The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LQi | 23487 | 2023-08-10 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.77 | 3.33 | 46.5 | 53.5 | 0.0 | -7.05 | 1.54 | 0.65 | 0.83 | 2.52 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VB9 | 31875 | 2023-08-23 | 2021-08-30 | 3.45 | 3.03 | — | 3.3 | 0.019 | 1.97 | 0.0 | 0.04 | 17.13 | 0.05 | 2.077 | 14.17 | 3.01 | 2.8 | 97.2 | 0.0 | 2.33 | 0.62 | 0.77 | 2.94 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 17.15 | 0.00 | 1.743 | 10.91 | 0.25 | 2.4 | 97.6 | 0.0 | 2.13 | 1.79 | 0.65 | 0.82 | 2.64 | 36474 | 3807 | 100 | 0 | 107 | 0 | 0 | logfile |
✘ | 6TRC | 10558 | 2023-08-18 | 2019-12-18 | 2.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75591 | 6849 | 99 | 0 | 402 | 651 | 0 | logfile |
✔ | 7Q2Q | 13780 | 2023-08-12 | 2021-10-26 | 4.3 | 3.37 | — | 3.6 | 0.010 | 1.40 | 0.0 | 0.08 | 11.79 | 0.01 | 1.166 | 18.08 | 0.00 | 8.5 | 90.7 | 0.8 | -4.23 | 0.58 | 0.71 | — | 3.3 | 0.005 | 0.75 | 0.0 | 0.04 | 14.75 | 0.01 | 2.066 | 14.62 | 0.15 | 5.0 | 95.0 | 0.0 | -1.77 | 1.52 | 0.60 | 0.75 | — | 62377 | 7497 | 98 | 147 | 0 | 0 | 0 | logfile |
✘ | 2XEA | 1730 | 2023-08-12 | 2010-05-12 | 4.6 | 4.10 | — | 4.2 | 0.012 | 2.12 | 0.0 | 0.12 | 20.46 | 0.02 | 1.226 | 2.63 | 3.68 | 8.6 | 90.1 | 1.3 | -3.51 | 0.39 | 0.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62671 | 7546 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2023-08-12 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.08 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.2 | 0.003 | 0.88 | 0.0 | 0.04 | 20.32 | 0.01 | 2.209 | 17.76 | 0.98 | 6.9 | 91.2 | 1.8 | -3.04 | 1.28 | 0.55 | 0.78 | 2.20 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 7UUQ | 26800 | 2023-08-09 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.014 | 2.95 | 0.0 | 0.06 | 20.39 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.71 | 11.0 | 0.23 | 25.10 | 0.02 | 1.642 | 53.03 | 1.10 | 65.5 | 31.5 | 3.0 | -10.63 | 0.67 | 0.73 | 0.90 | 3.96 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 7Q2S | 13782 | 2023-08-12 | 2021-10-26 | 3.7 | 3.23 | — | 3.3 | 0.010 | 1.40 | 0.0 | 0.08 | 11.79 | 0.01 | 1.217 | 18.46 | 0.00 | 8.6 | 90.7 | 0.7 | -4.24 | 0.45 | 0.63 | 1.80 | 3.2 | 0.004 | 0.86 | 0.0 | 0.04 | 18.00 | 0.00 | 1.961 | 19.66 | 0.92 | 6.9 | 93.1 | 0.0 | -3.02 | 1.12 | 0.52 | 0.69 | 1.92 | 62377 | 7497 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 7o3W | 12710 | 2023-08-22 | 2021-04-03 | 4.9 | 6.81 | 5.80 | 7.1 | 0.017 | 1.84 | 0.0 | 0.11 | 18.08 | 0.01 | 0.360 | 24.19 | 0.30 | 3.5 | 96.4 | 0.2 | 1.74 | 0.66 | 0.54 | — | 7.1 | 0.004 | 0.92 | 0.0 | 0.04 | 15.52 | 0.00 | 1.988 | 27.22 | 0.01 | 1.6 | 98.3 | 0.1 | 1.59 | 2.07 | 0.75 | 0.81 | — | 138390 | 17976 | 98 | 0 | 14 | 0 | 0 | logfile |
✔ | 6J3Z | 9776 | 2023-08-18 | 2019-01-07 | 3.6 | 3.78 | — | 3.6 | 0.019 | 1.82 | 4.0 | 0.15 | 17.99 | 0.01 | 1.392 | 13.61 | 0.28 | 4.3 | 95.7 | 0.0 | -5.08 | 0.80 | 0.81 | 3.43 | 3.6 | 0.004 | 0.71 | 0.0 | 0.04 | 17.15 | 0.00 | 1.596 | 14.19 | 0.59 | 3.4 | 96.6 | 0.0 | -0.05 | 0.75 | 0.80 | 0.82 | 2.53 | 74619 | 6984 | 97 | 0 | 978 | 0 | 0 | logfile |
✘ | 7FiX | 31605 | 2023-08-18 | 2021-08-01 | 1.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73929 | 7137 | 96 | 0 | 444 | 348 | 0 | logfile |
✔ | 6YJ4 | 10815 | 2023-08-13 | 2020-04-02 | 2.7 | 2.35 | 2.73 | 2.6 | 0.011 | 1.10 | 0.0 | 0.65 | 14.88 | 0.01 | 2.031 | 2.88 | 0.03 | 4.1 | 95.8 | 0.0 | -2.17 | 0.58 | 0.79 | 4.22 | 2.6 | 0.005 | 1.02 | 0.0 | 0.18 | 16.77 | 0.00 | 1.387 | 7.10 | 1.40 | 3.4 | 96.6 | 0.0 | 0.78 | 0.57 | 0.63 | 0.84 | 3.70 | 66311 | 8126 | 94 | 0 | 50 | 275 | 0 | logfile |
✘ | 6KAD | 9956 | 2023-08-26 | 2019-06-21 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 105342 | 9734 | 94 | 0 | 560 | 0 | 0 | logfile |
✘ | 7Uii | 26546 | 2023-08-18 | 2022-03-29 | 2.6 | 2.91 | 2.65 | 2.9 | 0.003 | 0.61 | 0.0 | 0.05 | 13.58 | 0.00 | 2.234 | 5.76 | 0.00 | 5.1 | 94.9 | 0.0 | -0.77 | 0.60 | 0.87 | 4.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 130944 | 16926 | 93 | 0 | 186 | 186 | 0 | logfile |
✔ | 6Q16 | 20556 | 2023-08-14 | 2019-08-02 | 4.1 | 4.11 | — | 4.1 | 0.007 | 1.05 | 0.0 | 0.06 | 14.24 | 0.01 | 2.214 | 3.99 | 0.67 | 3.6 | 96.4 | 0.0 | -5.13 | 0.85 | 0.83 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 13.91 | 0.00 | 2.101 | 9.20 | 0.01 | 3.7 | 96.3 | 0.0 | -0.13 | 0.76 | 0.86 | 0.84 | — | 118198 | 14787 | 93 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ET5 | 3951 | 2023-08-21 | 2017-10-25 | 2.87 | 4.09 | 3.11 | 3.5 | 0.025 | 2.86 | 202.0 | 0.21 | 21.56 | 0.03 | 1.592 | 33.46 | 8.13 | 12.2 | 83.7 | 4.1 | -5.05 | 0.80 | 0.85 | 3.34 | 3.5 | 0.004 | 1.00 | 0.0 | 0.04 | 18.75 | 0.00 | 2.042 | 14.51 | 1.88 | 8.8 | 90.8 | 0.4 | -0.16 | 1.31 | 0.79 | 0.85 | 3.04 | 31994 | 3492 | 92 | 0 | 75 | 0 | 0 | logfile |
✘ | 7WG5 | 32477 | 2023-08-11 | 2021-12-28 | 3.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112687 | 11759 | 92 | 0 | 545 | 0 | 0 | logfile |
✔ | 7JJJ | 22354 | 2023-08-10 | 2020-07-26 | 4.5 | 4.63 | 4.47 | 4.5 | 0.020 | 1.79 | 0.0 | 0.13 | 10.01 | 0.01 | 2.377 | 0.90 | 0.07 | 2.0 | 98.0 | 0.0 | 0.68 | 0.79 | 0.80 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.05 | 12.38 | 0.00 | 2.113 | 11.30 | 0.00 | 4.0 | 96.0 | 0.0 | -0.22 | 1.44 | 0.80 | 0.83 | — | 54614 | 6674 | 92 | 0 | 182 | 0 | 0 | logfile |
✘ | 7DCo | 30637 | 2023-08-18 | 2020-10-26 | 2.5 | 2.59 | — | 2.6 | 0.010 | 1.11 | 8.0 | 0.08 | 13.06 | 0.01 | 2.079 | 5.90 | 1.87 | 4.4 | 95.1 | 0.5 | -3.91 | 0.53 | 0.65 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 129875 | 15294 | 91 | 556 | 24 | 1714 | 0 | logfile |
✔ | 6AZ3 | 7025 | 2023-08-17 | 2017-09-09 | 2.5 | 3.08 | — | 3.1 | 0.012 | 1.29 | 0.0 | 0.06 | 16.54 | 0.03 | 1.349 | 4.53 | 0.96 | 6.4 | 93.4 | 0.2 | -4.53 | 0.54 | 0.78 | 5.15 | 3.1 | 0.006 | 0.88 | 0.0 | 0.04 | 17.29 | 0.01 | 1.945 | 8.72 | 3.08 | 6.3 | 93.6 | 0.1 | -1.41 | 0.34 | 0.54 | 0.80 | 3.89 | 126561 | 6390 | 91 | 3507 | 44 | 1019 | 0 | logfile |