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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WD5 | 21624 | 2024-03-01 | 2020-03-31 | 3.6 | 3.95 | 3.98 | 3.8 | 0.006 | 0.94 | 0.0 | 0.08 | 22.09 | 0.01 | 1.312 | 11.60 | 0.77 | 11.6 | 86.5 | 2.0 | -4.87 | 0.83 | 0.83 | 1.21 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 23.38 | 0.00 | 2.034 | 21.44 | 6.80 | 10.9 | 89.0 | 0.2 | -2.50 | 0.66 | 0.84 | 0.84 | 0.86 | 153135 | 6400 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD6 | 21625 | 2024-03-01 | 2020-03-31 | 3.7 | 4.07 | 4.15 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.03 | 0.01 | 1.316 | 11.51 | 0.71 | 11.1 | 87.3 | 1.6 | -4.98 | 0.83 | 0.82 | 0.92 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 23.46 | 0.01 | 2.049 | 24.55 | 6.10 | 10.4 | 89.4 | 0.2 | -2.60 | 1.49 | 0.84 | 0.83 | 0.78 | 153103 | 6396 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 7R7A | 24296 | 2024-03-02 | 2021-06-24 | 3.04 | 3.00 | 2.99 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 20.68 | 0.00 | 2.090 | 6.74 | 0.12 | 4.0 | 96.0 | 0.0 | -0.78 | 0.70 | 0.80 | 3.15 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 21.05 | 0.00 | 2.113 | 7.58 | 2.03 | 4.4 | 95.6 | 0.0 | 0.24 | 0.33 | 0.72 | 0.84 | 2.75 | 153087 | 11623 | 59 | 2816 | 2 | 0 | 0 | logfile |
✔ | 6WD4 | 21623 | 2024-03-01 | 2020-03-31 | 3.7 | 4.02 | 4.02 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.02 | 0.01 | 1.313 | 10.87 | 0.48 | 11.3 | 87.0 | 1.7 | -4.79 | 0.83 | 0.83 | 0.81 | 3.8 | 0.005 | 0.75 | 0.0 | 0.04 | 23.32 | 0.01 | 2.016 | 24.13 | 6.56 | 11.6 | 88.3 | 0.2 | -2.51 | 0.65 | 0.84 | 0.84 | 0.75 | 153083 | 6391 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 8V9J | 43074 | 2024-03-01 | 2023-12-08 | 3.1 | 3.49 | 3.07 | 3.3 | 0.004 | 0.56 | 0.0 | 0.04 | 22.95 | 0.01 | 2.090 | 5.54 | 0.00 | 4.4 | 95.6 | 0.0 | -0.82 | 0.89 | 0.90 | 3.08 | 3.3 | 0.007 | 0.65 | 0.0 | 0.04 | 22.83 | 0.01 | 2.055 | 6.87 | 2.49 | 4.9 | 95.1 | 0.0 | 0.15 | 0.93 | 0.88 | 0.92 | 2.64 | 153055 | 6551 | 61 | 4779 | 2 | 0 | 0 | logfile |
✔ | 7SSD | 25407 | 2024-03-01 | 2021-11-10 | 3.3 | 3.46 | 3.72 | 3.4 | 0.007 | 0.90 | 0.0 | 0.07 | 22.65 | 0.01 | 1.912 | 9.64 | 1.08 | 11.6 | 87.7 | 0.7 | -5.26 | 0.75 | 0.75 | 1.20 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 23.32 | 0.00 | 2.063 | 15.83 | 3.28 | 10.8 | 89.0 | 0.1 | -2.95 | 0.55 | 0.76 | 0.77 | 0.70 | 153049 | 6597 | 59 | 4733 | 0 | 0 | 0 | logfile |
✔ | 5iMQ | 6584 | 2024-03-01 | 2016-03-06 | 3.8 | 3.95 | — | 3.9 | 0.012 | 1.41 | 0.0 | 0.07 | 26.36 | 0.01 | 1.006 | 63.05 | 4.55 | 16.6 | 72.8 | 10.6 | -4.61 | 0.71 | 0.65 | 0.92 | 3.9 | 0.006 | 0.92 | 2.0 | 0.05 | 25.31 | 0.01 | 1.725 | 25.39 | 7.38 | 18.5 | 79.1 | 2.4 | -3.66 | 0.78 | 0.82 | 0.80 | 0.46 | 153046 | 6640 | 56 | 4680 | 1 | 0 | 0 | logfile |
✔ | 5LZC | 4123 | 2024-03-01 | 2016-09-29 | 4.8 | 5.11 | 5.25 | 4.8 | 0.009 | 1.21 | 10.0 | 0.08 | 22.13 | 0.02 | 1.994 | 5.27 | 0.11 | 5.7 | 92.4 | 1.8 | -1.87 | 0.82 | 0.82 | — | 4.8 | 0.004 | 0.74 | 0.0 | 0.04 | 23.06 | 0.01 | 1.922 | 29.21 | 0.02 | 8.3 | 91.4 | 0.3 | -2.11 | 1.86 | 0.83 | 0.83 | — | 152981 | 6432 | 64 | 4785 | 5 | 2 | 0 | logfile |
✔ | 6WDA | 21629 | 2024-03-01 | 2020-03-31 | 3.8 | 4.14 | 4.11 | 3.9 | 0.006 | 0.93 | 0.0 | 0.08 | 22.01 | 0.01 | 1.314 | 10.79 | 0.69 | 10.6 | 87.8 | 1.6 | -4.79 | 0.84 | 0.82 | 0.86 | 3.9 | 0.005 | 0.74 | 0.0 | 0.04 | 23.49 | 0.01 | 2.007 | 25.67 | 6.64 | 10.7 | 89.2 | 0.1 | -2.40 | 0.71 | 0.86 | 0.83 | 0.58 | 152933 | 6373 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 6WD9 | 21628 | 2024-03-01 | 2020-03-31 | 3.7 | 4.05 | 4.07 | 3.9 | 0.006 | 0.94 | 0.0 | 0.08 | 22.07 | 0.01 | 1.313 | 11.26 | 0.54 | 10.7 | 87.6 | 1.7 | -4.88 | 0.83 | 0.82 | 1.03 | 3.9 | 0.006 | 0.78 | 0.0 | 0.04 | 23.53 | 0.01 | 1.976 | 26.89 | 6.96 | 11.6 | 88.2 | 0.2 | -2.51 | 0.70 | 0.85 | 0.83 | 0.69 | 152927 | 6371 | 62 | 4811 | 0 | 0 | 0 | logfile |
✔ | 8FR8 | 29397 | 2024-03-01 | 2023-01-06 | 2.76 | 3.17 | 2.71 | 2.8 | 0.011 | 0.89 | 4.0 | 0.06 | 24.00 | 0.01 | 1.674 | 4.95 | 0.23 | 7.5 | 92.5 | 0.1 | -2.90 | 0.87 | 0.88 | 4.15 | 2.8 | 0.006 | 0.66 | 3.0 | 0.04 | 23.94 | 0.01 | 1.370 | 12.70 | 2.54 | 6.3 | 93.7 | 0.0 | -0.38 | 1.25 | 0.88 | 0.92 | 3.79 | 152820 | 6298 | 58 | 4843 | 0 | 0 | 0 | logfile |
✔ | 5U9F | 8521 | 2024-03-01 | 2016-12-16 | 3.2 | 4.48 | — | 3.3 | 0.006 | 0.95 | 0.0 | 0.08 | 22.02 | 0.01 | 2.301 | 12.61 | 1.02 | 10.8 | 88.2 | 1.0 | -5.04 | 0.87 | 0.78 | 1.55 | 3.4 | 0.006 | 0.75 | 1.0 | 0.04 | 23.26 | 0.01 | 1.802 | 25.76 | 4.19 | 11.0 | 88.9 | 0.1 | -2.22 | 1.46 | 0.94 | 0.90 | 1.09 | 152819 | 6576 | 72 | 4729 | 361 | 0 | 0 | logfile |
✘ | 8iNK | 35599 | 2024-03-28 | 2023-03-10 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 152807 | 8896 | 54 | 3766 | 2 | 0 | 0 | logfile |
✔ | 8PVL | 17970 | 2024-03-01 | 2023-07-17 | 2.19 | 2.40 | — | 2.2 | 0.005 | 0.81 | 0.0 | 0.04 | 21.84 | 0.01 | 2.092 | 2.93 | 1.09 | 1.5 | 98.5 | 0.0 | 0.66 | 0.90 | 0.90 | 4.54 | 2.2 | 0.005 | 0.72 | 0.0 | 0.04 | 21.70 | 0.01 | 1.867 | 4.57 | 1.67 | 1.5 | 98.5 | 0.0 | 1.52 | 0.19 | 0.91 | 0.91 | 4.44 | 152760 | 10162 | 67 | 3356 | 10 | 3 | 0 | logfile |
✔ | 7PJW | 13462 | 2024-03-28 | 2021-08-24 | 4.0 | 4.18 | 3.62 | 4.0 | 0.007 | 0.94 | 3.0 | 0.05 | 24.06 | 0.02 | 1.344 | 23.05 | 0.46 | 13.5 | 86.3 | 0.2 | -4.51 | 0.71 | 0.76 | — | 4.0 | 0.005 | 0.76 | 1.0 | 0.04 | 23.76 | 0.01 | 1.917 | 20.32 | 4.78 | 9.9 | 90.1 | 0.0 | -2.04 | 1.78 | 0.73 | 0.79 | — | 152719 | 6657 | 61 | 4728 | 2 | 0 | 0 | logfile |
✔ | 5U9G | 8522 | 2024-03-01 | 2016-12-16 | 3.2 | 4.54 | — | 3.3 | 0.006 | 0.92 | 0.0 | 0.08 | 21.99 | 0.01 | 2.111 | 12.37 | 0.93 | 10.6 | 88.5 | 1.0 | -5.08 | 0.89 | 0.79 | 1.20 | 3.4 | 0.005 | 0.69 | 0.0 | 0.03 | 23.04 | 0.00 | 1.809 | 21.51 | 3.09 | 9.4 | 90.4 | 0.2 | -1.67 | 1.89 | 0.95 | 0.91 | 1.11 | 152649 | 6561 | 70 | 4729 | 349 | 0 | 0 | logfile |
✔ | 8PHJ | 17667 | 2024-03-01 | 2023-06-20 | 3.67 | 3.12 | — | 3.1 | 0.007 | 0.56 | 0.0 | 0.03 | 21.88 | 0.02 | 1.602 | 3.56 | 2.16 | 3.4 | 96.6 | 0.0 | -0.44 | 0.76 | 0.81 | 3.82 | 3.1 | 0.008 | 0.74 | 0.0 | 0.04 | 22.11 | 0.01 | 1.781 | 5.32 | 3.81 | 4.0 | 96.0 | 0.0 | 0.33 | 0.39 | 0.76 | 0.80 | 3.17 | 152518 | 6749 | 68 | 4644 | 244 | 0 | 0 | logfile |
✘ | 5MMM | 3533 | 2024-03-28 | 2016-12-11 | 3.4 | 3.54 | — | 3.4 | 0.008 | 1.13 | 0.0 | 0.05 | 23.72 | 0.01 | 1.757 | 9.01 | 9.93 | 4.9 | 94.8 | 0.3 | -3.33 | 0.90 | 0.86 | 1.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 152465 | 6586 | 86 | 4585 | 955 | 0 | 0 | logfile |
✔ | 5ZEP | 6921 | 2024-03-01 | 2018-02-27 | 3.4 | 5.11 | — | 4.5 | 0.010 | 1.18 | 5.0 | 0.06 | 24.04 | 0.01 | 1.089 | 21.16 | 3.06 | 8.5 | 90.3 | 1.3 | -3.96 | 0.70 | 0.53 | 0.11 | 4.5 | 0.006 | 0.79 | 2.0 | 0.04 | 24.61 | 0.01 | 1.879 | 28.60 | 4.65 | 7.3 | 92.5 | 0.2 | -1.56 | 1.66 | 0.90 | 0.86 | 0.20 | 152451 | 6193 | 58 | 4802 | 262 | 0 | 0 | logfile |
✔ | 7MSC | 23961 | 2024-03-01 | 2021-05-11 | 2.97 | 2.46 | — | 2.9 | 0.009 | 0.88 | 0.0 | 0.05 | 22.15 | 0.01 | 2.009 | 2.25 | 0.12 | 6.9 | 92.9 | 0.2 | -4.68 | 0.85 | 0.87 | 4.04 | 2.9 | 0.009 | 0.75 | 0.0 | 0.04 | 22.31 | 0.01 | 1.767 | 5.50 | 3.63 | 6.7 | 93.1 | 0.2 | -1.54 | 0.40 | 0.85 | 0.88 | 2.99 | 152447 | 6179 | 69 | 4836 | 453 | 0 | 0 | logfile |