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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7FGG | 31580 | 2022-12-21 | 2021-07-27 | 2.19 | 2.26 | — | 2.2 | 0.010 | 1.05 | 0.0 | 0.06 | 17.46 | 0.01 | 2.005 | 2.76 | 2.08 | 3.8 | 96.2 | 0.0 | -0.12 | 0.76 | 0.80 | 5.14 | 2.2 | 0.003 | 0.68 | 0.0 | 0.05 | 17.68 | 0.00 | 1.960 | 2.01 | 1.71 | 3.4 | 96.6 | 0.0 | 0.48 | 0.29 | 0.80 | 0.89 | 5.23 | 45132 | 5424 | 36 | 0 | 36 | 1764 | 0 | logfile |
✔ | 6SHT | 10205 | 2022-12-19 | 2019-08-08 | 2.73 | 2.88 | 2.78 | 2.8 | 0.015 | 1.55 | 0.0 | 0.07 | 17.80 | 0.01 | 0.000 | 7.75 | 5.56 | 0.6 | 98.8 | 0.6 | -2.82 | 0.81 | 0.91 | 3.74 | 2.8 | 0.005 | 0.60 | 0.0 | 0.04 | 19.58 | 0.00 | 0.000 | 4.99 | 2.24 | 1.6 | 98.1 | 0.3 | 4.81 | 1.76 | 0.72 | 0.85 | 2.07 | 37152 | 4176 | 24 | 0 | 48 | 1728 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-12-13 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.51 | 0.0 | 0.04 | 13.89 | 0.00 | 1.846 | 2.78 | 0.11 | 0.8 | 99.2 | 0.0 | 5.13 | 0.58 | 0.87 | 0.93 | 8.03 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7o71 | 12742 | 2022-12-19 | 2021-04-12 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67428 | 8041 | 102 | 0 | 49 | 1616 | 0 | logfile |
✔ | 6ZK9 | 11241 | 2022-12-16 | 2020-06-30 | 2.3 | 2.55 | — | 2.4 | 0.008 | 1.05 | 0.0 | 1.58 | 10.49 | 0.01 | 2.257 | 7.17 | 0.07 | 3.2 | 96.8 | 0.0 | -2.52 | 0.78 | 0.92 | 6.57 | 2.4 | 0.012 | 2.33 | 0.0 | 0.48 | 15.13 | 0.00 | 2.072 | 11.35 | 0.93 | 2.6 | 97.4 | 0.0 | 0.49 | 0.47 | 0.80 | 0.93 | 6.08 | 29587 | 3480 | 45 | 0 | 19 | 1472 | 0 | logfile |
✔ | 7FGH | 31581 | 2022-12-21 | 2021-07-27 | 2.18 | 2.32 | — | 2.3 | 0.009 | 1.03 | 0.0 | 0.06 | 16.15 | 0.01 | 2.118 | 1.69 | 1.31 | 3.8 | 96.2 | 0.0 | -0.25 | 0.77 | 0.80 | 5.03 | 2.3 | 0.002 | 0.54 | 0.0 | 0.04 | 16.34 | 0.00 | 2.267 | 2.06 | 0.98 | 2.2 | 97.8 | 0.0 | 0.33 | 0.91 | 0.82 | 0.89 | 4.58 | 44532 | 5448 | 36 | 12 | 12 | 1416 | 0 | logfile |
✔ | 6Z0U | 11023 | 2022-12-16 | 2020-05-11 | 2.9 | 2.99 | — | 2.9 | 0.007 | 0.73 | 0.0 | 0.05 | 13.19 | 0.01 | 2.040 | 10.20 | 0.52 | 6.5 | 93.5 | 0.0 | -3.59 | 0.78 | 0.89 | 4.49 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 15.01 | 0.00 | 2.109 | 9.11 | 0.81 | 4.2 | 95.8 | 0.0 | -0.27 | 0.37 | 0.75 | 0.86 | 3.68 | 87288 | 10896 | 72 | 0 | 24 | 1392 | 0 | logfile |
✔ | 7o6E | 12738 | 2022-12-19 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.61 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.003 | 0.46 | 0.0 | 0.03 | 18.16 | 0.00 | 2.221 | 3.78 | 0.29 | 0.5 | 99.5 | 0.0 | 4.53 | 0.29 | 0.88 | 0.89 | 5.11 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 8A5i | 15175 | 2022-12-16 | 2022-06-15 | 2.3 | 1.92 | 2.20 | 2.2 | 0.011 | 1.72 | 1.0 | 0.12 | 15.57 | 0.02 | 1.234 | 3.44 | 2.48 | 5.4 | 93.2 | 1.4 | -2.45 | 0.49 | 0.73 | 5.52 | 2.1 | 0.005 | 0.78 | 0.0 | 0.04 | 15.64 | 0.01 | 1.599 | 7.73 | 2.08 | 4.3 | 95.4 | 0.2 | -0.31 | 0.88 | 0.68 | 0.85 | 5.25 | 89799 | 2973 | 56 | 3022 | 172 | 1381 | 0 | logfile |
✔ | 7SCA | 25031 | 2022-12-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.53 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.54 | 0.0 | 0.04 | 16.62 | 0.00 | 2.126 | 8.47 | 0.98 | 0.9 | 99.1 | 0.0 | 2.90 | 1.09 | 0.79 | 0.85 | 5.23 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7Z7V | 14538 | 2022-12-20 | 2022-03-16 | 2.29 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39106 | 4748 | 37 | 0 | 28 | 1297 | 0 | logfile |
✔ | 6ZKA | 11242 | 2022-12-20 | 2020-06-30 | 2.5 | 2.55 | — | 2.5 | 0.009 | 1.02 | 0.0 | 0.16 | 12.79 | 0.01 | 2.189 | 4.76 | 0.07 | 2.5 | 97.5 | 0.0 | -2.18 | 0.74 | 0.91 | 6.10 | 2.5 | 0.003 | 0.59 | 0.0 | 0.04 | 16.07 | 0.00 | 2.132 | 9.51 | 1.23 | 2.2 | 97.8 | 0.0 | 1.73 | 1.13 | 0.75 | 0.91 | 5.10 | 40800 | 4694 | 74 | 0 | 28 | 1293 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-12-11 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.12 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.006 | 0.91 | 0.0 | 0.05 | 19.05 | 0.01 | 2.010 | 12.97 | 2.06 | 2.8 | 97.1 | 0.0 | 0.50 | 0.91 | 0.81 | 0.84 | 5.43 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7N8o | 24239 | 2022-12-11 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.96 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.62 | 0.01 | 2.011 | 12.03 | 1.57 | 2.8 | 97.2 | 0.0 | 1.10 | 0.35 | 0.75 | 0.77 | 5.40 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7JFo | 22308 | 2022-12-20 | 2020-07-17 | 2.13 | 2.12 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 12.07 | 0.01 | 2.198 | 6.82 | 1.23 | 3.9 | 96.1 | 0.0 | -0.96 | 0.72 | 0.78 | 6.96 | 2.1 | 0.003 | 0.59 | 0.0 | 0.04 | 14.54 | 0.00 | 2.211 | 7.06 | 1.03 | 2.2 | 97.8 | 0.0 | 1.32 | 0.79 | 0.70 | 0.81 | 5.75 | 38958 | 4832 | 40 | 0 | 0 | 1198 | 0 | logfile |
✔ | 7Z7S | 14536 | 2022-12-20 | 2022-03-16 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39208 | 4774 | 37 | 0 | 31 | 1184 | 0 | logfile |
✔ | 6QSU | 4629 | 2022-12-15 | 2019-02-22 | 2.4 | 2.64 | 2.56 | 2.6 | 0.006 | 0.65 | 0.0 | 0.05 | 13.44 | 0.00 | 1.918 | 4.91 | 0.61 | 4.6 | 95.4 | 0.0 | 0.27 | 0.81 | 0.87 | 4.68 | 2.6 | 0.003 | 0.56 | 0.0 | 0.05 | 16.46 | 0.00 | 1.934 | 5.89 | 0.83 | 3.5 | 96.5 | 0.0 | 0.34 | 1.15 | 0.72 | 0.86 | 4.25 | 75758 | 9684 | 60 | 0 | 36 | 1178 | 0 | logfile |
✔ | 7JSX | 22462 | 2022-12-20 | 2020-08-16 | 2.06 | 2.05 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 11.97 | 0.01 | 2.201 | 6.88 | 1.26 | 3.9 | 96.1 | 0.0 | -1.03 | 0.74 | 0.76 | 5.10 | 2.0 | 0.004 | 0.67 | 0.0 | 0.04 | 14.34 | 0.00 | 2.160 | 8.36 | 0.80 | 2.3 | 97.7 | 0.0 | 0.95 | 0.64 | 0.83 | 0.90 | 6.36 | 38813 | 4832 | 40 | 0 | 0 | 1141 | 0 | logfile |
✔ | 7P8W | 13256 | 2022-12-13 | 2021-07-23 | 2.2 | 2.34 | — | 2.3 | 0.014 | 1.79 | 4.0 | 0.09 | 14.82 | 0.01 | 2.340 | 2.04 | 0.75 | 3.8 | 96.0 | 0.2 | -1.36 | 0.85 | 0.92 | 6.91 | 2.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.61 | 0.00 | 2.221 | 3.56 | 0.46 | 2.9 | 97.1 | 0.0 | 0.56 | 1.15 | 0.85 | 0.91 | 6.13 | 17668 | 2008 | 12 | 0 | 8 | 1110 | 0 | logfile |
✔ | 7QSN | 14139 | 2022-12-14 | 2022-01-13 | 2.81 | 2.74 | 2.82 | 2.7 | 0.008 | 0.92 | 0.0 | 0.85 | 15.14 | 0.00 | 1.853 | 4.76 | 0.01 | 3.3 | 96.7 | 0.0 | -0.45 | 0.77 | 0.87 | 4.68 | 2.7 | 0.007 | 1.31 | 0.0 | 0.25 | 16.33 | 0.00 | 2.035 | 7.33 | 1.12 | 2.2 | 97.8 | 0.0 | 1.37 | 1.17 | 0.77 | 0.88 | 3.98 | 69319 | 8201 | 116 | 0 | 59 | 1096 | 0 | logfile |