The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6Fo0 | 4286 | 2023-12-09 | 2018-02-05 | 4.1 | 4.16 | 2.43 | 4.1 | 0.012 | 0.96 | 0.0 | 0.05 | 9.17 | 0.01 | 2.040 | 5.54 | 0.00 | 10.2 | 89.8 | 0.1 | -4.55 | 0.72 | 0.79 | — | 4.1 | 0.003 | 0.60 | 0.0 | 0.04 | 12.51 | 0.00 | 1.922 | 9.99 | 0.00 | 6.1 | 93.9 | 0.0 | -0.97 | 2.42 | 0.74 | 0.81 | — | 61356 | 3910 | 24 | 0 | 8 | 0 | 30362 | logfile |
✔ | 7RFG | 24441 | 2023-12-09 | 2021-07-14 | 2.6 | 2.42 | — | 2.4 | 0.013 | 2.03 | 27.0 | 0.11 | 19.28 | 0.02 | 2.518 | 1.16 | 1.84 | 4.2 | 95.6 | 0.2 | -0.50 | 0.62 | 0.80 | 5.41 | 2.4 | 0.005 | 0.69 | 0.0 | 0.06 | 19.66 | 0.01 | 1.890 | 6.62 | 1.47 | 3.1 | 96.9 | 0.0 | 0.04 | 1.64 | 0.65 | 0.83 | 4.82 | 60824 | 3928 | 16 | 0 | 32 | 0 | 30240 | logfile |
✔ | 5FN1 | 3236 | 2023-12-09 | 2015-11-10 | 3.9 | 4.00 | — | 4.7 | 0.009 | 1.18 | 0.0 | 0.07 | 11.47 | 0.00 | 0.877 | 53.81 | 0.00 | 8.8 | 88.4 | 2.8 | -3.37 | 0.24 | 0.29 | 0.57 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 16.64 | 0.01 | 1.872 | 19.75 | 0.99 | 11.5 | 87.4 | 1.2 | -0.95 | 2.11 | 0.40 | 0.73 | 1.08 | 61308 | 3906 | 36 | 90 | 0 | 0 | 30078 | logfile |
✔ | 8DY7 | 27777 | 2023-12-09 | 2022-08-03 | 3.18 | 3.44 | 3.26 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.41 | 0.00 | 1.507 | 3.64 | 0.00 | 4.3 | 95.7 | 0.0 | 0.22 | 0.71 | 0.81 | 2.62 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 18.28 | 0.00 | 1.956 | 4.95 | 0.07 | 4.5 | 95.5 | 0.0 | 0.41 | 0.29 | 0.73 | 0.83 | 2.38 | 61085 | 3612 | 14 | 149 | 5 | 0 | 29915 | logfile |
✘ | 7RGM | 24452 | 2023-12-08 | 2021-07-15 | 2.8 | 2.86 | — | 2.9 | 0.014 | 1.70 | 0.0 | 0.08 | 17.17 | 0.01 | 2.328 | 1.94 | 3.63 | 5.2 | 94.6 | 0.3 | -1.77 | 0.62 | 0.86 | 3.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 59928 | 3872 | 16 | 0 | 32 | 0 | 29736 | logfile |
✔ | 8B0F | 15779 | 2023-12-08 | 2022-09-07 | 3.0 | 3.33 | 3.08 | 3.1 | 0.004 | 0.75 | 0.0 | 0.05 | 14.59 | 0.01 | 2.067 | 4.43 | 1.40 | 7.8 | 92.2 | 0.0 | -1.39 | 0.81 | 0.81 | 3.23 | 3.1 | 0.007 | 0.68 | 0.0 | 0.04 | 14.93 | 0.00 | 1.954 | 6.54 | 0.82 | 5.2 | 94.8 | 0.0 | -0.20 | 1.37 | 0.81 | 0.82 | 3.00 | 60654 | 3910 | 12 | 0 | 9 | 0 | 29718 | logfile |
✔ | 7L2Z | 23146 | 2023-12-08 | 2020-12-17 | 3.4 | 3.78 | — | 3.7 | 0.002 | 0.50 | 1.0 | 0.05 | 12.49 | 0.00 | 1.866 | 2.68 | 0.63 | 3.6 | 96.4 | 0.0 | -2.91 | 0.74 | 0.75 | 1.52 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 13.91 | 0.00 | 1.864 | 6.21 | 0.24 | 5.6 | 94.4 | 0.0 | -1.07 | 0.77 | 0.77 | 0.82 | 2.07 | 59631 | 3866 | 6 | 0 | 0 | 0 | 29676 | logfile |
✔ | 7RGQ | 24454 | 2023-12-08 | 2021-07-15 | 3.9 | 3.65 | — | 3.7 | 0.013 | 1.98 | 9.0 | 0.09 | 19.50 | 0.01 | 2.357 | 2.12 | 2.74 | 6.9 | 92.4 | 0.7 | -1.98 | 0.56 | 0.81 | 3.07 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 18.46 | 0.00 | 1.970 | 11.91 | 0.32 | 6.0 | 94.0 | 0.0 | -1.17 | 1.77 | 0.55 | 0.81 | 2.30 | 59832 | 3848 | 16 | 0 | 40 | 0 | 29544 | logfile |
✔ | 7RFE | 24439 | 2023-12-08 | 2021-07-14 | 2.6 | 2.27 | — | 2.5 | 0.013 | 2.07 | 13.0 | 0.10 | 20.13 | 0.02 | 2.500 | 1.13 | 2.87 | 3.5 | 96.2 | 0.2 | -0.73 | 0.60 | 0.78 | 5.31 | 2.5 | 0.005 | 0.67 | 0.0 | 0.04 | 18.56 | 0.00 | 1.878 | 6.39 | 1.53 | 3.0 | 97.0 | 0.0 | 0.89 | 0.77 | 0.63 | 0.82 | 4.40 | 58720 | 3800 | 16 | 0 | 32 | 0 | 29200 | logfile |
✔ | 6PMi | 20394 | 2023-12-08 | 2019-07-02 | 3.86 | 4.66 | — | 4.1 | 0.012 | 1.26 | 0.0 | 0.06 | 16.10 | 0.01 | 1.949 | 12.35 | 0.24 | 10.7 | 88.9 | 0.4 | -4.48 | 0.69 | 0.51 | 0.20 | 4.1 | 0.005 | 0.75 | 0.0 | 0.04 | 17.49 | 0.00 | 1.816 | 25.71 | 0.61 | 11.1 | 88.7 | 0.1 | -2.74 | 1.01 | 0.86 | 0.78 | 0.35 | 57985 | 3453 | 10 | 110 | 4 | 0 | 28610 | logfile |
✔ | 6PMJ | 20395 | 2023-12-08 | 2019-07-02 | 3.91 | 5.34 | — | 4.4 | 0.011 | 1.21 | 0.0 | 0.06 | 16.10 | 0.01 | 2.011 | 11.04 | 0.31 | 10.4 | 89.3 | 0.3 | -4.41 | 0.67 | 0.43 | 0.20 | 4.4 | 0.003 | 0.69 | 0.0 | 0.04 | 17.61 | 0.00 | 1.828 | 19.05 | 0.27 | 7.6 | 92.3 | 0.1 | -1.97 | 1.65 | 0.89 | 0.77 | 0.28 | 57984 | 3453 | 10 | 110 | 4 | 0 | 28609 | logfile |
✔ | 8ET3 | 28585 | 2023-12-08 | 2022-10-16 | 3.7 | 4.31 | 3.57 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 12.77 | 0.00 | 2.082 | 2.30 | 0.00 | 0.3 | 99.7 | 0.0 | -0.04 | 0.86 | 0.78 | 2.35 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 14.14 | 0.00 | 1.941 | 6.43 | 0.13 | 3.1 | 96.9 | 0.0 | 1.22 | 0.69 | 0.86 | 0.80 | 2.22 | 56854 | 3639 | 22 | 0 | 6 | 0 | 28542 | logfile |
✔ | 6XZQ | 10665 | 2023-12-08 | 2020-02-05 | 3.6 | 4.18 | 3.53 | 3.7 | 0.005 | 0.64 | 0.0 | 0.04 | 15.87 | 0.01 | 1.924 | 5.93 | 1.26 | 5.0 | 95.0 | 0.0 | -2.44 | 0.89 | 0.79 | 1.95 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 1.948 | 8.76 | 0.10 | 4.7 | 95.3 | 0.0 | -0.27 | 0.77 | 0.90 | 0.82 | 1.89 | 56888 | 3492 | 8 | 19 | 0 | 0 | 28480 | logfile |
✔ | 7M05 | 23609 | 2023-12-08 | 2021-03-10 | 2.39 | 2.66 | 2.49 | 2.6 | 0.013 | 0.89 | 0.0 | 0.06 | 14.64 | 0.01 | 2.064 | 3.66 | 0.50 | 6.9 | 92.3 | 0.8 | -3.01 | 0.75 | 0.81 | 4.52 | 2.6 | 0.003 | 0.56 | 0.0 | 0.05 | 16.20 | 0.00 | 2.060 | 2.94 | 0.91 | 2.5 | 97.4 | 0.1 | 0.55 | 1.28 | 0.79 | 0.84 | 3.90 | 57152 | 3636 | 12 | 0 | 4 | 0 | 28188 | logfile |
✔ | 6E9Y | 9020 | 2023-12-07 | 2018-08-01 | 4.3 | 4.50 | — | 4.3 | 0.008 | 0.73 | 0.0 | 0.04 | 7.51 | 0.00 | 1.433 | 25.35 | 0.00 | 3.1 | 96.9 | 0.0 | -3.58 | 0.75 | 0.80 | — | 4.3 | 0.003 | 0.50 | 0.0 | 0.03 | 10.98 | 0.00 | 2.058 | 9.04 | 0.00 | 1.1 | 98.9 | 0.0 | 2.75 | 1.49 | 0.76 | 0.82 | — | 54450 | 3405 | 15 | 0 | 0 | 0 | 28155 | logfile |
✔ | 6Yo0 | 10862 | 2023-12-08 | 2020-04-14 | 2.9 | 3.37 | 2.94 | 3.1 | 0.009 | 0.75 | 0.0 | 0.04 | 9.97 | 0.00 | 1.889 | 11.21 | 0.27 | 3.7 | 96.3 | 0.0 | -0.60 | 0.84 | 0.87 | 3.83 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 13.60 | 0.00 | 1.736 | 8.24 | 0.60 | 4.3 | 95.7 | 0.0 | 1.20 | 0.80 | 0.84 | 0.89 | 3.17 | 55780 | 3598 | 17 | 0 | 10 | 0 | 28102 | logfile |
✔ | 7RJA | 24482 | 2023-12-08 | 2021-07-20 | 3.0 | 3.57 | — | 3.5 | 0.006 | 0.65 | 0.0 | 0.04 | 13.44 | 0.00 | 1.839 | 9.54 | 0.07 | 4.1 | 95.9 | 0.0 | 0.19 | 0.65 | 0.78 | 3.99 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 15.41 | 0.00 | 1.946 | 9.54 | 1.11 | 4.1 | 95.9 | 0.0 | 0.95 | 1.14 | 0.64 | 0.79 | 3.45 | 57452 | 3812 | 24 | 0 | 12 | 0 | 28034 | logfile |
✔ | 8CXN | 27061 | 2023-12-08 | 2022-05-22 | 2.9 | 3.69 | 2.99 | 3.3 | 0.002 | 0.50 | 3.0 | 0.05 | 11.48 | 0.00 | 1.974 | 5.44 | 0.06 | 3.5 | 96.4 | 0.1 | 0.27 | 0.78 | 0.71 | 1.63 | 3.4 | 0.003 | 0.54 | 3.0 | 0.04 | 12.56 | 0.00 | 1.850 | 10.12 | 0.56 | 5.7 | 94.2 | 0.1 | -0.84 | 0.46 | 0.79 | 0.74 | 1.65 | 57131 | 3678 | 9 | 0 | 30 | 0 | 27987 | logfile |
✔ | 8CYA | 27072 | 2023-12-08 | 2022-05-23 | 2.7 | 3.50 | 2.73 | 3.0 | 0.003 | 0.56 | 0.0 | 0.05 | 13.56 | 0.00 | 1.935 | 6.76 | 0.06 | 4.8 | 95.0 | 0.2 | 0.52 | 0.83 | 0.75 | 1.85 | 3.1 | 0.004 | 0.53 | 0.0 | 0.04 | 12.82 | 0.00 | 2.004 | 10.34 | 0.53 | 5.2 | 94.6 | 0.2 | 0.07 | 0.40 | 0.85 | 0.79 | 2.15 | 57833 | 3681 | 29 | 0 | 88 | 0 | 27935 | logfile |
✘ | 7RJE | 24486 | 2023-12-08 | 2021-07-20 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57232 | 3818 | 24 | 0 | 10 | 0 | 27924 | logfile |