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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6PLS | 20374 | 2024-03-16 | 2019-07-01 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14610 | 1720 | 15 | 0 | 75 | 0 | 0 | logfile |
✘ | 7YRQ | 34064 | 2024-03-14 | 2022-08-10 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9812 | 1247 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7WDB | 32436 | 2024-03-18 | 2021-12-21 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22400 | 2660 | 8 | 0 | 28 | 0 | 0 | logfile |
✘ | 8ERA | 28551 | 2024-03-21 | 2022-10-11 | 2.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29054 | 3644 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 6PLV | 20377 | 2024-03-16 | 2019-07-01 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14655 | 1725 | 15 | 0 | 75 | 0 | 0 | logfile |
✘ | 7EQD | 31258 | 2024-03-19 | 2021-05-01 | 2.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23122 | 2302 | 70 | 0 | 92 | 0 | 0 | logfile |
✘ | 5GL0 | 9520 | 2024-03-11 | 2016-07-07 | 4.2 | 4.40 | — | 4.2 | 0.018 | 1.72 | 17.0 | 0.10 | 11.34 | 0.01 | 1.957 | 21.25 | 0.51 | 6.5 | 90.6 | 2.9 | -2.58 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 6PLU | 20376 | 2024-03-16 | 2019-07-01 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14665 | 1720 | 15 | 0 | 80 | 0 | 0 | logfile |
✘ | 6U8Q | 20689 | 2024-03-18 | 2019-09-05 | 4.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21129 | 2442 | 18 | 96 | 6 | 0 | 0 | logfile |
✘ | 6PLR | 20373 | 2024-03-16 | 2019-07-01 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14685 | 1735 | 15 | 0 | 75 | 0 | 0 | logfile |
✘ | 7BPA | 30149 | 2024-03-23 | 2020-03-21 | 3.3 | 3.57 | — | 3.5 | 0.009 | 1.25 | 0.0 | 0.07 | 14.11 | 0.01 | 2.169 | 3.82 | 0.03 | 5.8 | 94.2 | 0.0 | -3.01 | 0.75 | 0.83 | 2.37 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35370 | 4452 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 5GKY | 9518 | 2024-03-11 | 2016-07-07 | 3.8 | 4.18 | — | 4.0 | 0.017 | 1.70 | 19.0 | 0.10 | 11.29 | 0.01 | 1.789 | 19.04 | 0.51 | 5.8 | 91.8 | 2.5 | -2.71 | 0.73 | 0.79 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111036 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 6NC3 | 0434 | 2024-03-23 | 2018-12-10 | 4.5 | 5.02 | 4.53 | 4.5 | 0.020 | 1.83 | 0.0 | 0.11 | 16.39 | 0.01 | 2.381 | 0.92 | 0.15 | 3.1 | 96.5 | 0.4 | 0.08 | 0.77 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38904 | 4686 | 72 | 0 | 162 | 0 | 0 | logfile |
✘ | 8HAJ | 34592 | 2024-03-17 | 2022-10-26 | 4.8 | 4.66 | 4.63 | 3.6 | 0.003 | 0.60 | 0.0 | 0.03 | 24.86 | 0.00 | 2.213 | 11.34 | 0.00 | 2.3 | 97.7 | 0.0 | 1.21 | 0.88 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17214 | 1305 | 11 | 326 | 0 | 0 | 0 | logfile |
✘ | 6RWN | 10043 | 2024-03-17 | 2019-06-05 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18346 | 2076 | 26 | 86 | 16 | 8 | 0 | logfile |
✘ | 6WM2 | 21847 | 2024-03-16 | 2020-04-20 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73243 | 9171 | 56 | 0 | 63 | 0 | 0 | logfile |
✘ | 3J8H | 2807 | 2024-03-11 | 2014-10-26 | 3.8 | 3.95 | — | 3.8 | 0.006 | 1.31 | 4.0 | 0.05 | 10.89 | 0.01 | 1.488 | 33.49 | 2.47 | 5.3 | 92.8 | 1.9 | -2.06 | 0.65 | 0.64 | 1.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111160 | 12796 | 12 | 0 | 2276 | 0 | 0 | logfile |
✘ | 6YXR | 10995 | 2024-03-11 | 2020-05-03 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31910 | 2783 | 20 | 0 | 194 | 0 | 0 | logfile |
✘ | 7QPD | 14119 | 2024-03-15 | 2022-01-03 | 3.73 | 3.98 | — | 3.9 | 0.005 | 0.81 | 0.0 | 0.05 | 12.54 | 0.00 | 2.225 | 9.51 | 0.09 | 4.9 | 95.0 | 0.1 | -1.20 | 0.80 | 0.76 | 2.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11521 | 1544 | 7 | 0 | 10 | 0 | 0 | logfile |
✘ | 7AoD | 11841 | 2024-03-11 | 2020-10-14 | 4.5 | 4.61 | — | 4.5 | 0.007 | 0.89 | 0.0 | 0.05 | 14.84 | 0.01 | 1.858 | 27.36 | 1.95 | 10.7 | 88.9 | 0.3 | -4.20 | 0.79 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 59256 | 7466 | 34 | 0 | 12 | 0 | 0 | logfile |