | 0.66 | 0.0 | 0.05 | 17.11 | 0.00 | 1.917 | 12.77 | 2.15 | 4.1 | 95.9 | 0.0 | -0.56 | 0.60 | 0.76 | 0.86 | 3.48 | 46368 | 5736 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 8SR1 | 40717 | 2024-03-25 | 2023-05-05 | 2.18 | 2.37 | 2.20 | 2.3 | 0.009 | 1.11 | 0.0 | 0.05 | 22.92 | 0.01 | 1.795 | 20.32 | 3.93 | 6.0 | 93.5 | 0.5 | 0.61 | 0.68 | 0.66 | 2.68 | 2.3 | 0.004 | 0.72 | 0.0 | 0.05 | 20.15 | 0.00 | 1.950 | 15.50 | 2.19 | 5.0 | 94.8 | 0.3 | 0.58 | 0.66 | 0.78 | 0.78 | 2.63 | 22854 | 2577 | 27 | 0 | 66 | 351 | 0 | logfile |
✔ | 8SZZ | 40926 | 2024-03-25 | 2023-05-30 | 2.9 | 3.06 | 2.89 | 3.0 | 0.005 | 0.71 | 0.0 | 0.05 | 14.17 | 0.01 | 2.197 | 3.30 | 0.43 | 1.5 | 98.5 | 0.0 | -1.08 | 0.72 | 0.85 | 3.42 | 3.0 | 0.003 | 0.49 | 0.0 | 0.04 | 17.39 | 0.00 | 2.140 | 4.34 | 1.47 | 1.8 | 98.2 | 0.0 | 2.48 | 0.48 | 0.74 | 0.87 | 3.00 | 48815 | 6504 | 72 | 0 | 24 | 0 | 0 | logfile |
✔ | 7M4Q | 23664 | 2024-03-25 | 2021-03-22 | 2.87 | 2.54 | — | 2.6 | 0.011 | 1.08 | 3.0 | 0.06 | 15.29 | 0.01 | 2.198 | 5.41 | 2.63 | 2.4 | 97.5 | 0.1 | 0.60 | 0.54 | 0.72 | 3.10 | 2.6 | 0.004 | 0.58 | 0.0 | 0.04 | 17.10 | 0.00 | 1.922 | 5.93 | 3.32 | 2.4 | 97.6 | 0.0 | 1.30 | 0.60 | 0.66 | 0.79 | 2.97 | 48572 | 3142 | 5 | 0 | 8 | 0 | 24342 | logfile |
✘ | 8GZH | 34398 | 2024-03-25 | 2022-09-27 | 2.96 | 2.59 | 2.95 | 2.8 | 0.004 | 0.77 | 0.0 | 0.05 | 16.76 | 0.01 | 1.845 | 3.46 | 0.14 | 4.6 | 95.4 | 0.0 | -3.25 | 0.73 | 0.77 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30339 | 3693 | 13 | 104 | 5 | 0 | 0 | logfile |