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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6Po1 | 20406 | 2023-12-07 | 2019-07-03 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53244 | 3407 | 20 | 0 | 18 | 0 | 26717 | logfile |
✘ | 6Q6i | 4468 | 2023-12-08 | 2018-12-11 | 3.7 | 3.77 | — | 3.8 | 0.009 | 1.22 | 0.0 | 0.06 | 17.03 | 0.01 | 2.244 | 8.63 | 1.89 | 16.7 | 83.0 | 0.3 | -5.81 | 0.70 | 0.74 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57200 | 7490 | 10 | 0 | 10 | 0 | 0 | logfile |
✘ | 6JSi | 9882 | 2023-12-09 | 2019-04-08 | 4.7 | 4.70 | — | 4.6 | 0.007 | 1.48 | 0.0 | 0.06 | 15.33 | 0.01 | 2.231 | 10.68 | 2.42 | 23.2 | 72.3 | 4.5 | -6.05 | 0.64 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62820 | 5844 | 9 | 0 | 4044 | 0 | 0 | logfile |
✘ | 7o0W | 12681 | 2023-12-08 | 2021-03-27 | 2.47 | 2.42 | — | 2.3 | 0.018 | 4.34 | 0.0 | 0.06 | 22.62 | 0.01 | 2.010 | 1.98 | 0.28 | 1.4 | 98.6 | 0.0 | 1.25 | 0.82 | 0.86 | 5.37 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56476 | 5076 | 236 | 0 | 320 | 406 | 0 | logfile |
✘ | 7CK6 | 30382 | 2023-12-08 | 2020-07-15 | 3.4 | 4.40 | — | 4.1 | 0.008 | 1.14 | 2.0 | 0.06 | 13.47 | 0.00 | 1.652 | 36.32 | 4.12 | 6.1 | 93.1 | 0.8 | 0.38 | 0.57 | 0.73 | 0.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7460 | 936 | 11 | 0 | 1 | 0 | 0 | logfile |
✘ | 7WLM | 32588 | 2023-12-08 | 2022-01-13 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7308 | 603 | 9 | 0 | 51 | 54 | 0 | logfile |
✘ | 6ZY9 | 11555 | 2023-12-10 | 2020-07-30 | 3.3 | 3.42 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.73 | 0.01 | 2.174 | 2.45 | 0.25 | 4.7 | 95.3 | 0.0 | -5.76 | 0.62 | 0.71 | 1.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14973 | 1985 | 14 | 0 | 4 | 0 | 0 | logfile |
✘ | 7DGR | 30674 | 2023-12-07 | 2020-11-12 | 4.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 107305 | 13811 | 102 | 0 | 37 | 0 | 0 | logfile |
✘ | 6PB1 | 20285 | 2023-12-08 | 2019-06-12 | 2.8 | 3.39 | — | 3.4 | 0.003 | 0.79 | 0.0 | 0.06 | 9.37 | 0.01 | 2.288 | 4.32 | 0.00 | 1.9 | 98.1 | 0.0 | -2.93 | 0.56 | 0.75 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8785 | 1069 | 7 | 0 | 9 | 0 | 0 | logfile |
✘ | 5XNN | 6743 | 2023-12-09 | 2017-05-23 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10020 | 854 | 8 | 0 | 72 | 0 | 0 | logfile |
✘ | 7VGS | 31978 | 2023-12-10 | 2021-09-18 | 2.8 | 3.28 | — | 3.3 | 0.002 | 0.66 | 0.0 | 0.04 | 12.19 | 0.01 | 2.230 | 9.89 | 0.38 | 7.0 | 93.0 | 0.0 | -1.16 | 0.67 | 0.75 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9700 | 1254 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7XTQ | 33452 | 2023-12-08 | 2022-05-17 | 3.2 | 2.29 | 3.30 | 2.1 | 0.004 | 0.75 | 0.0 | 0.05 | 12.54 | 0.01 | 2.192 | 5.84 | 0.00 | 3.1 | 96.9 | 0.0 | -0.37 | 0.73 | 0.74 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8010 | 1027 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7SPi | 24771 | 2023-12-08 | 2021-11-02 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7CoY | 30420 | 2023-12-08 | 2020-08-05 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57966 | 6096 | 66 | 0 | 279 | 84 | 0 | logfile |
✘ | 6XZP | 10664 | 2023-12-10 | 2020-02-05 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 6PoD | 20412 | 2023-12-07 | 2019-07-03 | 4.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53637 | 3427 | 20 | 0 | 25 | 0 | 26898 | logfile |
✘ | 7RGM | 24452 | 2023-12-08 | 2021-07-15 | 2.8 | 2.86 | — | 2.9 | 0.014 | 1.70 | 0.0 | 0.08 | 17.17 | 0.01 | 2.328 | 1.94 | 3.63 | 5.2 | 94.6 | 0.3 | -1.77 | 0.62 | 0.86 | 3.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 59928 | 3872 | 16 | 0 | 32 | 0 | 29736 | logfile |
✘ | 6ND1 | 0440 | 2023-12-08 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7S9Y | 24941 | 2023-12-08 | 2021-09-21 | 3.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7395 | 901 | 1 | 0 | 3 | 0 | 0 | logfile |
✘ | 7ZDG | 14645 | 2023-12-08 | 2022-03-29 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9007 | 1157 | 2 | 0 | 1 | 0 | 0 | logfile |