Table showing results for December 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7FGG	31580	2022-12-21	2021-07-27	2.19	2.26	—	2.2	0.010	1.05	0.0	0.06	17.46	0.01	2.005	2.76	2.08	3.8	96.2	0.0	-0.12	0.76	0.80	5.14	2.2	0.003	0.68	0.0	0.05	17.68	0.00	1.960	2.01	1.71	3.4	96.6	0.0	0.48	0.29	0.80	0.89	5.23	45132	5424	36	0	36	1764	0	logfile
✔	6SHT	10205	2022-12-19	2019-08-08	2.73	2.88	2.78	2.8	0.015	1.55	0.0	0.07	17.80	0.01	0.000	7.75	5.56	0.6	98.8	0.6	-2.82	0.81	0.91	3.74	2.8	0.005	0.60	0.0	0.04	19.58	0.00	0.000	4.99	2.24	1.6	98.1	0.3	4.81	1.76	0.72	0.85	2.07	37152	4176	24	0	48	1728	0	logfile
✔	7KoD	22972	2022-12-13	2020-11-08	1.655	2.30	—	1.9	0.001	0.33	0.0	0.03	8.49	0.00	2.288	0.80	0.00	1.1	98.9	0.0	6.14	0.91	0.91	8.16	2.0	0.005	0.51	0.0	0.04	13.89	0.00	1.846	2.78	0.11	0.8	99.2	0.0	5.13	0.58	0.87	0.93	8.03	68186	4128	48	0	0	1727	32643	logfile
✔	7o71	12742	2022-12-19	2021-04-12	2.4	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	67428	8041	102	0	49	1616	0	logfile
✔	6ZK9	11241	2022-12-16	2020-06-30	2.3	2.55	—	2.4	0.008	1.05	0.0	1.58	10.49	0.01	2.257	7.17	0.07	3.2	96.8	0.0	-2.52	0.78	0.92	6.57	2.4	0.012	2.33	0.0	0.48	15.13	0.00	2.072	11.35	0.93	2.6	97.4	0.0	0.49	0.47	0.80	0.93	6.08	29587	3480	45	0	19	1472	0	logfile
✔	7FGH	31581	2022-12-21	2021-07-27	2.18	2.32	—	2.3	0.009	1.03	0.0	0.06	16.15	0.01	2.118	1.69	1.31	3.8	96.2	0.0	-0.25	0.77	0.80	5.03	2.3	0.002	0.54	0.0	0.04	16.34	0.00	2.267	2.06	0.98	2.2	97.8	0.0	0.33	0.91	0.82	0.89	4.58	44532	5448	36	12	12	1416	0	logfile
✔	6Z0U	11023	2022-12-16	2020-05-11	2.9	2.99	—	2.9	0.007	0.73	0.0	0.05	13.19	0.01	2.040	10.20	0.52	6.5	93.5	0.0	-3.59	0.78	0.89	4.49	2.9	0.003	0.60	0.0	0.04	15.01	0.00	2.109	9.11	0.81	4.2	95.8	0.0	-0.27	0.37	0.75	0.86	3.68	87288	10896	72	0	24	1392	0	logfile
✔	7o6E	12738	2022-12-19	2021-04-10	2.1	1.78	2.15	1.6	0.017	1.10	0.0	0.07	18.13	0.01	2.110	3.61	0.00	2.3	97.7	0.0	2.10	0.87	0.88	6.02	1.6	0.003	0.46	0.0	0.03	18.16	0.00	2.221	3.78	0.29	0.5	99.5	0.0	4.53	0.29	0.88	0.89	5.11	35304	4248	48	0	0	1392	0	logfile
✔	8A5i	15175	2022-12-16	2022-06-15	2.3	1.92	2.20	2.2	0.011	1.72	1.0	0.12	15.57	0.02	1.234	3.44	2.48	5.4	93.2	1.4	-2.45	0.49	0.73	5.52	2.1	0.005	0.78	0.0	0.04	15.64	0.01	1.599	7.73	2.08	4.3	95.4	0.2	-0.31	0.88	0.68	0.85	5.25	89799	2973	56	3022	172	1381	0	logfile
✔	7SCA	25031	2022-12-11	2021-09-27	2.1	2.23	2.15	2.2	0.011	1.14	7.0	0.07	15.33	0.01	2.057	5.53	0.78	1.0	99.0	0.0	2.17	0.79	0.85	5.74	2.2	0.002	0.54	0.0	0.04	16.62	0.00	2.126	8.47	0.98	0.9	99.1	0.0	2.90	1.09	0.79	0.85	5.23	55437	6836	116	0	54	1325	0	logfile
✔	7Z7V	14538	2022-12-20	2022-03-16	2.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	39106	4748	37	0	28	1297	0	logfile
✔	6ZKA	11242	2022-12-20	2020-06-30	2.5	2.55	—	2.5	0.009	1.02	0.0	0.16	12.79	0.01	2.189	4.76	0.07	2.5	97.5	0.0	-2.18	0.74	0.91	6.10	2.5	0.003	0.59	0.0	0.04	16.07	0.00	2.132	9.51	1.23	2.2	97.8	0.0	1.73	1.13	0.75	0.91	5.10	40800	4694	74	0	28	1293	0	logfile
✔	7RCV	24407	2022-12-11	2021-07-08	2.01	1.78	—	1.9	0.024	2.35	0.0	0.13	20.29	0.01	1.915	14.12	1.99	2.6	97.4	0.0	0.92	0.78	0.79	5.10	1.9	0.006	0.91	0.0	0.05	19.05	0.01	2.010	12.97	2.06	2.8	97.1	0.0	0.50	0.91	0.81	0.84	5.43	54656	5544	114	0	228	1236	0	logfile
✔	7N8o	24239	2022-12-11	2021-06-15	1.93	1.73	—	1.9	0.024	2.36	0.0	0.13	20.20	0.01	1.522	14.96	1.91	3.0	96.9	0.1	0.75	0.73	0.75	5.48	1.8	0.004	0.76	0.0	0.05	18.62	0.01	2.011	12.03	1.57	2.8	97.2	0.0	1.10	0.35	0.75	0.77	5.40	54656	5544	113	0	228	1236	0	logfile
✔	7JFo	22308	2022-12-20	2020-07-17	2.13	2.12	—	2.1	0.022	1.67	2.0	0.11	12.07	0.01	2.198	6.82	1.23	3.9	96.1	0.0	-0.96	0.72	0.78	6.96	2.1	0.003	0.59	0.0	0.04	14.54	0.00	2.211	7.06	1.03	2.2	97.8	0.0	1.32	0.79	0.70	0.81	5.75	38958	4832	40	0	0	1198	0	logfile
✔	7Z7S	14536	2022-12-20	2022-03-16	2.4	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	39208	4774	37	0	31	1184	0	logfile
✔	6QSU	4629	2022-12-15	2019-02-22	2.4	2.64	2.56	2.6	0.006	0.65	0.0	0.05	13.44	0.00	1.918	4.91	0.61	4.6	95.4	0.0	0.27	0.81	0.87	4.68	2.6	0.003	0.56	0.0	0.05	16.46	0.00	1.934	5.89	0.83	3.5	96.5	0.0	0.34	1.15	0.72	0.86	4.25	75758	9684	60	0	36	1178	0	logfile
✔	7JSX	22462	2022-12-20	2020-08-16	2.06	2.05	—	2.1	0.022	1.67	2.0	0.11	11.97	0.01	2.201	6.88	1.26	3.9	96.1	0.0	-1.03	0.74	0.76	5.10	2.0	0.004	0.67	0.0	0.04	14.34	0.00	2.160	8.36	0.80	2.3	97.7	0.0	0.95	0.64	0.83	0.90	6.36	38813	4832	40	0	0	1141	0	logfile
✔	7P8W	13256	2022-12-13	2021-07-23	2.2	2.34	—	2.3	0.014	1.79	4.0	0.09	14.82	0.01	2.340	2.04	0.75	3.8	96.0	0.2	-1.36	0.85	0.92	6.91	2.3	0.003	0.62	0.0	0.04	15.61	0.00	2.221	3.56	0.46	2.9	97.1	0.0	0.56	1.15	0.85	0.91	6.13	17668	2008	12	0	8	1110	0	logfile
✔	7QSN	14139	2022-12-14	2022-01-13	2.81	2.74	2.82	2.7	0.008	0.92	0.0	0.85	15.14	0.00	1.853	4.76	0.01	3.3	96.7	0.0	-0.45	0.77	0.87	4.68	2.7	0.007	1.31	0.0	0.25	16.33	0.00	2.035	7.33	1.12	2.2	97.8	0.0	1.37	1.17	0.77	0.88	3.98	69319	8201	116	0	59	1096	0	logfile

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