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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PK6 | 13466 | 2023-04-24 | 2021-08-25 | 2.15 | 2.27 | 2.23 | 2.3 | 0.005 | 0.60 | 0.0 | 0.05 | 17.06 | 0.01 | 1.864 | 4.25 | 2.22 | 2.0 | 98.0 | 0.0 | 1.43 | 0.73 | 0.77 | 4.80 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 17.46 | 0.00 | 2.152 | 6.42 | 2.12 | 2.2 | 97.8 | 0.0 | 1.53 | 0.87 | 0.78 | 0.88 | 4.85 | 120580 | 15100 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BGL | 12183 | 2023-04-26 | 2021-01-07 | 2.2 | 2.57 | 2.32 | 2.5 | 0.007 | 0.70 | 0.0 | 0.08 | 19.34 | 0.00 | 1.980 | 30.00 | 2.50 | 7.3 | 92.7 | 0.0 | 0.56 | 0.73 | 0.87 | 3.07 | 2.5 | 0.002 | 0.59 | 0.0 | 0.04 | 17.17 | 0.00 | 2.143 | 8.93 | 3.27 | 7.1 | 92.9 | 0.0 | -0.12 | 0.94 | 0.74 | 0.90 | 3.06 | 120484 | 15626 | 104 | 0 | 52 | 0 | 0 | logfile |
✔ | 6M2W | 30067 | 2023-04-23 | 2020-03-01 | 3.8 | 2.59 | 3.89 | 2.6 | 0.006 | 1.08 | 0.0 | 0.05 | 15.58 | 0.01 | 2.276 | 3.96 | 3.59 | 3.1 | 96.9 | 0.0 | -5.38 | 0.77 | 0.64 | 0.21 | 2.1 | 0.003 | 0.63 | 0.0 | 0.04 | 15.54 | 0.00 | 2.105 | 8.78 | 0.22 | 2.8 | 97.2 | 0.0 | 0.30 | 1.82 | 0.83 | 0.79 | 1.96 | 120452 | 14972 | 16 | 0 | 1828 | 0 | 0 | logfile |
✔ | 8DNA | 27560 | 2023-04-23 | 2022-07-11 | 2.77 | 3.01 | 2.93 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.25 | 0.00 | 2.269 | 6.05 | 0.00 | 2.7 | 97.3 | 0.0 | 1.26 | 0.77 | 0.83 | 3.87 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 16.65 | 0.00 | 2.303 | 4.34 | 0.65 | 2.8 | 97.0 | 0.2 | 0.54 | 0.33 | 0.79 | 0.87 | 4.38 | 120420 | 15840 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 4UFT | 2867 | 2023-04-23 | 2015-03-19 | 4.3 | 4.24 | — | 4.2 | 0.005 | 0.96 | 0.0 | 0.05 | 11.26 | 0.00 | 1.169 | 8.53 | 0.31 | 13.2 | 83.9 | 3.0 | -4.63 | 0.54 | 0.70 | — | 4.2 | 0.004 | 0.78 | 0.0 | 0.04 | 13.25 | 0.01 | 2.091 | 11.84 | 0.05 | 8.2 | 90.7 | 1.1 | -2.58 | 1.93 | 0.59 | 0.79 | — | 119847 | 14703 | 78 | 234 | 0 | 0 | 0 | logfile |
✘ | 7K5B | 22679 | 2023-04-23 | 2020-09-16 | 4.5 | 4.62 | — | 3.9 | 0.018 | 1.93 | 50.0 | 0.10 | 12.72 | 0.01 | 0.384 | 37.45 | 2.43 | 4.6 | 94.6 | 0.8 | -0.04 | 0.66 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 119573 | 15602 | 21 | 0 | 18 | 0 | 156 | logfile |
✔ | 6YLX | 10841 | 2023-04-23 | 2020-04-07 | 3.9 | 3.78 | 3.86 | 3.8 | 0.019 | 1.57 | 1.0 | 0.08 | 17.82 | 0.01 | 1.989 | 6.50 | 0.65 | 3.4 | 96.6 | 0.0 | -3.91 | 0.81 | 0.81 | 1.40 | 3.7 | 0.003 | 0.75 | 0.0 | 0.04 | 17.39 | 0.01 | 2.080 | 17.10 | 0.48 | 7.7 | 92.2 | 0.1 | -1.54 | 0.68 | 0.81 | 0.82 | 1.06 | 118882 | 7493 | 47 | 2757 | 0 | 0 | 0 | logfile |
✔ | 6YAM | 10761 | 2023-04-23 | 2020-03-12 | 3.6 | 3.47 | — | 3.5 | 0.021 | 2.06 | 55.0 | 0.12 | 15.03 | 0.02 | 0.634 | 17.64 | 3.01 | 10.8 | 85.2 | 4.0 | -4.49 | 0.39 | 0.52 | 0.80 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 16.51 | 0.00 | 2.048 | 11.35 | 0.48 | 9.5 | 90.2 | 0.3 | -1.76 | 1.54 | 0.45 | 0.63 | 1.12 | 118536 | 9811 | 51 | 1863 | 5 | 0 | 0 | logfile |
✔ | 6Q16 | 20556 | 2023-04-23 | 2019-08-02 | 4.1 | 4.11 | — | 4.1 | 0.007 | 1.05 | 0.0 | 0.06 | 14.24 | 0.01 | 2.214 | 3.99 | 0.67 | 3.6 | 96.4 | 0.0 | -5.13 | 0.85 | 0.83 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 13.91 | 0.00 | 2.101 | 9.20 | 0.01 | 3.7 | 96.3 | 0.0 | -0.13 | 0.76 | 0.86 | 0.84 | — | 118198 | 14787 | 93 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SKL | 10227 | 2023-04-23 | 2019-08-16 | 3.7 | 3.87 | — | 3.7 | 0.013 | 1.93 | 50.0 | 0.11 | 15.18 | 0.02 | 1.901 | 0.27 | 0.09 | 3.3 | 96.7 | 0.0 | -1.69 | 0.71 | 0.72 | 1.97 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 16.54 | 0.00 | 1.787 | 8.63 | 0.19 | 4.0 | 96.0 | 0.0 | 0.38 | 3.48 | 0.74 | 0.78 | 1.67 | 118181 | 7251 | 24 | 59 | 11 | 0 | 58997 | logfile |
✔ | 6ZMW | 11302 | 2023-04-23 | 2020-07-04 | 3.7 | 3.79 | 3.57 | 3.7 | 0.008 | 1.25 | 0.0 | 0.06 | 16.23 | 0.02 | 1.291 | 7.20 | 2.46 | 6.4 | 93.3 | 0.2 | -2.63 | 0.70 | 0.65 | 1.27 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 17.05 | 0.01 | 1.153 | 15.83 | 0.38 | 5.6 | 94.3 | 0.0 | -1.44 | 1.38 | 0.74 | 0.74 | 1.40 | 118155 | 11116 | 62 | 1822 | 91 | 0 | 0 | logfile |
✔ | 6ZP4 | 11335 | 2023-04-23 | 2020-07-08 | 2.9 | 2.98 | — | 2.6 | 0.007 | 0.92 | 0.0 | 0.05 | 15.90 | 0.01 | 2.079 | 4.90 | 0.33 | 5.3 | 94.7 | 0.1 | -3.82 | 0.84 | 0.81 | 2.89 | 2.6 | 0.005 | 0.71 | 0.0 | 0.04 | 16.50 | 0.00 | 1.891 | 10.59 | 2.41 | 5.4 | 94.6 | 0.0 | -0.43 | 0.45 | 0.89 | 0.88 | 2.55 | 117784 | 10408 | 59 | 1796 | 6 | 0 | 0 | logfile |
✔ | 7TDH | 25829 | 2023-04-23 | 2021-12-31 | 4.0 | 4.95 | 4.67 | 4.5 | 0.003 | 0.77 | 0.0 | 0.04 | 13.63 | 0.00 | 2.254 | 4.64 | 0.00 | 5.1 | 94.9 | 0.0 | -1.74 | 0.84 | 0.67 | — | 4.5 | 0.030 | 2.65 | 66.0 | 0.11 | 19.67 | 0.02 | 0.888 | 153.73 | 3.43 | 43.9 | 54.5 | 1.5 | -7.26 | 2.44 | 0.88 | 0.83 | — | 117532 | 13060 | 8 | 0 | 3616 | 0 | 0 | logfile |
✔ | 7TDG | 25828 | 2023-04-23 | 2021-12-31 | 3.8 | 4.00 | 3.85 | 3.8 | 0.086 | 0.81 | 1.0 | 0.04 | 13.97 | 0.00 | 0.831 | 7.84 | 0.28 | 6.6 | 93.4 | 0.1 | -0.49 | 0.83 | 0.79 | 0.99 | 3.8 | 0.056 | 3.18 | 114.0 | 0.16 | 19.71 | 0.02 | 1.714 | 88.48 | 3.87 | 38.2 | 59.5 | 2.3 | -7.40 | 1.18 | 0.86 | 0.86 | 1.36 | 117345 | 12936 | 8 | 0 | 3624 | 0 | 0 | logfile |
✔ | 7SC9 | 25030 | 2023-04-23 | 2021-09-27 | 2.6 | 3.71 | 2.70 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 13.52 | 0.01 | 2.039 | 38.58 | 0.01 | 2.7 | 97.2 | 0.0 | 2.39 | 0.80 | 0.82 | 1.56 | 3.0 | 0.004 | 0.81 | 0.0 | 0.04 | 16.15 | 0.00 | 2.009 | 19.29 | 1.89 | 2.8 | 97.1 | 0.1 | 1.36 | 0.60 | 0.80 | 0.84 | 1.23 | 117262 | 14948 | 164 | 0 | 76 | 0 | 0 | logfile |
✔ | 3JCS | 6583 | 2023-04-23 | 2016-01-21 | 2.8 | 3.07 | — | 3.0 | 0.009 | 0.98 | 1.0 | 0.05 | 19.57 | 0.03 | 1.093 | 24.89 | 1.41 | 11.8 | 88.0 | 0.2 | -5.35 | 0.72 | 0.78 | 3.98 | 3.0 | 0.007 | 0.88 | 0.0 | 0.04 | 19.86 | 0.01 | 1.859 | 18.52 | 3.13 | 10.9 | 89.1 | 0.1 | -2.74 | 0.51 | 0.71 | 0.80 | 2.76 | 117257 | 5847 | 74 | 3420 | 109 | 144 | 0 | logfile |
✔ | 7TDK | 25832 | 2023-04-23 | 2021-12-31 | 3.8 | 4.07 | 3.85 | 3.8 | 0.004 | 0.87 | 0.0 | 0.04 | 15.75 | 0.01 | 2.210 | 4.97 | 0.46 | 5.7 | 94.1 | 0.1 | -0.20 | 0.85 | 0.77 | 1.07 | 3.8 | 0.051 | 3.21 | 71.0 | 0.14 | 19.99 | 0.02 | 1.573 | 100.23 | 3.61 | 38.4 | 59.1 | 2.5 | -7.48 | 2.34 | 0.89 | 0.86 | 1.15 | 117136 | 12936 | 8 | 0 | 3616 | 0 | 0 | logfile |
✔ | 7TDi | 25830 | 2023-04-23 | 2021-12-31 | 3.3 | 3.81 | 3.62 | 3.6 | 0.005 | 0.81 | 0.0 | 0.04 | 16.22 | 0.01 | 2.159 | 4.24 | 0.85 | 4.4 | 95.5 | 0.1 | -0.18 | 0.82 | 0.72 | 0.41 | 3.6 | 0.060 | 3.45 | 153.0 | 0.17 | 19.75 | 0.02 | 1.655 | 78.91 | 3.69 | 33.8 | 63.9 | 2.3 | -7.06 | 1.45 | 0.89 | 0.87 | 1.83 | 117132 | 12936 | 8 | 0 | 3616 | 0 | 0 | logfile |
✔ | 7TDJ | 25831 | 2023-04-23 | 2021-12-31 | 3.7 | 3.93 | 3.79 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 15.74 | 0.01 | 2.223 | 5.62 | 0.37 | 6.0 | 93.9 | 0.2 | -0.38 | 0.85 | 0.77 | 1.01 | 3.7 | 0.056 | 3.34 | 152.0 | 0.16 | 20.01 | 0.02 | 1.738 | 94.23 | 2.94 | 37.0 | 60.2 | 2.7 | -7.31 | 1.34 | 0.89 | 0.86 | 1.52 | 117112 | 12932 | 12 | 0 | 3616 | 8 | 0 | logfile |
✔ | 8ESR | 24422 | 2023-04-23 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.69 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.005 | 0.57 | 0.0 | 0.04 | 15.74 | 0.00 | 2.095 | 10.25 | 0.32 | 4.1 | 95.9 | 0.1 | 1.10 | 0.34 | 0.78 | 0.77 | 2.07 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |