Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7N0D	24104	2022-07-05	2021-05-25	2.5	3.26	—	3.2	0.005	0.84	0.0	0.05	13.20	0.01	1.396	4.36	0.00	1.1	98.9	0.0	-2.65	0.72	0.78	4.49	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21846	2572	26	76	28	4	0	logfile
✘	7RH7	24457	2022-07-06	2021-07-16	3.0	3.06	—	3.2	0.010	2.04	0.0	0.05	16.57	0.01	1.182	16.48	0.00	7.7	92.1	0.2	-0.61	0.55	0.70	2.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	93330	6072	44	0	68	0	44390	logfile
✘	7RH5	24455	2022-07-08	2021-07-16	3.0	3.17	—	3.2	0.011	2.12	1.0	0.05	16.66	0.01	1.180	16.90	0.11	7.7	92.0	0.2	-0.68	0.70	0.81	3.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48948	6072	43	0	68	0	0	logfile
✘	7LX0	23563	2022-07-04	2021-03-02	2.96	3.12	—	3.0	0.032	3.33	0.0	0.10	19.33	0.02	1.204	15.42	2.03	5.6	94.2	0.1	-3.24	0.82	0.87	3.18	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72462	6699	60	0	447	0	0	logfile
✘	7LPC	23476	2022-07-04	2021-02-11	3.06	2.87	2.85	3.1	0.013	1.17	0.0	0.21	19.57	0.00	1.232	5.69	0.00	2.0	98.0	0.0	0.83	0.64	0.80	2.87	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15256	1816	8	0	40	0	0	logfile
✘	6VPV	21320	2022-07-05	2020-02-04	2.7	3.25	—	3.2	0.007	1.04	0.0	0.05	19.21	0.05	1.222	10.40	0.00	4.1	95.9	0.0	-1.73	0.59	0.79	3.68	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72192	6753	60	0	384	0	0	logfile
✘	7LPB	23475	2022-07-04	2021-02-11	3.54	3.01	3.50	3.6	0.012	1.00	0.0	0.05	17.37	0.01	1.232	10.12	0.00	5.7	94.3	0.0	-1.27	0.61	0.75	2.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18392	2384	8	0	28	0	0	logfile
✘	7LPA	23474	2022-07-04	2021-02-11	3.37	3.43	3.23	3.5	0.008	0.82	0.0	0.05	17.52	0.00	1.233	7.90	0.00	4.1	95.9	0.0	-0.82	0.56	0.75	2.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18634	2392	8	0	30	0	0	logfile
✘	7LP9	23473	2022-07-04	2021-02-11	2.63	3.37	2.55	3.0	0.010	1.03	0.0	0.20	16.98	0.00	1.232	4.78	0.00	2.7	97.3	0.0	1.57	0.73	0.84	3.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20977	2536	8	0	46	0	0	logfile
✘	7D5K	30583	2022-07-04	2020-09-26	3.5	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17667	2181	9	0	12	0	0	logfile
✘	7EU8	31309	2022-07-04	2021-05-16	4.07	4.11	—	3.6	0.002	0.40	0.0	0.04	7.49	0.00	1.231	3.16	3.51	2.0	97.9	0.1	1.10	0.75	0.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18670	3010	8	0	8	0	0	logfile
✘	7LYT	23601	2022-07-04	2021-03-08	2.9	2.52	2.91	3.0	0.003	0.54	0.0	0.04	18.39	0.00	1.178	7.23	0.33	0.0	100.0	0.0	-1.59	0.82	0.80	2.24	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14354	712	5	92	6	0	6722	logfile
✘	7DH5	30678	2022-07-03	2020-11-12	3.16	3.27	3.08	3.3	0.008	0.77	0.0	0.05	13.89	0.00	1.186	10.70	0.00	5.6	94.4	0.0	-3.78	0.66	0.81	3.17	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7850	1027	5	0	1	0	0	logfile
✘	7DEG	30657	2022-07-03	2020-11-04	3.4	3.53	—	3.5	0.018	1.47	0.0	0.07	17.32	0.03	1.203	26.71	1.10	16.6	83.0	0.4	-6.17	0.71	0.85	2.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12852	1520	12	0	18	0	0	logfile
✘	7DUQ	30866	2022-07-03	2021-01-11	2.5	2.82	—	2.8	0.006	0.82	0.0	0.06	13.35	0.00	1.330	10.87	0.30	2.3	97.7	0.0	-0.86	0.66	0.78	3.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9602	1174	7	0	8	0	0	logfile
✘	7DRT	30827	2022-07-03	2020-12-29	2.2	2.32	—	2.3	0.011	1.31	9.0	0.09	12.83	0.01	1.414	5.88	2.38	5.4	94.1	0.5	-0.76	0.39	0.58	3.02	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6849	830	7	0	7	10	0	logfile
✘	6QFA	4542	2022-07-04	2019-01-09	2.49	2.59	2.43	2.6	0.005	0.74	0.0	0.06	10.73	0.01	1.323	5.44	0.00	1.8	98.2	0.0	-2.14	0.73	0.85	4.50	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18755	2270	20	0	35	0	0	logfile
✘	7R7U	24305	2022-07-05	2021-06-25	4.3	4.05	—	3.8	0.005	1.09	0.0	0.06	15.33	0.01	2.278	7.12	0.04	8.8	91.2	0.0	-3.72	0.78	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25362	3240	6	0	0	0	0	logfile
✘	7oNB	12994	2022-07-04	2021-05-25	3.1	3.40	3.04	3.0	0.005	0.90	0.0	0.06	13.87	0.01	1.196	5.64	0.00	3.6	96.4	0.0	-1.28	0.76	0.71	1.66	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20140	2568	14	46	6	0	0	logfile
✘	7K5C	22680	2022-07-07	2020-09-16	2.7	2.91	—	2.9	0.004	0.53	0.0	0.04	14.17	0.00	2.201	4.90	0.00	3.2	96.8	0.0	1.14	0.71	0.85	3.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	41547	5268	24	0	0	219	0	logfile

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