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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7W3K | 32283 | 2023-12-08 | 2021-11-25 | 3.6 | 4.78 | — | 3.0 | 0.004 | 0.82 | 0.0 | 0.05 | 14.42 | 0.01 | 1.743 | 5.88 | 0.18 | 6.0 | 93.9 | 0.1 | -1.19 | 0.80 | 0.74 | 1.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110657 | 14090 | 53 | 0 | 5 | 0 | 0 | logfile |
✘ | 8E7S | 27940 | 2023-12-09 | 2022-08-24 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62847 | 7618 | 64 | 0 | 63 | 0 | 0 | logfile |
✘ | 7X7V | 33049 | 2023-12-08 | 2022-03-10 | 3.83 | 4.04 | — | 4.0 | 0.006 | 0.98 | 1.0 | 0.06 | 13.94 | 0.01 | 2.274 | 5.37 | 0.41 | 7.1 | 92.8 | 0.1 | -3.88 | 0.57 | 0.71 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6876 | 873 | 9 | 0 | 4 | 0 | 0 | logfile |
✘ | 8iUM | 35726 | 2023-12-09 | 2023-03-24 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9955 | 1270 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7ZK7 | 14757 | 2023-12-08 | 2022-04-12 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9112 | 1158 | 1 | 0 | 3 | 0 | 0 | logfile |
✘ | 7YCA | 33737 | 2023-12-09 | 2022-07-01 | 2.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64832 | 5632 | 60 | 0 | 450 | 4 | 0 | logfile |
✘ | 8SL0 | 40570 | 2023-12-07 | 2023-04-20 | 3.3 | 4.17 | 3.09 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 16.00 | 0.00 | 2.201 | 7.96 | 0.00 | 8.4 | 91.2 | 0.4 | -1.67 | 0.42 | 0.83 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 1737 | 228 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8iUH | 35722 | 2023-12-08 | 2023-03-24 | 3.4 | 3.08 | 3.43 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 12.78 | 0.00 | 1.886 | 8.52 | 0.02 | 2.6 | 97.4 | 0.0 | -1.63 | 0.64 | 0.68 | 1.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58239 | 6863 | 32 | 162 | 10 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2023-12-08 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8CPE | 16780 | 2023-12-07 | 2023-03-02 | 4.0 | 3.90 | 2.90 | 4.2 | 0.002 | 0.93 | 0.0 | 0.06 | 12.17 | 0.00 | 2.224 | 3.26 | 0.00 | 4.1 | 95.9 | 0.0 | -3.80 | 0.54 | 0.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5520 | 385 | 5 | 0 | 0 | 0 | 2615 | logfile |
✘ | 8H87 | 34531 | 2023-12-08 | 2022-10-21 | 2.53 | 2.73 | 2.50 | 2.7 | 0.011 | 1.55 | 0.0 | 0.08 | 18.83 | 0.02 | 2.300 | 4.49 | 0.91 | 2.3 | 97.7 | 0.0 | -1.32 | 0.58 | 0.79 | 4.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7083 | 777 | 6 | 0 | 48 | 147 | 0 | logfile |
✘ | 6BZE | 7314 | 2023-12-10 | 2017-12-23 | 4.0 | 4.03 | — | 4.0 | 0.009 | 1.42 | 0.0 | 0.08 | 17.34 | 0.01 | 1.648 | 79.81 | 9.00 | 13.2 | 86.4 | 0.4 | -5.34 | 0.37 | 0.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7072 | 848 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8J4F | 35975 | 2023-12-09 | 2023-04-19 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12419 | 1446 | 7 | 0 | 30 | 0 | 0 | logfile |
✘ | 6XKJ | 22219 | 2023-12-09 | 2020-06-26 | 3.54 | 3.39 | — | 3.4 | 0.009 | 0.83 | 0.0 | 0.05 | 14.92 | 0.00 | 2.246 | 12.86 | 0.00 | 2.4 | 97.6 | 0.0 | 0.54 | 0.62 | 0.85 | 1.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11056 | 1360 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZQ9 | 14867 | 2023-12-08 | 2022-04-29 | 2.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 92130 | 4713 | 47 | 0 | 397 | 88 | 35670 | logfile |
✘ | 8S90 | 40233 | 2023-12-10 | 2023-03-27 | 4.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15323 | 2096 | 9 | 0 | 1 | 0 | 0 | logfile |
✘ | 8SA5 | 40265 | 2023-12-08 | 2023-03-31 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7649 | 0 | 4 | 345 | 2 | 0 | 0 | logfile |
✘ | 8i5B | 35193 | 2023-12-10 | 2023-01-24 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13440 | 1563 | 8 | 0 | 30 | 0 | 0 | logfile |
✘ | 8B9i | 15932 | 2023-12-10 | 2022-10-06 | 2.95 | 3.92 | 2.99 | 3.5 | 0.011 | 1.24 | 0.0 | 0.05 | 19.26 | 0.01 | 1.963 | 11.55 | 2.31 | 3.6 | 96.3 | 0.1 | 0.95 | 0.84 | 0.75 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8026 | 984 | 4 | 11 | 3 | 5 | 0 | logfile |
✘ | 8HNL | 34915 | 2023-12-08 | 2022-12-08 | 2.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8944 | 1135 | 6 | 0 | 3 | 0 | 0 | logfile |