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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ENJ | 31211 | 2022-12-12 | 2021-04-17 | 4.4 | 4.62 | — | 4.0 | 0.011 | 1.18 | 16.0 | 0.07 | 15.29 | 0.01 | 2.211 | 7.87 | 1.23 | 5.7 | 93.7 | 0.6 | -2.67 | 0.75 | 0.49 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.09 | 0.00 | 2.106 | 12.63 | 0.02 | 5.0 | 94.9 | 0.1 | 1.41 | 0.72 | 0.81 | 0.66 | — | 57971 | 7340 | 27 | 0 | 21 | 0 | 0 | logfile |
✔ | 7M2Y | 23637 | 2022-12-14 | 2021-03-17 | 4.03 | 4.58 | 3.93 | 4.4 | 0.022 | 1.80 | 0.0 | 0.11 | 10.99 | 0.01 | 1.961 | 4.31 | 0.05 | 2.2 | 97.6 | 0.3 | 0.03 | 0.52 | 0.71 | — | 4.4 | 0.004 | 0.76 | 0.0 | 0.04 | 13.21 | 0.00 | 2.167 | 20.49 | 0.10 | 5.6 | 94.2 | 0.2 | -0.32 | 1.80 | 0.52 | 0.76 | — | 18560 | 2278 | 7 | 2 | 0 | 0 | 0 | logfile |
✔ | 7BK0 | 12195 | 2022-12-19 | 2021-01-14 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57536 | 7411 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JQQ | 22441 | 2022-12-16 | 2020-08-11 | 4.1 | 4.43 | — | 4.3 | 0.004 | 0.88 | 0.0 | 0.04 | 23.12 | 0.01 | 1.379 | 26.31 | 0.00 | 9.7 | 90.3 | 0.0 | -2.31 | 0.35 | 0.57 | — | 4.3 | 0.005 | 0.92 | 0.0 | 0.05 | 23.22 | 0.01 | 1.853 | 31.60 | 0.00 | 12.8 | 87.1 | 0.1 | -2.68 | 0.50 | 0.35 | 0.60 | — | 28416 | 1635 | 15 | 705 | 6 | 0 | 0 | logfile |
✔ | 7AKD | 11812 | 2022-12-15 | 2020-09-30 | 4.0 | 3.98 | — | 4.0 | 0.003 | 0.64 | 0.0 | 0.05 | 13.02 | 0.00 | 2.126 | 2.92 | 0.21 | 2.7 | 97.3 | 0.0 | -1.66 | 0.74 | 0.77 | — | 4.0 | 0.004 | 0.66 | 0.0 | 0.05 | 14.69 | 0.00 | 2.122 | 5.85 | 0.31 | 4.3 | 95.7 | 0.0 | -0.37 | 1.24 | 0.75 | 0.79 | — | 27358 | 3404 | 29 | 0 | 79 | 0 | 0 | logfile |
✔ | 7NVW | 12615 | 2022-12-15 | 2021-03-16 | 4.3 | 4.32 | 4.26 | 4.2 | 0.002 | 0.45 | 0.0 | 0.04 | 15.45 | 0.00 | 1.971 | 7.13 | 0.00 | 4.4 | 95.6 | 0.0 | 0.80 | 0.71 | 0.66 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 15.78 | 0.00 | 2.097 | 18.82 | 0.04 | 5.6 | 94.4 | 0.0 | -0.62 | 1.05 | 0.73 | 0.69 | — | 23647 | 2814 | 17 | 42 | 35 | 0 | 0 | logfile |
✔ | 7NVR | 12610 | 2022-12-17 | 2021-03-15 | 4.5 | 4.38 | 4.40 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 15.01 | 0.00 | 1.807 | 8.82 | 0.01 | 3.9 | 96.0 | 0.0 | 0.72 | 0.75 | 0.57 | — | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 15.27 | 0.00 | 1.962 | 14.53 | 0.01 | 4.2 | 95.8 | 0.0 | 0.44 | 1.67 | 0.73 | 0.54 | — | 96126 | 11548 | 71 | 128 | 157 | 0 | 0 | logfile |
✔ | 6ZY6 | 11551 | 2022-12-13 | 2020-07-30 | 4.1 | 4.75 | 4.09 | 4.6 | 0.010 | 1.07 | 2.0 | 0.08 | 13.11 | 0.01 | 2.304 | 5.56 | 0.00 | 1.6 | 98.4 | 0.0 | -0.70 | 0.83 | 0.77 | — | 4.6 | 0.002 | 0.61 | 0.0 | 0.04 | 16.29 | 0.00 | 2.145 | 9.75 | 0.00 | 3.4 | 96.6 | 0.0 | 0.20 | 1.90 | 0.86 | 0.81 | — | 13504 | 1520 | 8 | 60 | 2 | 0 | 0 | logfile |
✔ | 6ZY7 | 11553 | 2022-12-14 | 2020-07-30 | 4.64 | 8.26 | 4.84 | 4.6 | 0.009 | 1.01 | 0.0 | 0.08 | 12.28 | 0.01 | 2.218 | 6.62 | 0.00 | 1.7 | 98.3 | 0.0 | -1.71 | 0.93 | 0.83 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.04 | 13.94 | 0.00 | 2.117 | 20.08 | 0.00 | 3.1 | 96.9 | 0.0 | -0.62 | 2.30 | 0.94 | 0.82 | — | 19979 | 2319 | 10 | 60 | 4 | 0 | 0 | logfile |
✔ | 7BiN | 12192 | 2022-12-19 | 2021-01-12 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 81721 | 10887 | 56 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZGD | 11202 | 2022-12-12 | 2020-06-18 | 4.1 | 4.30 | 3.99 | 4.2 | 0.006 | 0.62 | 0.0 | 0.05 | 10.93 | 0.01 | 2.137 | 10.94 | 0.61 | 4.6 | 95.4 | 0.0 | -1.11 | 0.74 | 0.82 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.05 | 11.97 | 0.00 | 2.182 | 9.05 | 0.12 | 2.4 | 97.6 | 0.0 | -0.46 | 1.00 | 0.71 | 0.81 | — | 10175 | 1440 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EGA | 31110 | 2022-12-16 | 2021-03-24 | 4.1 | 4.55 | — | 4.1 | 0.008 | 1.08 | 35.0 | 0.07 | 16.87 | 0.01 | 1.445 | 18.80 | 3.89 | 6.5 | 93.1 | 0.4 | -3.75 | 0.60 | 0.28 | — | 3.9 | 0.004 | 0.71 | 0.0 | 0.04 | 15.57 | 0.00 | 1.930 | 15.63 | 0.00 | 5.4 | 94.5 | 0.1 | -0.50 | 1.39 | 0.75 | 0.55 | — | 85697 | 10273 | 49 | 170 | 11 | 0 | 0 | logfile |
✔ | 7EDX | 31075 | 2022-12-15 | 2021-03-17 | 4.5 | 4.87 | — | 4.1 | 0.008 | 1.09 | 34.0 | 0.07 | 16.62 | 0.01 | 1.497 | 21.08 | 3.31 | 6.1 | 93.4 | 0.5 | -3.70 | 0.67 | 0.35 | — | 3.7 | 0.005 | 0.77 | 0.0 | 0.04 | 15.45 | 0.00 | 1.970 | 18.29 | 0.00 | 6.2 | 93.7 | 0.1 | -0.63 | 0.97 | 0.78 | 0.59 | — | 81790 | 9837 | 46 | 154 | 10 | 0 | 0 | logfile |
✔ | 7LJF | 23392 | 2022-12-13 | 2021-01-29 | 4.0 | 4.34 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 13.74 | 0.00 | 1.987 | 14.43 | 0.41 | 3.4 | 96.6 | 0.0 | 0.00 | 0.83 | 0.80 | — | 4.2 | 0.006 | 0.77 | 0.0 | 0.05 | 15.72 | 0.00 | 1.752 | 24.09 | 0.41 | 6.1 | 93.9 | 0.0 | -0.76 | 0.36 | 0.83 | 0.82 | — | 15742 | 2007 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7BL6 | 12219 | 2022-12-16 | 2021-01-18 | 4.0 | 7.11 | — | 4.0 | 0.002 | 0.42 | 0.0 | 0.03 | 13.17 | 0.00 | 2.117 | 11.03 | 0.07 | 4.7 | 95.3 | 0.1 | -0.28 | 0.92 | 0.83 | — | 4.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.05 | 0.00 | 1.923 | 37.80 | 0.31 | 8.5 | 91.4 | 0.1 | -1.66 | 3.13 | 0.94 | 0.82 | — | 92769 | 3600 | 42 | 3016 | 5 | 27 | 0 | logfile |
✔ | 7LV9 | 23530 | 2022-12-11 | 2021-02-24 | 4.5 | 7.82 | 4.59 | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 27.26 | 0.00 | 1.334 | 3.02 | 0.00 | 3.2 | 96.8 | 0.0 | -3.35 | 0.82 | 0.66 | — | 4.4 | 0.005 | 0.68 | 0.0 | 0.04 | 29.24 | 0.00 | 2.127 | 22.13 | 0.00 | 3.3 | 96.7 | 0.0 | 1.18 | 1.55 | 0.90 | 0.85 | — | 8238 | 581 | 8 | 190 | 0 | 0 | 0 | logfile |
✔ | 7M2W | 23635 | 2022-12-20 | 2021-03-17 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39366 | 4827 | 16 | 0 | 4 | 0 | 0 | logfile |
✘ | 7BL2 | 12215 | 2022-12-19 | 2021-01-18 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 7NBX | 12262 | 2022-12-14 | 2021-01-28 | 4.8 | 5.30 | 4.72 | 4.9 | 0.008 | 1.04 | 0.0 | 0.05 | 15.90 | 0.01 | 1.950 | 12.59 | 0.00 | 12.3 | 87.6 | 0.1 | -4.49 | 0.76 | 0.82 | — | 4.9 | 0.005 | 0.69 | 0.0 | 0.04 | 14.27 | 0.00 | 1.835 | 16.83 | 0.00 | 12.7 | 87.3 | 0.0 | -2.53 | 0.70 | 0.76 | 0.81 | — | 22637 | 1475 | 5 | 0 | 0 | 0 | 11129 | logfile |
✔ | 7BNQ | 12232 | 2022-12-12 | 2021-01-22 | 4.1 | 4.35 | 4.09 | 4.2 | 0.005 | 0.80 | 0.0 | 0.05 | 14.89 | 0.01 | 2.293 | 4.99 | 0.32 | 5.4 | 94.6 | 0.0 | -3.83 | 0.78 | 0.86 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.04 | 14.26 | 0.00 | 2.213 | 9.59 | 0.00 | 5.4 | 94.6 | 0.0 | -1.42 | 1.21 | 0.78 | 0.85 | — | 11617 | 1488 | 5 | 0 | 0 | 0 | 0 | logfile |