The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6TGY | 10501 | 2022-12-17 | 2019-11-18 | 3.5 | 3.59 | 3.49 | 3.5 | 0.007 | 1.10 | 0.0 | 0.05 | 10.46 | 0.01 | 2.359 | 1.88 | 0.00 | 16.6 | 83.4 | 0.0 | -5.42 | 0.69 | 0.73 | 3.89 | 3.5 | 0.006 | 0.67 | 0.0 | 0.04 | 14.80 | 0.01 | 2.126 | 6.92 | 0.59 | 13.9 | 86.1 | 0.0 | -1.15 | 0.75 | 0.76 | 0.83 | 2.91 | 96960 | 12480 | 120 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XXF | 33501 | 2022-12-16 | 2022-05-30 | 2.24 | 2.16 | 2.23 | 2.2 | 0.023 | 2.96 | 0.0 | 0.05 | 21.47 | 0.02 | 2.014 | 7.37 | 1.31 | 2.8 | 97.2 | 0.0 | 1.59 | 0.77 | 0.88 | 5.31 | 2.2 | 0.003 | 1.45 | 0.0 | 0.04 | 17.62 | 0.00 | 2.003 | 7.41 | 1.06 | 2.7 | 97.3 | 0.0 | 2.34 | 0.38 | 0.77 | 0.90 | 4.45 | 29826 | 3004 | 120 | 0 | 98 | 538 | 0 | logfile |
✔ | 6J40 | 9777 | 2022-12-17 | 2019-01-07 | 3.8 | 4.30 | — | 3.8 | 0.022 | 1.96 | 4.0 | 0.18 | 19.08 | 0.01 | 1.376 | 17.83 | 0.33 | 4.5 | 95.5 | 0.0 | -5.08 | 0.80 | 0.72 | 1.93 | 3.8 | 0.004 | 0.76 | 0.0 | 0.04 | 16.55 | 0.00 | 1.476 | 18.04 | 0.25 | 4.5 | 95.5 | 0.0 | -0.13 | 0.71 | 0.84 | 0.78 | 1.59 | 96390 | 8392 | 120 | 0 | 1656 | 0 | 0 | logfile |
✔ | 7QSM | 14134 | 2022-12-14 | 2022-01-13 | 2.3 | 2.31 | — | 2.3 | 0.007 | 0.92 | 0.0 | 0.85 | 15.66 | 0.00 | 1.860 | 3.77 | 0.58 | 2.3 | 97.6 | 0.0 | 0.75 | 0.76 | 0.90 | 6.42 | 2.3 | 0.007 | 1.29 | 0.0 | 0.26 | 16.10 | 0.00 | 1.922 | 5.70 | 0.79 | 1.7 | 98.3 | 0.0 | 1.78 | 0.81 | 0.77 | 0.91 | 5.66 | 71639 | 8262 | 118 | 0 | 62 | 2774 | 0 | logfile |
✔ | 7QSK | 14132 | 2022-12-14 | 2022-01-13 | 2.84 | 2.93 | 2.90 | 2.8 | 0.008 | 0.91 | 0.0 | 0.84 | 15.03 | 0.00 | 1.896 | 4.27 | 0.15 | 3.1 | 96.9 | 0.1 | 0.26 | 0.77 | 0.87 | 4.81 | 2.9 | 0.007 | 1.30 | 0.0 | 0.25 | 16.17 | 0.00 | 2.002 | 7.15 | 0.93 | 2.0 | 98.0 | 0.0 | 1.75 | 0.50 | 0.78 | 0.89 | 3.93 | 69986 | 8291 | 116 | 0 | 59 | 1060 | 0 | logfile |
✔ | 7ARD | 11880 | 2022-12-14 | 2020-10-23 | 3.11 | 3.05 | — | 3.0 | 0.005 | 0.90 | 0.0 | 0.05 | 14.05 | 0.01 | 1.852 | 13.15 | 0.04 | 2.1 | 97.9 | 0.0 | 0.94 | 0.78 | 0.86 | 3.25 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 15.82 | 0.00 | 2.072 | 8.27 | 0.22 | 2.3 | 97.7 | 0.0 | 1.34 | 0.98 | 0.78 | 0.89 | 2.91 | 70559 | 8515 | 116 | 0 | 264 | 782 | 0 | logfile |
✔ | 7QSN | 14139 | 2022-12-14 | 2022-01-13 | 2.81 | 2.74 | 2.82 | 2.7 | 0.008 | 0.92 | 0.0 | 0.85 | 15.14 | 0.00 | 1.853 | 4.76 | 0.01 | 3.3 | 96.7 | 0.0 | -0.45 | 0.77 | 0.87 | 4.68 | 2.7 | 0.007 | 1.31 | 0.0 | 0.25 | 16.33 | 0.00 | 2.035 | 7.33 | 1.12 | 2.2 | 97.8 | 0.0 | 1.37 | 1.17 | 0.77 | 0.88 | 3.98 | 69319 | 8201 | 116 | 0 | 59 | 1096 | 0 | logfile |
✔ | 7SCA | 25031 | 2022-12-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.53 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.54 | 0.0 | 0.04 | 16.62 | 0.00 | 2.126 | 8.47 | 0.98 | 0.9 | 99.1 | 0.0 | 2.90 | 1.09 | 0.79 | 0.85 | 5.23 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7SC8 | 25029 | 2022-12-12 | 2021-09-27 | 2.1 | 2.19 | 2.13 | 1.9 | 0.008 | 1.12 | 10.0 | 0.07 | 15.00 | 0.01 | 2.102 | 5.31 | 0.38 | 1.0 | 99.0 | 0.0 | 2.13 | 0.82 | 0.79 | 4.35 | 1.9 | 0.005 | 0.58 | 0.0 | 0.04 | 16.44 | 0.00 | 2.142 | 8.47 | 0.98 | 1.2 | 98.8 | 0.0 | 2.80 | 0.36 | 0.86 | 0.87 | 4.18 | 56784 | 6836 | 116 | 0 | 54 | 2672 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-12-11 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.12 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.006 | 0.91 | 0.0 | 0.05 | 19.05 | 0.01 | 2.010 | 12.97 | 2.06 | 2.8 | 97.1 | 0.0 | 0.50 | 0.91 | 0.81 | 0.84 | 5.43 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7N8o | 24239 | 2022-12-11 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.96 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.62 | 0.01 | 2.011 | 12.03 | 1.57 | 2.8 | 97.2 | 0.0 | 1.10 | 0.35 | 0.75 | 0.77 | 5.40 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7QSL | 14133 | 2022-12-14 | 2022-01-13 | 2.76 | 2.80 | 2.81 | 2.7 | 0.010 | 0.96 | 0.0 | 0.84 | 14.06 | 0.00 | 1.710 | 4.91 | 0.06 | 3.1 | 96.8 | 0.0 | -0.57 | 0.78 | 0.89 | 5.14 | 2.7 | 0.007 | 1.30 | 0.0 | 0.25 | 15.74 | 0.00 | 1.521 | 6.90 | 0.91 | 2.0 | 97.9 | 0.0 | 1.52 | 0.87 | 0.78 | 0.90 | 4.16 | 69733 | 8287 | 109 | 0 | 56 | 1024 | 0 | logfile |
✘ | 7oUi | 13078 | 2022-12-19 | 2021-06-11 | 2.79 | 3.20 | — | 3.1 | 0.017 | 1.97 | 0.0 | 0.06 | 17.68 | 0.04 | 1.216 | 52.17 | 1.81 | 5.1 | 94.7 | 0.2 | 0.45 | 0.63 | 0.78 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 84427 | 8342 | 108 | 0 | 374 | 139 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-12-19 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 6WL8 | 21817 | 2022-12-15 | 2020-04-18 | 4.1 | 4.58 | — | 4.3 | 0.005 | 0.65 | 0.0 | 0.05 | 15.48 | 0.00 | 2.395 | 2.78 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.73 | 0.86 | — | 4.2 | 0.004 | 0.76 | 0.0 | 0.04 | 14.63 | 0.00 | 2.281 | 14.04 | 0.00 | 0.5 | 99.5 | 0.0 | 3.46 | 2.62 | 0.74 | 0.87 | — | 23850 | 3074 | 106 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D1U | 30548 | 2022-12-22 | 2020-09-15 | 2.08 | 1.94 | 2.04 | 2.0 | 0.018 | 1.83 | 27.0 | 0.10 | 18.50 | 0.02 | 1.202 | 4.10 | 3.09 | 2.3 | 97.5 | 0.2 | -1.36 | 0.74 | 0.87 | 6.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✔ | 6WKX | 21812 | 2022-12-13 | 2020-04-17 | 4.2 | 4.31 | — | 4.2 | 0.006 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 2.298 | 2.52 | 0.00 | 0.0 | 100.0 | 0.0 | -3.67 | 0.77 | 0.90 | — | 4.2 | 0.004 | 0.66 | 0.0 | 0.04 | 16.54 | 0.00 | 2.187 | 8.89 | 0.00 | 0.0 | 100.0 | 0.0 | 4.22 | 1.00 | 0.77 | 0.89 | — | 12915 | 1575 | 105 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL9 | 21818 | 2022-12-15 | 2020-04-18 | 4.2 | 4.68 | — | 4.4 | 0.006 | 0.53 | 0.0 | 0.04 | 13.18 | 0.00 | 2.052 | 24.33 | 0.00 | 1.9 | 98.1 | 0.0 | 1.21 | 0.74 | 0.87 | — | 4.4 | 0.004 | 0.88 | 0.0 | 0.05 | 13.49 | 0.00 | 2.197 | 19.25 | 0.09 | 0.2 | 99.8 | 0.0 | 2.25 | 1.51 | 0.73 | 0.86 | — | 23400 | 3016 | 104 | 0 | 0 | 0 | 0 | logfile |
✘ | 6KAF | 9957 | 2022-12-19 | 2019-06-22 | 3.73 | 3.95 | — | 3.7 | 0.014 | 1.69 | 0.0 | 0.10 | 16.92 | 0.01 | 1.212 | 7.91 | 0.62 | 10.0 | 90.0 | 0.1 | -3.68 | 0.78 | 0.73 | 2.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 104363 | 9607 | 104 | 0 | 552 | 0 | 0 | logfile |
✘ | 7oY8 | 13110 | 2022-12-18 | 2021-06-23 | 2.5 | 2.51 | — | 2.6 | 0.008 | 0.95 | 0.0 | 0.05 | 15.57 | 0.01 | 1.197 | 0.88 | 0.21 | 2.4 | 97.6 | 0.0 | 0.49 | 0.72 | 0.78 | 2.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22902 | 2293 | 103 | 0 | 68 | 372 | 0 | logfile |