Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6J40	9777	2022-05-17	2019-01-07	3.8	4.30	—	3.8	0.112	3.69	4.0	0.19	22.67	0.03	1.376	17.75	0.33	4.5	95.5	0.0	-5.08	0.80	0.72	1.93	3.8	0.010	2.83	2.0	0.07	23.51	0.01	1.298	67.53	0.48	4.9	95.1	0.0	-3.01	0.53	0.83	0.76	1.84	96390	8392	120	0	1656	0	0	logfile
✔	6TGY	10501	2022-05-17	2019-11-18	3.5	3.59	3.49	3.5	0.007	1.10	0.0	0.05	10.46	0.01	2.359	1.88	0.00	16.6	83.4	0.0	-5.42	0.69	0.73	3.89	3.5	0.004	0.65	0.0	0.04	14.75	0.01	2.113	6.63	0.57	13.6	86.4	0.0	-1.15	0.75	0.76	0.84	2.87	96960	12480	120	0	0	0	0	logfile
✔	7L6E	23202	2022-05-03	2020-12-23	3.15	3.55	—	3.5	0.010	0.87	0.0	0.05	9.13	0.01	1.753	15.38	0.67	2.7	97.3	0.0	-2.02	0.71	0.90	5.86	3.5	0.002	0.58	0.0	0.04	14.24	0.00	2.164	8.24	0.13	2.7	97.3	0.0	-0.64	0.51	0.71	0.91	4.25	248700	31260	120	60	0	0	0	logfile
✔	7RL1	24513	2022-05-04	2021-07-23	2.71	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	249480	31140	120	120	0	0	0	logfile
✔	7LTM	23516	2022-05-04	2021-02-19	2.49	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	249300	31080	120	60	0	0	0	logfile
✔	6V1G	21011	2022-05-04	2019-11-20	2.98	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	249900	31200	120	120	0	0	0	logfile
✔	6V10	21004	2022-05-05	2019-11-19	3.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	250920	31260	120	120	0	0	0	logfile
✔	7MTZ	24000	2022-05-03	2021-05-14	2.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	248580	31080	120	0	60	0	0	logfile
✔	7A4F	11631	2022-05-18	2020-08-19	3.5	3.84	3.48	3.7	0.002	0.45	0.0	0.04	11.66	0.00	2.212	6.45	3.31	2.4	97.6	0.0	1.60	0.78	0.84	1.24	3.7	0.003	0.61	0.0	0.04	15.28	0.00	2.099	10.67	0.37	2.1	97.9	0.0	2.04	2.15	0.79	0.85	0.77	141432	18540	120	0	0	0	0	logfile
✔	6WH3	21667	2022-05-25	2020-04-07	2.96	3.01	—	3.0	0.011	1.09	60.0	0.08	9.53	0.01	2.204	31.73	0.68	3.9	96.1	0.0	-1.75	0.74	0.87	5.56	3.0	0.003	0.62	0.0	0.05	16.13	0.00	2.083	15.35	3.35	5.8	94.2	0.0	-0.80	0.62	0.71	0.88	4.60	157740	20040	120	0	60	0	0	logfile
✔	7MUA	24003	2022-05-02	2021-05-14	2.68	2.83	—	2.8	0.011	0.96	0.0	0.06	10.42	0.01	2.167	11.95	0.22	1.9	97.9	0.2	-0.79	0.85	0.91	5.54	2.8	0.006	0.69	0.0	0.05	15.37	0.00	2.035	7.81	2.14	2.9	97.1	0.0	-0.36	0.50	0.85	0.92	4.96	248580	31080	120	0	60	0	0	logfile
✔	7L6A	23200	2022-05-04	2020-12-23	2.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	250440	31260	120	60	0	0	0	logfile
✔	7L5U	23190	2022-05-04	2020-12-22	3.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	250020	31200	120	60	0	0	0	logfile
✔	7L6H	23204	2022-05-05	2020-12-23	3.0	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	251400	31020	120	60	0	0	0	logfile
✔	6V1Z	21020	2022-05-05	2019-11-21	3.58	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	250920	31260	120	120	0	0	0	logfile
✔	6X62	22068	2022-05-13	2020-05-27	3.5	3.69	—	3.7	0.014	1.87	45.0	0.09	15.63	0.01	2.185	7.00	4.90	8.5	91.5	0.0	-3.87	0.65	0.64	0.52	3.6	0.006	0.94	1.0	0.05	16.43	0.01	2.008	21.57	1.10	7.4	92.6	0.0	-1.82	1.25	0.74	0.82	1.18	109070	15548	117	0	0	0	0	logfile
✔	7K00	22586	2022-05-21	2020-09-02	1.98	1.72	—	1.9	0.007	0.96	3.0	0.05	15.24	0.02	1.588	7.51	6.32	3.9	96.0	0.1	-1.76	0.69	0.83	5.00	1.8	0.006	0.84	0.0	0.04	15.29	0.01	1.757	8.10	3.17	3.9	96.1	0.0	0.01	0.86	0.71	0.86	4.96	149338	5585	117	4555	331	7248	0	logfile
✔	6X66	22071	2022-05-13	2020-05-27	4.2	6.75	—	8.4	0.016	1.73	27.0	0.08	14.04	0.01	2.162	21.83	0.38	12.3	87.7	0.0	-3.77	0.72	0.45	—	4.2	0.005	0.83	1.0	0.05	12.76	0.00	1.950	22.58	0.00	6.7	93.3	0.0	-2.20	2.57	0.77	0.70	—	109070	15548	117	0	0	0	0	logfile
✔	5WE4	8814	2022-05-25	2017-07-07	3.1	3.04	3.02	3.0	0.008	1.16	3.0	0.10	17.51	0.02	1.575	3.80	3.52	9.8	87.9	2.3	-4.03	0.78	0.81	2.62	3.0	0.009	0.94	0.0	0.05	17.15	0.01	0.977	12.76	0.99	9.2	90.2	0.6	-2.13	3.97	0.83	0.82	2.48	155067	6324	117	4802	1620	996	0	logfile
✔	7ARD	11880	2022-05-14	2020-10-23	3.11	3.05	—	3.0	0.005	0.90	0.0	0.05	14.05	0.01	1.852	12.30	0.04	2.1	97.9	0.0	0.94	0.78	0.86	3.25	3.0	0.003	0.59	0.0	0.04	15.92	0.00	2.070	7.50	0.19	2.6	97.4	0.0	1.26	0.98	0.79	0.89	2.95	70559	8515	116	0	264	782	0	logfile

• ← previous
• Page 4 of 376
• next →