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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8B9i | 15932 | 2023-12-10 | 2022-10-06 | 2.95 | 3.92 | 2.99 | 3.5 | 0.011 | 1.24 | 0.0 | 0.05 | 19.26 | 0.01 | 1.963 | 11.55 | 2.31 | 3.6 | 96.3 | 0.1 | 0.95 | 0.84 | 0.75 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8026 | 984 | 4 | 11 | 3 | 5 | 0 | logfile |
✘ | 5XNo | 6744 | 2023-12-09 | 2017-05-23 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10020 | 854 | 8 | 0 | 72 | 0 | 0 | logfile |
✘ | 8J0D | 35899 | 2023-12-09 | 2023-04-10 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9105 | 711 | 8 | 0 | 74 | 0 | 0 | logfile |
✘ | 8iX2 | 35787 | 2023-12-08 | 2023-03-31 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8238 | 654 | 6 | 0 | 57 | 0 | 0 | logfile |
✘ | 8FGX | 29077 | 2023-12-09 | 2022-12-13 | 2.62 | 3.60 | 2.58 | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 9.99 | 0.00 | 2.400 | 1.82 | 0.00 | 1.6 | 98.4 | 0.0 | 1.41 | 0.90 | 0.88 | 4.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9899 | 645 | 4 | 0 | 3 | 0 | 4873 | logfile |
✘ | 8THG | 41261 | 2023-12-10 | 2023-07-16 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13168 | 1565 | 9 | 0 | 23 | 4 | 0 | logfile |
✘ | 8Jii | 36312 | 2023-12-08 | 2023-05-26 | 3.17 | 2.37 | — | 3.4 | 0.006 | 0.84 | 0.0 | 0.05 | 14.12 | 0.00 | 1.963 | 7.59 | 0.10 | 4.6 | 95.4 | 0.0 | -1.97 | 0.74 | 0.78 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9083 | 1144 | 6 | 0 | 3 | 1 | 0 | logfile |
✘ | 8iWZ | 35784 | 2023-12-08 | 2023-03-31 | 2.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8238 | 654 | 6 | 0 | 57 | 0 | 0 | logfile |
✘ | 8SHE | 40485 | 2023-12-10 | 2023-04-13 | 2.8 | 3.49 | 2.89 | 3.2 | 0.005 | 0.56 | 0.0 | 0.04 | 14.08 | 0.00 | 1.875 | 6.81 | 0.00 | 3.6 | 96.4 | 0.0 | 1.64 | 0.86 | 0.89 | 2.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66179 | 8601 | 49 | 0 | 48 | 19 | 0 | logfile |
✘ | 8JZS | 36752 | 2023-12-08 | 2023-07-06 | 2.95 | 3.15 | 2.92 | 3.2 | 0.008 | 0.93 | 0.0 | 0.06 | 13.27 | 0.01 | 2.299 | 10.90 | 0.00 | 4.4 | 95.2 | 0.4 | 0.71 | 0.69 | 0.82 | 1.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7500 | 972 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 8K7B | 36937 | 2023-12-09 | 2023-07-26 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9496 | 1180 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 8AN3 | 15531 | 2023-12-08 | 2022-08-04 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8iWY | 35783 | 2023-12-08 | 2023-03-31 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8238 | 654 | 6 | 0 | 57 | 0 | 0 | logfile |
✘ | 8Go3 | 34171 | 2023-12-09 | 2022-08-24 | 3.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9739 | 1203 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 8HL3 | 34868 | 2023-12-07 | 2022-11-28 | 4.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8S9C | 40239 | 2023-12-10 | 2023-03-27 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13534 | 1565 | 10 | 0 | 33 | 20 | 0 | logfile |
✘ | 8HFY | 34728 | 2023-12-09 | 2022-11-13 | 3.21 | 3.55 | 3.27 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 14.41 | 0.00 | 2.081 | 4.76 | 1.44 | 3.2 | 96.8 | 0.0 | 0.29 | 0.74 | 0.83 | 2.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6568 | 789 | 6 | 0 | 10 | 0 | 0 | logfile |
✘ | 7YNF | 33960 | 2023-12-07 | 2022-07-30 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2988 | 378 | 9 | 0 | 8 | 0 | 0 | logfile |
✘ | 7VFF | 31951 | 2023-12-09 | 2021-09-13 | 4.1 | 3.76 | 3.90 | 4.0 | 0.007 | 0.72 | 0.0 | 0.05 | 13.87 | 0.00 | 2.334 | 2.40 | 0.41 | 3.6 | 96.4 | 0.0 | -0.82 | 0.79 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12579 | 1581 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7DXA | 30902 | 2023-12-10 | 2021-01-18 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15162 | 1629 | 23 | 0 | 50 | 0 | 0 | logfile |