Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7Woo	32653	2022-05-14	2022-01-22	3.71	4.08	—	3.9	0.010	1.69	139.0	0.10	15.86	0.01	1.041	23.20	4.33	9.3	88.5	2.2	-3.11	0.47	0.44	0.31	3.9	0.003	0.81	0.0	0.04	16.47	0.00	2.074	14.80	0.32	8.3	91.4	0.3	-0.41	1.64	0.48	0.44	0.13	66949	8644	12	0	0	0	0	logfile
✔	7Wo9	32643	2022-05-13	2022-01-20	2.81	3.01	—	3.0	0.002	0.50	0.0	0.04	13.97	0.00	2.227	5.93	0.00	4.2	95.8	0.0	1.49	0.70	0.78	2.04	3.0	0.003	0.51	0.0	0.04	16.16	0.00	2.206	5.43	0.87	4.8	95.2	0.0	1.87	0.74	0.69	0.74	1.81	12743	1581	1	0	0	0	0	logfile
✔	7WNQ	32633	2022-05-12	2022-01-19	2.7	2.91	2.72	3.0	0.012	1.20	6.0	0.07	9.17	0.01	2.155	1.80	0.63	3.6	96.4	0.0	-5.53	0.68	0.86	4.76	3.0	0.002	0.59	0.0	0.04	14.24	0.00	2.303	3.77	0.74	2.1	97.9	0.0	2.12	1.25	0.67	0.86	3.58	8847	1104	3	0	0	0	0	logfile
✔	7WLT	32592	2022-05-16	2022-01-13	3.46	3.71	—	3.8	0.011	1.11	0.0	0.06	14.87	0.01	2.142	20.78	0.89	5.9	93.9	0.2	1.88	0.65	0.80	2.30	3.8	0.007	0.72	0.0	0.04	16.10	0.01	2.159	9.93	0.35	5.2	94.8	0.0	1.33	0.49	0.65	0.81	1.86	33912	4059	6	0	27	0	0	logfile
✔	7WLL	32587	2022-05-13	2022-01-13	3.6	3.89	—	3.8	0.012	1.20	2.0	0.15	15.28	0.00	2.026	13.97	0.50	7.3	92.6	0.1	-0.42	0.60	0.81	1.99	3.8	0.003	0.82	0.0	0.06	16.30	0.00	2.153	12.47	0.30	6.9	93.1	0.0	0.10	0.53	0.60	0.81	1.21	9540	1135	1	0	21	0	0	logfile
✔	7WLK	32586	2022-05-13	2022-01-13	3.6	3.50	—	3.6	0.010	0.98	0.0	0.06	14.76	0.00	1.853	14.07	0.10	6.7	93.3	0.0	0.27	0.72	0.79	1.77	3.6	0.004	0.76	0.0	0.04	16.01	0.01	2.172	11.83	0.20	5.1	94.9	0.0	0.74	1.19	0.72	0.79	1.35	9461	1135	1	0	17	0	0	logfile
✔	7WLJ	32585	2022-05-13	2022-01-13	3.9	4.18	—	4.1	0.009	1.01	0.0	0.14	14.57	0.00	1.912	18.96	0.10	6.7	93.3	0.0	0.03	0.59	0.80	1.62	4.1	0.003	0.88	0.0	0.04	16.19	0.00	2.164	16.82	0.20	6.1	93.9	0.0	-0.76	1.26	0.60	0.80	1.37	9450	1135	1	0	15	0	0	logfile
✔	7WLi	32584	2022-05-13	2022-01-13	3.3	3.59	—	3.6	0.012	1.01	1.0	0.06	14.87	0.01	1.888	15.00	0.20	7.3	92.5	0.2	-0.17	0.59	0.78	2.16	3.6	0.007	1.02	0.0	0.04	16.10	0.01	2.055	15.31	0.20	6.2	93.8	0.0	0.14	0.47	0.60	0.79	1.88	9493	1135	1	0	21	0	0	logfile
✔	7WLD	32582	2022-05-14	2022-01-13	2.53	2.67	—	2.7	0.009	0.97	0.0	0.06	15.84	0.01	2.197	10.11	1.87	2.2	97.7	0.1	0.47	0.62	0.84	3.41	2.7	0.008	0.99	1.0	0.05	16.45	0.01	1.718	4.68	1.01	2.6	97.3	0.0	0.81	0.94	0.65	0.87	3.17	19732	2393	11	0	29	0	0	logfile
✔	7WLC	32581	2022-05-12	2022-01-13	4.0	4.24	—	4.1	0.003	0.70	0.0	0.04	13.71	0.00	2.198	15.62	0.00	6.1	93.9	0.0	-1.35	0.71	0.77	—	4.1	0.005	0.84	0.0	0.05	16.05	0.01	2.148	18.41	1.67	7.8	92.2	0.0	-1.84	0.50	0.72	0.78	—	3307	430	3	0	0	0	0	logfile
✔	7WKK	32566	2022-05-16	2022-01-10	4.2	4.30	—	3.9	0.006	0.63	0.0	0.04	4.94	0.00	2.138	2.83	0.00	4.7	95.2	0.1	-2.36	0.46	0.60	—	3.8	0.005	0.77	0.0	0.04	5.57	0.00	2.116	4.48	0.00	9.6	90.3	0.0	-0.89	0.63	0.52	0.68	—	92821	18728	30	0	0	0	0	logfile
✔	7WKA	32564	2022-05-16	2022-01-08	3.64	3.27	—	3.6	0.002	0.47	0.0	0.04	7.20	0.00	2.171	7.53	0.11	4.0	95.9	0.1	-1.95	0.59	0.46	0.82	3.8	0.004	0.79	0.0	0.05	13.97	0.01	2.068	15.51	0.68	3.4	96.5	0.1	-0.45	1.57	0.76	0.72	1.23	31575	4041	7	0	0	0	0	logfile
✔	7WK9	32563	2022-05-16	2022-01-08	3.48	3.16	—	3.7	0.002	0.47	0.0	0.04	7.12	0.00	2.151	7.47	0.00	3.8	96.1	0.1	-2.01	0.60	0.48	0.90	3.7	0.004	0.77	0.0	0.04	14.04	0.01	2.091	13.15	0.57	3.4	96.6	0.1	-0.37	1.14	0.77	0.75	1.25	29907	3823	7	0	0	0	0	logfile
✔	7WK8	32562	2022-05-12	2022-01-08	3.61	2.50	—	2.3	0.002	0.52	0.0	0.04	6.81	0.00	2.270	7.76	0.00	4.5	95.3	0.2	-1.21	0.77	0.74	4.09	2.3	0.003	0.62	0.0	0.04	13.24	0.01	2.165	10.55	0.00	3.0	96.9	0.2	0.47	1.28	0.79	0.78	3.76	3982	516	4	0	0	0	0	logfile
✔	7WK6	32560	2022-05-12	2022-01-08	3.67	2.86	—	3.8	0.008	1.07	1.0	0.07	15.40	0.01	2.328	5.81	0.57	4.7	94.9	0.4	-5.05	0.77	0.77	2.23	3.7	0.005	0.86	0.0	0.05	18.07	0.00	2.204	16.48	0.43	3.4	96.6	0.0	-1.06	1.41	0.78	0.78	1.72	6428	791	2	0	0	0	0	logfile
✔	7WK5	32559	2022-05-16	2022-01-08	3.66	3.93	—	3.7	0.004	0.75	9.0	0.06	12.41	0.00	2.198	10.02	0.40	3.7	96.2	0.1	-3.67	0.66	0.59	0.50	3.7	0.005	0.77	0.0	0.04	15.41	0.00	2.134	12.52	0.24	4.0	96.0	0.0	-1.37	0.92	0.68	0.64	0.44	29601	3750	4	0	0	0	0	logfile
✔	7WK4	32558	2022-05-16	2022-01-08	3.69	3.98	—	3.8	0.004	0.69	9.0	0.06	13.54	0.00	2.202	11.82	0.61	2.4	97.4	0.1	-0.28	0.68	0.62	0.67	3.8	0.006	0.84	0.0	0.04	15.55	0.01	2.138	11.98	0.24	3.2	96.8	0.0	-0.36	0.70	0.71	0.66	0.92	29541	3743	4	0	0	0	0	logfile
✔	7WK3	32557	2022-05-15	2022-01-08	3.4	2.86	—	3.4	0.004	0.56	0.0	0.04	7.18	0.00	1.998	3.85	0.00	3.6	96.3	0.0	-2.17	0.65	0.57	1.77	3.3	0.004	0.71	0.0	0.04	14.43	0.00	2.154	10.63	0.36	2.9	97.1	0.0	-0.15	1.12	0.79	0.79	1.85	24805	3162	3	0	0	0	0	logfile
✔	7WK2	32556	2022-05-15	2022-01-08	3.1	2.75	—	3.3	0.004	0.57	0.0	0.04	7.30	0.00	1.974	4.04	0.00	3.8	96.2	0.0	-2.33	0.66	0.57	1.89	3.3	0.003	0.71	0.0	0.05	14.60	0.00	1.947	10.34	0.32	2.7	97.3	0.0	-0.05	1.16	0.80	0.79	2.05	24879	3171	3	0	0	0	0	logfile
✔	7WJi	32544	2022-05-17	2022-01-06	4.5	4.96	4.57	4.5	0.006	1.21	1.0	0.07	14.87	0.01	2.258	7.62	0.28	6.1	93.9	0.0	-4.07	0.68	0.55	—	4.4	0.003	0.73	0.0	0.04	14.26	0.00	2.161	14.10	0.02	4.3	95.7	0.0	-0.54	0.88	0.70	0.62	—	41173	5128	5	0	0	0	0	logfile

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