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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CST | 26970 | 2023-12-10 | 2022-05-13 | 2.85 | 2.57 | 2.87 | 2.7 | 0.005 | 0.67 | 0.0 | 0.39 | 19.05 | 0.01 | 1.938 | 2.58 | 0.00 | 1.4 | 98.6 | 0.0 | 1.18 | 0.69 | 0.78 | 3.45 | 2.7 | 0.005 | 0.80 | 0.0 | 0.12 | 19.55 | 0.00 | 1.885 | 6.34 | 1.48 | 1.8 | 98.1 | 0.0 | 1.62 | 1.56 | 0.70 | 0.80 | 3.05 | 66351 | 5810 | 39 | 889 | 41 | 0 | 0 | logfile |
✔ | 6C4H | 7340 | 2023-12-10 | 2018-01-12 | 3.1 | 3.33 | — | 3.3 | 0.011 | 1.20 | 1.0 | 0.11 | 24.33 | 0.05 | 1.913 | 7.67 | 6.80 | 5.3 | 94.7 | 0.0 | -2.61 | 0.43 | 0.85 | 3.61 | 3.3 | 0.008 | 0.92 | 0.0 | 0.04 | 23.21 | 0.01 | 1.815 | 7.67 | 0.00 | 6.4 | 93.6 | 0.0 | -2.37 | 0.39 | 0.39 | 0.85 | 4.96 | 15326 | 184 | 8 | 648 | 34 | 0 | 0 | logfile |
✔ | 6V7B | 21094 | 2023-12-08 | 2019-12-08 | 3.4 | 3.51 | — | 3.4 | 0.008 | 0.84 | 0.0 | 0.05 | 18.33 | 0.01 | 2.234 | 4.03 | 0.11 | 3.1 | 96.9 | 0.0 | -6.34 | 0.58 | 0.88 | 2.82 | 3.4 | 0.006 | 0.71 | 0.0 | 0.04 | 18.76 | 0.00 | 1.993 | 11.25 | 0.73 | 4.0 | 96.0 | 0.0 | 1.26 | 0.64 | 0.58 | 0.89 | 2.16 | 58277 | 5635 | 48 | 646 | 0 | 0 | 0 | logfile |
✘ | 5ZWM | 6972 | 2023-12-08 | 2018-05-16 | 3.4 | 3.37 | — | 3.3 | 0.007 | 1.15 | 10.0 | 0.06 | 14.46 | 0.01 | 1.786 | 18.95 | 0.72 | 5.9 | 93.5 | 0.6 | -3.22 | 0.51 | 0.43 | 1.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111041 | 12858 | 61 | 634 | 8 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2023-12-10 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 21.31 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.00 | 0.0 | 0.05 | 27.65 | 0.01 | 1.932 | 71.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.94 | 0.89 | 0.79 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2023-12-10 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 26.14 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.1 | 0.009 | 0.93 | 0.0 | 0.05 | 27.39 | 0.01 | 1.952 | 40.07 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.55 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 6WQ0 | 21867 | 2023-12-08 | 2020-04-28 | 2.8 | 2.89 | — | 2.9 | 0.007 | 0.71 | 0.0 | 0.04 | 15.92 | 0.01 | 2.210 | 4.29 | 0.00 | 1.6 | 98.4 | 0.0 | -0.40 | 0.60 | 0.90 | 4.25 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 16.56 | 0.00 | 2.262 | 4.37 | 0.93 | 0.8 | 99.2 | 0.0 | 3.08 | 1.55 | 0.59 | 0.90 | 3.77 | 57467 | 6026 | 48 | 602 | 0 | 0 | 0 | logfile |
✔ | 7UiN | 26550 | 2023-12-10 | 2022-03-29 | 2.8 | 2.99 | 2.83 | 3.0 | 0.010 | 1.21 | 1.0 | 0.05 | 24.95 | 0.01 | 1.477 | 4.43 | 2.93 | 3.7 | 95.8 | 0.5 | -1.14 | 0.71 | 0.80 | 2.44 | 3.0 | 0.007 | 0.78 | 0.0 | 0.04 | 24.67 | 0.01 | 1.718 | 12.34 | 3.23 | 3.9 | 95.5 | 0.5 | 0.16 | 0.93 | 0.73 | 0.85 | 2.69 | 15585 | 387 | 5 | 578 | 30 | 24 | 0 | logfile |
✔ | 8T2R | 40985 | 2023-12-10 | 2023-06-06 | 3.1 | 3.34 | 3.14 | 3.3 | 0.006 | 0.96 | 0.0 | 0.05 | 24.25 | 0.01 | 2.174 | 4.24 | 1.15 | 3.1 | 96.3 | 0.5 | -2.13 | 0.68 | 0.83 | 2.96 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 23.90 | 0.00 | 2.077 | 11.32 | 1.15 | 4.5 | 95.0 | 0.5 | 0.65 | 0.36 | 0.75 | 0.86 | 2.95 | 15063 | 388 | 4 | 552 | 15 | 0 | 0 | logfile |
✔ | 6ND4 | 0441 | 2023-12-09 | 2018-12-13 | 4.3 | 4.41 | — | 4.2 | 0.010 | 1.03 | 0.0 | 0.06 | 18.28 | 0.02 | 2.230 | 5.19 | 0.00 | 6.4 | 93.6 | 0.1 | -3.63 | 0.80 | 0.66 | — | 4.2 | 0.005 | 0.99 | 0.0 | 0.05 | 18.03 | 0.01 | 1.963 | 16.67 | 0.00 | 15.1 | 84.8 | 0.0 | -3.06 | 1.07 | 0.84 | 0.77 | — | 63993 | 9225 | 30 | 551 | 1306 | 0 | 0 | logfile |
✔ | 7B9V | 12106 | 2023-12-08 | 2020-12-14 | 2.8 | 2.94 | — | 2.9 | 0.010 | 1.40 | 6.0 | 0.10 | 16.14 | 0.01 | 1.604 | 0.26 | 0.17 | 2.5 | 97.4 | 0.1 | -0.42 | 0.51 | 0.65 | 2.27 | 2.9 | 0.003 | 0.70 | 0.0 | 0.04 | 17.98 | 0.00 | 1.878 | 10.38 | 2.26 | 2.5 | 97.5 | 0.0 | 1.03 | 0.72 | 0.57 | 0.71 | 1.78 | 109105 | 12183 | 58 | 545 | 150 | 0 | 0 | logfile |
✔ | 8UH4 | 42246 | 2023-12-08 | 2023-10-06 | 3.72 | 4.54 | 4.34 | 4.4 | 0.008 | 0.78 | 0.0 | 0.05 | 15.20 | 0.01 | 2.146 | 13.85 | 0.00 | 2.4 | 97.2 | 0.5 | -2.44 | 0.80 | 0.84 | 3.98 | 4.4 | 0.006 | 0.81 | 0.0 | 0.04 | 18.31 | 0.00 | 2.047 | 15.50 | 0.94 | 4.7 | 95.3 | 0.0 | -1.53 | 0.69 | 0.76 | 0.79 | 3.20 | 110100 | 12780 | 120 | 540 | 0 | 0 | 0 | logfile |
✔ | 6oBJ | 20015 | 2023-12-09 | 2019-03-20 | 3.5 | 3.71 | 3.65 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 19.63 | 0.01 | 1.646 | 8.47 | 1.42 | 9.5 | 90.5 | 0.0 | -5.00 | 0.64 | 0.71 | 0.81 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 21.41 | 0.00 | 2.093 | 11.60 | 0.21 | 8.3 | 91.7 | 0.0 | -1.23 | 0.99 | 0.69 | 0.82 | 1.36 | 64060 | 6760 | 60 | 520 | 20 | 0 | 0 | logfile |
✘ | 5W7G | 8780 | 2023-12-07 | 2017-06-19 | 4.5 | 4.20 | — | 4.2 | 0.015 | 1.17 | 0.0 | 0.07 | 16.66 | 0.01 | 2.165 | 7.63 | 0.45 | 1.2 | 98.8 | 0.0 | -0.31 | 0.50 | 0.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53508 | 5397 | 44 | 504 | 0 | 0 | 0 | logfile |
✔ | 8EA4 | 27972 | 2023-12-08 | 2022-08-27 | 3.0 | 4.51 | 3.88 | 3.9 | 0.013 | 1.63 | 12.0 | 0.08 | 18.56 | 0.02 | 1.131 | 13.81 | 0.21 | 2.3 | 97.7 | 0.0 | -1.13 | 0.76 | 0.60 | 1.23 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 19.71 | 0.00 | 1.936 | 11.31 | 1.31 | 2.2 | 97.8 | 0.0 | 1.53 | 1.44 | 0.89 | 0.83 | 0.97 | 58049 | 5875 | 46 | 495 | 28 | 0 | 0 | logfile |
✔ | 8EA3 | 27971 | 2023-12-08 | 2022-08-27 | 3.7 | 3.91 | 3.69 | 3.8 | 0.013 | 1.65 | 12.0 | 0.09 | 18.56 | 0.02 | 1.162 | 11.38 | 0.29 | 2.4 | 97.4 | 0.2 | -1.04 | 0.75 | 0.70 | 2.00 | 3.8 | 0.004 | 0.62 | 0.0 | 0.04 | 20.12 | 0.00 | 1.862 | 9.49 | 0.33 | 2.9 | 97.0 | 0.0 | 1.32 | 1.79 | 0.82 | 0.83 | 1.38 | 55955 | 5618 | 44 | 495 | 26 | 0 | 0 | logfile |
✔ | 6G90 | 4364 | 2023-12-09 | 2018-04-10 | 4.0 | 4.12 | — | 3.9 | 0.009 | 1.30 | 2.0 | 0.07 | 15.40 | 0.03 | 1.687 | 19.01 | 0.57 | 7.8 | 91.4 | 0.8 | -3.55 | 0.51 | 0.41 | — | 3.9 | 0.005 | 0.93 | 0.0 | 0.04 | 17.36 | 0.01 | 2.058 | 19.48 | 0.50 | 7.8 | 91.9 | 0.3 | -1.01 | 3.85 | 0.58 | 0.57 | — | 65050 | 6796 | 43 | 474 | 223 | 0 | 0 | logfile |
✔ | 8C6J | 16452 | 2023-12-08 | 2023-01-12 | 2.8 | 3.35 | 2.78 | 2.6 | 0.003 | 0.52 | 1.0 | 0.04 | 14.89 | 0.00 | 1.589 | 7.77 | 0.06 | 2.6 | 97.4 | 0.0 | 1.31 | 0.69 | 0.71 | 3.35 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 15.47 | 0.00 | 1.930 | 8.23 | 1.01 | 3.3 | 96.7 | 0.0 | 2.06 | 0.34 | 0.75 | 0.81 | 3.11 | 111233 | 16794 | 69 | 460 | 18 | 0 | 0 | logfile |
✔ | 7XD6 | 33137 | 2023-12-09 | 2022-03-26 | 2.84 | 3.25 | 2.83 | 3.0 | 0.005 | 0.74 | 0.0 | 0.04 | 22.69 | 0.00 | 1.975 | 1.30 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.005 | 0.67 | 0.0 | 0.04 | 22.81 | 0.00 | 1.877 | 7.89 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.32 | 0.88 | 0.89 | — | 9843 | 0 | 3 | 459 | 29 | 0 | 0 | logfile |
✔ | 5LJ3 | 4055 | 2023-12-09 | 2016-07-17 | 3.8 | 3.92 | — | 3.8 | 0.007 | 1.46 | 40.0 | 0.09 | 19.06 | 0.01 | 1.631 | 5.99 | 8.54 | 8.1 | 90.7 | 1.2 | -1.69 | 0.70 | 0.81 | 1.37 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 18.72 | 0.00 | 2.035 | 15.06 | 0.38 | 4.6 | 95.2 | 0.2 | 0.36 | 0.86 | 0.69 | 0.78 | 1.40 | 63161 | 7305 | 45 | 458 | 142 | 0 | 0 | logfile |