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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6AZ3 | 7025 | 2023-04-26 | 2017-09-09 | 2.5 | 3.08 | — | 3.1 | 0.012 | 1.29 | 0.0 | 0.06 | 16.54 | 0.03 | 1.349 | 4.53 | 0.96 | 6.4 | 93.4 | 0.2 | -4.53 | 0.54 | 0.78 | 5.15 | 3.1 | 0.006 | 0.88 | 0.0 | 0.04 | 17.29 | 0.01 | 1.945 | 8.72 | 3.08 | 6.3 | 93.6 | 0.1 | -1.41 | 0.34 | 0.54 | 0.80 | 3.89 | 126561 | 6390 | 91 | 3507 | 44 | 1019 | 0 | logfile |
✔ | 6ZGL | 11210 | 2023-04-23 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✘ | 8DBX | 27316 | 2023-04-24 | 2022-06-14 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16968 | 1998 | 12 | 0 | 10 | 914 | 0 | logfile |
✔ | 7R44 | 14266 | 2023-04-25 | 2022-02-08 | 2.4 | 2.43 | — | 2.4 | 0.008 | 0.81 | 0.0 | 0.84 | 15.16 | 0.00 | 1.908 | 3.31 | 0.00 | 2.5 | 97.5 | 0.0 | 0.40 | 0.70 | 0.90 | 6.05 | 2.5 | 0.007 | 1.30 | 0.0 | 0.25 | 16.34 | 0.00 | 1.997 | 4.87 | 0.60 | 1.6 | 98.4 | 0.0 | 1.68 | 0.32 | 0.70 | 0.90 | 5.12 | 68213 | 8163 | 113 | 0 | 50 | 905 | 0 | logfile |
✔ | 7R43 | 14261 | 2023-04-25 | 2022-02-08 | 2.4 | 2.41 | — | 2.5 | 0.007 | 0.79 | 0.0 | 0.84 | 15.03 | 0.00 | 1.899 | 3.40 | 0.01 | 2.5 | 97.4 | 0.0 | 0.39 | 0.69 | 0.89 | 5.73 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.38 | 0.00 | 1.204 | 4.60 | 0.56 | 1.6 | 98.4 | 0.0 | 1.60 | 0.31 | 0.69 | 0.90 | 4.85 | 68334 | 8188 | 109 | 0 | 47 | 885 | 0 | logfile |
✔ | 7R46 | 14277 | 2023-04-24 | 2022-02-08 | 2.4 | 2.44 | — | 2.5 | 0.008 | 0.81 | 0.0 | 0.85 | 15.41 | 0.01 | 1.964 | 3.47 | 0.01 | 2.9 | 97.1 | 0.0 | 0.30 | 0.70 | 0.90 | 5.72 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.54 | 0.00 | 2.203 | 5.23 | 0.51 | 1.8 | 98.2 | 0.0 | 1.76 | 0.35 | 0.70 | 0.90 | 4.84 | 67614 | 8100 | 113 | 0 | 51 | 859 | 0 | logfile |
✘ | 8ENN | 28274 | 2023-04-24 | 2022-09-30 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16749 | 1974 | 12 | 0 | 9 | 858 | 0 | logfile |
✔ | 7R4G | 14307 | 2023-04-23 | 2022-02-08 | 2.5 | 2.48 | — | 2.5 | 0.008 | 0.81 | 0.0 | 0.86 | 15.25 | 0.01 | 1.869 | 4.23 | 0.03 | 3.2 | 96.8 | 0.0 | -0.01 | 0.70 | 0.89 | 5.55 | 2.5 | 0.007 | 1.34 | 0.0 | 0.26 | 16.56 | 0.00 | 2.142 | 5.07 | 0.94 | 2.3 | 97.7 | 0.0 | 1.33 | 0.79 | 0.70 | 0.90 | 4.69 | 65153 | 7802 | 111 | 0 | 47 | 851 | 0 | logfile |
✔ | 7XMU | 33305 | 2023-04-23 | 2022-04-26 | 2.3 | 2.51 | 2.33 | 2.5 | 0.016 | 0.90 | 0.0 | 0.05 | 17.56 | 0.04 | 1.897 | 4.23 | 1.57 | 2.6 | 97.4 | 0.0 | -0.10 | 0.75 | 0.87 | 4.86 | 2.5 | 0.003 | 1.81 | 0.0 | 0.04 | 17.21 | 0.00 | 1.872 | 4.69 | 0.46 | 2.6 | 97.4 | 0.0 | 0.29 | 1.11 | 0.77 | 0.88 | 4.57 | 15294 | 1842 | 18 | 0 | 36 | 822 | 0 | logfile |
✔ | 7XMV | 33306 | 2023-04-23 | 2022-04-27 | 2.6 | 2.75 | 2.70 | 2.8 | 0.014 | 0.89 | 0.0 | 0.05 | 15.79 | 0.03 | 1.853 | 5.35 | 1.18 | 3.6 | 96.4 | 0.0 | -0.87 | 0.72 | 0.86 | 4.88 | 2.8 | 0.004 | 1.24 | 0.0 | 0.05 | 17.46 | 0.00 | 1.861 | 4.67 | 0.85 | 3.3 | 96.7 | 0.0 | -0.01 | 1.13 | 0.74 | 0.87 | 4.48 | 15228 | 1842 | 18 | 0 | 30 | 810 | 0 | logfile |
✘ | 7VB7 | 31874 | 2023-04-29 | 2021-08-30 | 2.4 | 2.41 | — | 2.4 | 0.007 | 0.77 | 1.0 | 0.05 | 16.42 | 0.01 | 1.988 | 6.35 | 1.28 | 3.0 | 96.9 | 0.1 | 0.48 | 0.76 | 0.90 | 5.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29279 | 3543 | 45 | 0 | 19 | 736 | 0 | logfile |
✔ | 7VYN | 32210 | 2023-04-29 | 2021-11-14 | 2.4 | 2.47 | — | 2.5 | 0.008 | 0.78 | 1.0 | 0.05 | 16.97 | 0.01 | 2.198 | 5.50 | 1.15 | 3.5 | 96.5 | 0.1 | 0.41 | 0.77 | 0.91 | 5.04 | 2.4 | 0.003 | 0.57 | 0.0 | 0.04 | 17.05 | 0.00 | 2.157 | 4.55 | 1.68 | 3.5 | 96.5 | 0.1 | 0.59 | 0.60 | 0.76 | 0.92 | 5.01 | 29298 | 3543 | 45 | 0 | 20 | 735 | 0 | logfile |
✔ | 7VBZ | 31886 | 2023-04-29 | 2021-09-01 | 2.4 | 2.48 | — | 2.5 | 0.009 | 0.93 | 6.0 | 0.06 | 16.44 | 0.01 | 1.907 | 11.30 | 2.07 | 3.7 | 96.0 | 0.3 | -0.05 | 0.74 | 0.89 | 4.87 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 17.07 | 0.00 | 2.104 | 5.66 | 1.64 | 3.0 | 96.9 | 0.1 | 0.42 | 0.90 | 0.75 | 0.91 | 5.12 | 29292 | 3543 | 45 | 0 | 19 | 730 | 0 | logfile |
✘ | 7Pi5 | 13430 | 2023-04-28 | 2021-08-19 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 76287 | 7455 | 123 | 0 | 343 | 718 | 0 | logfile |
✔ | 7VBN | 31883 | 2023-04-28 | 2021-08-31 | 2.4 | 2.48 | — | 2.5 | 0.006 | 0.75 | 2.0 | 0.05 | 16.47 | 0.01 | 2.002 | 8.61 | 1.39 | 3.1 | 96.8 | 0.1 | 0.39 | 0.78 | 0.89 | 4.54 | 2.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.95 | 0.00 | 2.109 | 5.90 | 2.12 | 3.2 | 96.7 | 0.1 | 0.33 | 0.81 | 0.78 | 0.91 | 4.61 | 29042 | 3522 | 44 | 0 | 17 | 713 | 0 | logfile |
✔ | 7VZ1 | 32218 | 2023-04-28 | 2021-11-15 | 2.5 | 2.55 | — | 2.5 | 0.008 | 0.78 | 0.0 | 0.05 | 17.15 | 0.01 | 2.201 | 6.34 | 1.17 | 3.3 | 96.6 | 0.1 | 0.11 | 0.79 | 0.91 | 4.60 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 17.22 | 0.00 | 2.155 | 5.08 | 1.84 | 3.4 | 96.6 | 0.0 | 0.37 | 0.25 | 0.78 | 0.92 | 4.45 | 28737 | 3488 | 44 | 0 | 17 | 712 | 0 | logfile |
✔ | 7VWJ | 32154 | 2023-04-28 | 2021-11-10 | 2.6 | 2.67 | — | 2.7 | 0.007 | 0.72 | 0.0 | 0.04 | 14.07 | 0.01 | 1.965 | 7.48 | 0.13 | 2.9 | 97.0 | 0.0 | 0.65 | 0.77 | 0.89 | 4.69 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 16.51 | 0.00 | 2.128 | 6.78 | 1.47 | 3.3 | 96.7 | 0.0 | 0.39 | 0.32 | 0.77 | 0.91 | 4.33 | 28748 | 3488 | 44 | 0 | 17 | 711 | 0 | logfile |
✘ | 6TRC | 10558 | 2023-04-28 | 2019-12-18 | 2.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 75591 | 6849 | 99 | 0 | 402 | 651 | 0 | logfile |
✘ | 6KMX | 0727 | 2023-04-23 | 2019-08-01 | 2.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 65112 | 5919 | 72 | 0 | 363 | 636 | 0 | logfile |
✘ | 6KMW | 0726 | 2023-04-22 | 2019-08-01 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64083 | 5739 | 63 | 0 | 366 | 627 | 0 | logfile |