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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7VZG | 32228 | 2023-04-26 | 2021-11-16 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22458 | 2402 | 25 | 0 | 119 | 6 | 0 | logfile |
✔ | 7N64 | 24193 | 2023-04-20 | 2021-06-07 | 4.2 | 3.94 | — | 3.9 | 0.009 | 1.06 | 0.0 | 0.06 | 15.21 | 0.01 | 2.157 | 36.86 | 1.78 | 20.8 | 78.9 | 0.3 | -3.80 | 0.65 | 0.71 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.05 | 13.92 | 0.01 | 2.089 | 23.18 | 0.13 | 14.5 | 85.5 | 0.0 | -2.77 | 0.52 | 0.64 | 0.69 | — | 7189 | 906 | 7 | 0 | 7 | 0 | 0 | logfile |
✔ | 7P5J | 13200 | 2023-04-20 | 2021-07-14 | 4.0 | 3.72 | 3.98 | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 15.50 | 0.01 | 2.264 | 8.81 | 0.60 | 2.5 | 97.5 | 0.0 | 2.65 | 0.51 | 0.76 | — | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 17.82 | 0.00 | 2.172 | 11.51 | 0.45 | 1.8 | 98.2 | 0.0 | 3.11 | 0.48 | 0.53 | 0.77 | — | 6250 | 798 | 6 | 0 | 8 | 0 | 0 | logfile |
✘ | 7VZR | 32229 | 2023-04-25 | 2021-11-16 | 2.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21354 | 2266 | 22 | 0 | 117 | 6 | 0 | logfile |
✔ | 6DMo | 7964 | 2023-04-20 | 2018-06-05 | 4.1 | 4.16 | — | 4.1 | 0.008 | 1.27 | 0.0 | 0.06 | 13.73 | 0.01 | 1.764 | 8.90 | 2.78 | 11.1 | 88.6 | 0.3 | -4.11 | 0.55 | 0.64 | — | 4.1 | 0.003 | 0.83 | 0.0 | 0.05 | 13.68 | 0.00 | 2.175 | 14.88 | 0.00 | 9.1 | 90.9 | 0.0 | -0.52 | 2.16 | 0.58 | 0.71 | — | 7853 | 982 | 3 | 0 | 7 | 0 | 0 | logfile |
✘ | 7NKZ | 12451 | 2023-04-20 | 2021-02-19 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6424 | 792 | 4 | 0 | 5 | 42 | 0 | logfile |
✔ | 7BZW | 30261 | 2023-04-21 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.003 | 0.82 | 0.0 | 0.05 | 14.68 | 0.01 | 1.922 | 20.13 | 0.00 | 19.3 | 80.7 | 0.0 | -2.79 | 1.80 | 0.93 | 0.86 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GH6 | 0002 | 2023-04-28 | 2018-05-04 | 4.1 | 4.20 | — | 3.9 | 0.004 | 0.91 | 0.0 | 0.05 | 14.40 | 0.00 | 1.934 | 15.53 | 0.38 | 9.7 | 89.3 | 0.9 | -3.61 | 0.85 | 0.74 | — | 3.9 | 0.005 | 0.81 | 0.0 | 0.04 | 15.96 | 0.00 | 1.965 | 12.53 | 0.11 | 9.9 | 89.5 | 0.6 | -1.09 | 1.78 | 0.87 | 0.81 | — | 28051 | 3482 | 8 | 96 | 51 | 0 | 0 | logfile |
✔ | 6B19 | 7031 | 2023-04-20 | 2017-09-18 | 4.5 | 4.61 | — | 4.4 | 0.023 | 1.38 | 0.0 | 0.05 | 6.45 | 0.01 | 2.201 | 16.18 | 0.00 | 19.4 | 80.5 | 0.1 | -5.73 | 0.74 | 0.63 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.04 | 12.73 | 0.00 | 1.937 | 28.68 | 0.00 | 25.4 | 74.6 | 0.0 | -4.85 | 1.32 | 0.78 | 0.68 | — | 5699 | 907 | 4 | 38 | 0 | 0 | 409 | logfile |
✘ | 7N62 | 24192 | 2023-04-20 | 2021-06-07 | 4.0 | 3.42 | — | 3.9 | 0.006 | 0.82 | 0.0 | 0.05 | 13.98 | 0.01 | 2.203 | 21.20 | 0.00 | 14.9 | 85.1 | 0.0 | -2.74 | 0.73 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5613 | 712 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7W6M | 32329 | 2023-04-29 | 2021-12-02 | 4.7 | 4.96 | 4.72 | 4.7 | 0.005 | 0.83 | 0.0 | 0.06 | 13.62 | 0.00 | 2.107 | 9.16 | 0.00 | 4.4 | 95.6 | 0.0 | -0.63 | 0.85 | 0.80 | — | 4.7 | 0.004 | 0.74 | 0.0 | 0.05 | 13.62 | 0.00 | 2.036 | 13.13 | 0.00 | 6.2 | 93.8 | 0.0 | -0.91 | 0.37 | 0.85 | 0.82 | — | 30756 | 3672 | 51 | 0 | 204 | 0 | 0 | logfile |
✔ | 6V8P | 21108 | 2023-04-23 | 2019-12-11 | 4.1 | 4.54 | — | 4.2 | 0.005 | 0.76 | 0.0 | 0.81 | 11.30 | 0.00 | 2.210 | 3.96 | 0.29 | 6.7 | 93.2 | 0.0 | -2.58 | 0.82 | 0.79 | — | 4.2 | 0.009 | 1.50 | 0.0 | 0.26 | 11.97 | 0.01 | 2.061 | 12.84 | 0.00 | 10.4 | 89.6 | 0.0 | -0.79 | 1.64 | 0.85 | 0.84 | — | 14548 | 2117 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PVM | 20493 | 2023-04-25 | 2019-07-21 | 4.5 | 4.24 | — | 4.3 | 0.006 | 1.18 | 0.0 | 0.06 | 12.60 | 0.01 | 2.154 | 6.75 | 0.87 | 15.6 | 84.1 | 0.3 | -6.13 | 0.49 | 0.74 | — | 4.3 | 0.003 | 0.88 | 0.0 | 0.04 | 13.70 | 0.00 | 2.121 | 13.51 | 0.00 | 13.6 | 86.1 | 0.3 | -2.67 | 1.03 | 0.49 | 0.74 | — | 21006 | 2576 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7oTi | 13060 | 2023-04-21 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.86 | 0.0 | 0.04 | 14.40 | 0.00 | 2.119 | 20.52 | 0.00 | 7.2 | 92.3 | 0.5 | -1.27 | 1.77 | 0.52 | 0.51 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7F73 | 31484 | 2023-04-20 | 2021-06-27 | 4.0 | 4.29 | 3.95 | 4.3 | 0.007 | 1.07 | 0.0 | 0.06 | 15.26 | 0.00 | 2.247 | 11.96 | 4.10 | 3.1 | 96.9 | 0.0 | 0.17 | 0.57 | 0.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4934 | 586 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ML1 | 23905 | 2023-04-22 | 2021-04-27 | 4.0 | 4.59 | — | 2.6 | 0.005 | 0.66 | 0.0 | 0.04 | 16.62 | 0.00 | 1.767 | 25.40 | 12.14 | 8.8 | 91.1 | 0.1 | -1.89 | 0.65 | 0.57 | — | 2.8 | 0.003 | 0.67 | 0.0 | 0.04 | 16.63 | 0.00 | 2.014 | 19.24 | 0.31 | 7.6 | 92.4 | 0.1 | -0.93 | 0.64 | 0.84 | 0.79 | — | 64538 | 8076 | 43 | 114 | 142 | 0 | 0 | logfile |
✘ | 7VZB | 32224 | 2023-04-21 | 2021-11-15 | 3.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9524 | 1170 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6ZY7 | 11553 | 2023-04-25 | 2020-07-30 | 4.64 | 8.26 | 4.84 | 4.6 | 0.009 | 1.01 | 0.0 | 0.08 | 12.28 | 0.01 | 2.218 | 6.54 | 0.00 | 1.7 | 98.3 | 0.0 | -1.71 | 0.93 | 0.83 | — | 4.6 | 0.002 | 0.57 | 0.0 | 0.04 | 13.75 | 0.00 | 2.166 | 14.32 | 0.00 | 2.3 | 97.7 | 0.0 | -0.31 | 2.28 | 0.92 | 0.71 | — | 19979 | 2319 | 10 | 60 | 4 | 0 | 0 | logfile |
✔ | 6UGF | 20763 | 2023-04-23 | 2019-09-26 | 4.2 | 4.51 | — | 4.2 | 0.008 | 1.11 | 0.0 | 0.05 | 13.93 | 0.01 | 2.046 | 4.71 | 0.30 | 6.0 | 93.9 | 0.1 | -4.55 | 0.80 | 0.72 | — | 4.3 | 0.003 | 0.61 | 0.0 | 0.04 | 13.25 | 0.00 | 1.877 | 8.62 | 0.00 | 4.7 | 95.3 | 0.0 | -0.44 | 0.62 | 0.84 | 0.82 | — | 13874 | 1862 | 12 | 0 | 9 | 0 | 0 | logfile |
✘ | 6XZD | 10659 | 2023-04-22 | 2020-02-04 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |