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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZKK | 11252 | 2023-02-26 | 2020-06-30 | 3.7 | 3.93 | — | 3.9 | 0.007 | 1.02 | 0.0 | 1.02 | 11.66 | 0.01 | 2.209 | 5.94 | 0.10 | 5.1 | 94.8 | 0.0 | -3.56 | 0.53 | 0.75 | 2.24 | 3.9 | 0.008 | 1.61 | 0.0 | 0.31 | 15.90 | 0.00 | 2.054 | 15.92 | 0.47 | 4.8 | 95.2 | 0.0 | -0.49 | 0.75 | 0.55 | 0.76 | 1.48 | 67950 | 8227 | 68 | 0 | 44 | 0 | 0 | logfile |
✔ | 7V2D | 31641 | 2023-02-25 | 2021-08-08 | 3.3 | 3.60 | — | 3.6 | 0.006 | 0.78 | 2.0 | 0.04 | 16.38 | 0.01 | 1.477 | 10.48 | 0.18 | 3.8 | 96.1 | 0.1 | 1.15 | 0.80 | 0.87 | 2.71 | 3.5 | 0.007 | 0.69 | 0.0 | 0.05 | 16.43 | 0.00 | 2.076 | 8.60 | 0.44 | 4.6 | 95.4 | 0.0 | 0.93 | 0.34 | 0.82 | 0.90 | 2.59 | 66899 | 8140 | 68 | 0 | 40 | 0 | 0 | logfile |
✔ | 7W1T | 32255 | 2023-02-26 | 2021-11-20 | 3.0 | 3.11 | — | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 15.74 | 0.01 | 2.078 | 8.15 | 0.14 | 3.8 | 96.2 | 0.1 | 0.74 | 0.78 | 0.86 | 3.42 | 3.1 | 0.004 | 0.61 | 0.0 | 0.04 | 17.09 | 0.00 | 2.091 | 7.60 | 1.82 | 4.0 | 95.9 | 0.0 | 0.94 | 0.49 | 0.79 | 0.89 | 3.14 | 68014 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✔ | 7PC2 | 13316 | 2023-02-26 | 2021-08-03 | 2.8 | 3.39 | — | 6.5 | 0.033 | 1.53 | 5.0 | 0.05 | 15.16 | 0.01 | 1.809 | 8.92 | 1.49 | 7.8 | 92.2 | 0.0 | -3.81 | 0.43 | 0.05 | -0.14 | 2.9 | 0.006 | 1.00 | 0.0 | 0.06 | 16.43 | 0.01 | 2.020 | 21.81 | 3.39 | 7.4 | 92.6 | 0.1 | -1.61 | 1.49 | 0.61 | 0.43 | 0.42 | 27063 | 3093 | 68 | 0 | 210 | 0 | 0 | logfile |
✔ | 7VZV | 32230 | 2023-02-26 | 2021-11-16 | 3.2 | 3.41 | — | 3.3 | 0.007 | 0.80 | 0.0 | 0.04 | 17.47 | 0.01 | 2.195 | 7.81 | 0.29 | 4.1 | 95.9 | 0.0 | 1.16 | 0.80 | 0.89 | 2.87 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 16.49 | 0.00 | 2.082 | 7.33 | 0.14 | 3.6 | 96.3 | 0.0 | 1.30 | 0.24 | 0.80 | 0.89 | 2.74 | 68183 | 8269 | 68 | 0 | 44 | 0 | 0 | logfile |
✔ | 7W4G | 32304 | 2023-02-26 | 2021-11-27 | 3.1 | 3.14 | — | 3.1 | 0.007 | 0.82 | 0.0 | 0.04 | 18.13 | 0.01 | 2.149 | 7.57 | 0.24 | 3.7 | 96.2 | 0.1 | 1.04 | 0.79 | 0.88 | 3.09 | 3.1 | 0.002 | 0.53 | 0.0 | 0.04 | 17.13 | 0.00 | 2.115 | 7.19 | 0.22 | 3.9 | 96.1 | 0.0 | 1.29 | 0.28 | 0.79 | 0.88 | 2.98 | 68260 | 8270 | 68 | 0 | 47 | 0 | 0 | logfile |
✔ | 7V2R | 31647 | 2023-02-26 | 2021-08-09 | 2.6 | 2.62 | — | 2.6 | 0.007 | 0.91 | 13.0 | 0.06 | 17.82 | 0.01 | 1.360 | 8.98 | 1.24 | 3.6 | 96.2 | 0.1 | 1.07 | 0.78 | 0.87 | 3.78 | 2.6 | 0.003 | 0.55 | 0.0 | 0.04 | 17.30 | 0.00 | 2.179 | 6.51 | 1.45 | 3.8 | 96.2 | 0.0 | 1.20 | 0.28 | 0.79 | 0.89 | 3.44 | 68260 | 8270 | 68 | 0 | 47 | 0 | 0 | logfile |
✔ | 6ZKS | 11260 | 2023-02-25 | 2020-06-30 | 3.1 | 2.60 | — | 2.9 | 0.007 | 0.99 | 0.0 | 1.03 | 11.50 | 0.01 | 2.218 | 5.14 | 0.10 | 3.9 | 96.1 | 0.0 | -3.09 | 0.57 | 0.78 | 3.67 | 2.9 | 0.009 | 1.60 | 0.0 | 0.31 | 15.92 | 0.00 | 2.137 | 11.67 | 0.31 | 3.6 | 96.4 | 0.0 | 0.28 | 0.65 | 0.60 | 0.81 | 2.88 | 66294 | 8070 | 67 | 0 | 36 | 0 | 0 | logfile |
✔ | 7B93 | 12095 | 2023-02-26 | 2020-12-14 | 3.04 | 3.13 | 3.09 | 3.0 | 0.006 | 0.81 | 0.0 | 1.03 | 14.70 | 0.00 | 1.904 | 7.72 | 0.03 | 4.1 | 95.9 | 0.0 | -3.26 | 0.76 | 0.85 | 4.00 | 3.0 | 0.008 | 1.59 | 0.0 | 0.31 | 15.82 | 0.00 | 1.949 | 7.99 | 0.14 | 3.1 | 96.9 | 0.0 | 0.99 | 1.17 | 0.77 | 0.88 | 3.14 | 67492 | 8235 | 67 | 0 | 35 | 0 | 0 | logfile |
✔ | 7W1P | 32254 | 2023-02-25 | 2021-11-19 | 3.1 | 3.14 | — | 3.1 | 0.007 | 0.76 | 1.0 | 0.04 | 17.57 | 0.01 | 2.111 | 7.49 | 0.21 | 3.8 | 96.1 | 0.0 | 1.03 | 0.80 | 0.88 | 2.94 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 17.00 | 0.00 | 2.097 | 7.88 | 0.24 | 4.4 | 95.6 | 0.0 | 0.92 | 0.25 | 0.81 | 0.89 | 2.89 | 66868 | 8140 | 67 | 0 | 40 | 0 | 0 | logfile |
✔ | 7o6Y | 12741 | 2023-02-24 | 2021-04-12 | 3.4 | 3.51 | 3.37 | 3.4 | 0.009 | 1.09 | 11.0 | 0.10 | 15.47 | 0.01 | 1.892 | 15.31 | 0.65 | 3.5 | 96.4 | 0.1 | -0.16 | 0.68 | 0.83 | 2.82 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 16.47 | 0.00 | 1.441 | 10.50 | 0.47 | 3.6 | 96.4 | 0.0 | 0.44 | 1.03 | 0.71 | 0.85 | 2.46 | 64866 | 7927 | 67 | 0 | 49 | 0 | 0 | logfile |
✔ | 6ZKT | 11261 | 2023-02-25 | 2020-06-30 | 2.8 | 2.58 | — | 2.8 | 0.008 | 1.00 | 0.0 | 1.03 | 11.56 | 0.01 | 2.200 | 4.90 | 0.07 | 3.9 | 96.1 | 0.0 | -2.94 | 0.57 | 0.81 | 4.03 | 2.8 | 0.009 | 1.61 | 0.0 | 0.31 | 16.51 | 0.00 | 2.075 | 11.61 | 2.18 | 3.6 | 96.4 | 0.0 | 0.31 | 1.63 | 0.59 | 0.83 | 3.13 | 66294 | 8070 | 67 | 0 | 36 | 0 | 0 | logfile |
✔ | 7W2Y | 32267 | 2023-02-26 | 2021-11-24 | 2.7 | 2.80 | — | 2.8 | 0.008 | 0.80 | 1.0 | 0.04 | 17.91 | 0.01 | 2.196 | 6.93 | 1.05 | 3.1 | 96.8 | 0.1 | 0.97 | 0.79 | 0.89 | 3.92 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 17.31 | 0.00 | 2.143 | 6.53 | 1.76 | 3.1 | 96.9 | 0.1 | 1.35 | 1.10 | 0.78 | 0.88 | 3.69 | 68232 | 8270 | 67 | 0 | 46 | 0 | 0 | logfile |
✔ | 7V30 | 31648 | 2023-02-25 | 2021-08-10 | 2.7 | 2.83 | — | 2.8 | 0.007 | 0.83 | 3.0 | 0.05 | 15.59 | 0.01 | 1.788 | 9.45 | 0.21 | 3.7 | 96.2 | 0.1 | 1.16 | 0.78 | 0.86 | 3.12 | 2.8 | 0.004 | 0.62 | 0.0 | 0.04 | 17.26 | 0.01 | 2.066 | 7.29 | 1.36 | 4.1 | 95.8 | 0.0 | 0.68 | 0.37 | 0.78 | 0.88 | 3.08 | 66820 | 8140 | 67 | 0 | 39 | 0 | 0 | logfile |
✔ | 6ZKM | 11254 | 2023-02-25 | 2020-06-30 | 2.8 | 2.40 | — | 2.6 | 0.008 | 1.03 | 0.0 | 1.04 | 11.60 | 0.01 | 2.229 | 5.03 | 0.10 | 3.5 | 96.5 | 0.0 | -2.74 | 0.65 | 0.82 | 4.06 | 2.7 | 0.008 | 1.60 | 0.0 | 0.31 | 16.48 | 0.00 | 2.084 | 11.77 | 1.98 | 3.0 | 97.0 | 0.0 | 0.60 | 1.25 | 0.65 | 0.84 | 3.21 | 65955 | 8002 | 67 | 0 | 41 | 0 | 0 | logfile |
✔ | 6ZKN | 11255 | 2023-02-25 | 2020-06-30 | 2.9 | 2.40 | — | 2.6 | 0.008 | 1.03 | 0.0 | 1.04 | 11.60 | 0.01 | 2.229 | 5.03 | 0.10 | 3.5 | 96.5 | 0.0 | -2.74 | 0.65 | 0.82 | 4.06 | 2.7 | 0.008 | 1.60 | 0.0 | 0.31 | 16.48 | 0.00 | 2.084 | 11.77 | 1.98 | 3.0 | 97.0 | 0.0 | 0.60 | 1.25 | 0.66 | 0.84 | 3.21 | 65955 | 8002 | 67 | 0 | 41 | 0 | 0 | logfile |
✔ | 7V2K | 31646 | 2023-02-25 | 2021-08-09 | 2.7 | 2.78 | — | 2.8 | 0.007 | 0.90 | 9.0 | 0.05 | 15.50 | 0.01 | 1.354 | 13.49 | 0.40 | 3.7 | 96.2 | 0.1 | 1.05 | 0.77 | 0.83 | 3.21 | 2.7 | 0.003 | 0.62 | 0.0 | 0.04 | 16.96 | 0.00 | 2.054 | 8.41 | 1.70 | 3.9 | 96.0 | 0.1 | 0.99 | 0.43 | 0.79 | 0.86 | 3.01 | 66880 | 8174 | 67 | 0 | 38 | 0 | 0 | logfile |
✔ | 7W1V | 32257 | 2023-02-26 | 2021-11-20 | 3.0 | 3.04 | — | 3.0 | 0.008 | 0.81 | 1.0 | 0.04 | 18.73 | 0.01 | 2.140 | 8.26 | 1.69 | 3.1 | 96.9 | 0.0 | 1.09 | 0.78 | 0.87 | 3.16 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 17.92 | 0.00 | 2.143 | 7.73 | 2.51 | 3.4 | 96.5 | 0.0 | 1.09 | 0.29 | 0.78 | 0.87 | 3.11 | 68209 | 8270 | 67 | 0 | 46 | 0 | 0 | logfile |
✔ | 7W4M | 32308 | 2023-02-25 | 2021-11-28 | 3.3 | 3.38 | — | 3.3 | 0.007 | 0.78 | 0.0 | 0.05 | 17.29 | 0.01 | 2.052 | 9.31 | 0.43 | 4.4 | 95.6 | 0.1 | 1.06 | 0.78 | 0.85 | 2.29 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 16.99 | 0.00 | 2.080 | 8.50 | 0.58 | 4.7 | 95.3 | 0.0 | 0.96 | 0.40 | 0.78 | 0.87 | 2.27 | 66210 | 8140 | 67 | 0 | 34 | 0 | 0 | logfile |
✔ | 7W00 | 32232 | 2023-02-25 | 2021-11-17 | 3.5 | 3.66 | — | 3.6 | 0.006 | 0.78 | 0.0 | 0.04 | 18.05 | 0.01 | 2.199 | 8.77 | 0.37 | 3.8 | 96.2 | 0.0 | 1.04 | 0.78 | 0.87 | 2.25 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 17.17 | 0.00 | 2.156 | 8.34 | 0.28 | 3.9 | 96.1 | 0.0 | 1.17 | 0.26 | 0.78 | 0.87 | 2.18 | 66775 | 8140 | 67 | 0 | 39 | 0 | 0 | logfile |