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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5FN5 | 3240 | 2023-12-09 | 2015-11-10 | 4.3 | 4.62 | — | 4.3 | 0.012 | 1.85 | 28.0 | 0.11 | 18.82 | 0.01 | 2.074 | 13.59 | 14.00 | 11.4 | 84.3 | 4.3 | -1.91 | 0.65 | 0.62 | — | 4.3 | 0.003 | 0.86 | 0.0 | 0.04 | 13.72 | 0.01 | 2.178 | 20.91 | 0.10 | 8.6 | 90.7 | 0.7 | -0.88 | 1.04 | 0.69 | 0.79 | — | 9645 | 1227 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ai5 | 11791 | 2023-12-10 | 2020-09-26 | 4.4 | 4.82 | 4.47 | 4.4 | 0.014 | 1.85 | 5.0 | 0.10 | 18.26 | 0.01 | 2.472 | 3.75 | 1.14 | 3.3 | 96.7 | 0.0 | -2.02 | 0.86 | 0.70 | — | 4.3 | 0.003 | 0.65 | 0.0 | 0.04 | 17.15 | 0.00 | 2.147 | 13.52 | 0.00 | 2.0 | 98.0 | 0.0 | 0.36 | 0.94 | 0.89 | 0.78 | — | 13376 | 1576 | 6 | 44 | 2 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2023-12-07 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 25.64 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.96 | 0.0 | 0.05 | 27.65 | 0.01 | 1.738 | 53.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.75 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 7XLT | 33286 | 2023-12-07 | 2022-04-22 | 4.4 | 4.55 | 4.45 | 4.3 | 0.004 | 0.89 | 0.0 | 0.05 | 18.80 | 0.01 | 2.288 | 8.02 | 0.79 | 6.8 | 93.2 | 0.0 | -2.19 | 0.68 | 0.59 | — | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 16.70 | 0.00 | 2.146 | 23.96 | 0.00 | 6.6 | 93.4 | 0.0 | -2.27 | 1.73 | 0.74 | 0.72 | — | 4985 | 431 | 4 | 80 | 0 | 0 | 0 | logfile |
✔ | 6NT6 | 0503 | 2023-12-07 | 2019-01-28 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 11.99 | 0.01 | 2.316 | 3.70 | 0.00 | 3.8 | 96.2 | 0.0 | -3.32 | 0.69 | 0.80 | — | 4.1 | 0.002 | 0.72 | 0.0 | 0.04 | 15.61 | 0.00 | 2.295 | 7.27 | 0.00 | 2.7 | 97.3 | 0.0 | 1.43 | 1.19 | 0.69 | 0.80 | — | 4198 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G8B | 29845 | 2023-12-10 | 2023-02-17 | 4.3 | 7.82 | 4.33 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 28.76 | 0.00 | 2.061 | 8.20 | 1.98 | 1.8 | 98.1 | 0.1 | 1.94 | 0.87 | 0.75 | — | 3.2 | 0.006 | 0.73 | 0.0 | 0.04 | 28.95 | 0.00 | 2.117 | 26.91 | 0.00 | 2.9 | 97.1 | 0.0 | 0.60 | 1.97 | 0.88 | 0.80 | — | 14067 | 902 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 6Mi7 | 9125 | 2023-12-08 | 2018-09-19 | 4.2 | 4.24 | — | 4.2 | 0.006 | 1.19 | 0.0 | 0.06 | 12.82 | 0.01 | 2.053 | 7.37 | 0.38 | 9.3 | 90.7 | 0.0 | -5.97 | 0.58 | 0.80 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 13.86 | 0.00 | 2.226 | 10.59 | 0.13 | 6.6 | 93.4 | 0.0 | -2.39 | 1.97 | 0.59 | 0.81 | — | 7285 | 931 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7E0J | 30934 | 2023-12-08 | 2021-01-28 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8140 | 672 | 6 | 0 | 56 | 0 | 0 | logfile |
✔ | 8BGU | 16036 | 2023-12-07 | 2022-10-28 | 4.1 | 5.77 | 3.97 | 4.0 | 0.003 | 0.84 | 0.0 | 0.04 | 22.59 | 0.00 | 2.235 | 4.09 | 0.00 | 5.0 | 95.0 | 0.0 | -2.58 | 0.92 | 0.86 | — | 4.0 | 0.005 | 0.67 | 0.0 | 0.04 | 23.20 | 0.00 | 2.048 | 27.39 | 0.00 | 11.8 | 88.2 | 0.0 | -1.21 | 2.45 | 0.92 | 0.88 | — | 4779 | 447 | 5 | 121 | 1 | 0 | 0 | logfile |
✔ | 6XMG | 22258 | 2023-12-08 | 2020-06-30 | 4.8 | 8.26 | — | 3.9 | 0.002 | 0.53 | 0.0 | 0.03 | 20.81 | 0.00 | 2.187 | 10.77 | 0.00 | 6.7 | 93.3 | 0.0 | -2.01 | 0.90 | 0.74 | — | 3.4 | 0.005 | 0.82 | 0.0 | 0.04 | 22.40 | 0.01 | 1.908 | 49.19 | 0.20 | 11.5 | 88.5 | 0.0 | -2.34 | 1.33 | 0.90 | 0.78 | — | 8361 | 638 | 4 | 154 | 1 | 0 | 0 | logfile |
✔ | 8i7N | 35223 | 2023-12-08 | 2023-02-01 | 2.98 | 3.12 | 2.92 | 3.0 | 0.006 | 0.66 | 0.0 | 0.04 | 22.00 | 0.00 | 1.982 | 2.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.82 | 0.83 | — | 3.0 | 0.008 | 0.74 | 0.0 | 0.04 | 21.93 | 0.01 | 1.938 | 5.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.88 | 0.92 | — | 8979 | 0 | 1 | 418 | 29 | 0 | 0 | logfile |
✔ | 5FN4 | 3239 | 2023-12-09 | 2015-11-10 | 4.0 | 4.24 | — | 4.2 | 0.010 | 1.71 | 17.0 | 0.10 | 18.07 | 0.01 | 2.131 | 10.17 | 10.51 | 12.0 | 84.8 | 3.2 | -1.44 | 0.61 | 0.55 | — | 4.1 | 0.004 | 0.89 | 0.0 | 0.05 | 17.23 | 0.01 | 2.157 | 20.48 | 0.57 | 7.4 | 91.9 | 0.6 | -0.37 | 1.73 | 0.69 | 0.79 | — | 9776 | 1250 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TBY | 25801 | 2023-12-10 | 2021-12-22 | 4.0 | 4.05 | 3.80 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 13.87 | 0.00 | 2.155 | 7.36 | 0.00 | 5.0 | 95.0 | 0.0 | -2.45 | 0.70 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13281 | 1788 | 4 | 0 | 10 | 0 | 0 | logfile |
✘ | 6QCM | 4508 | 2023-12-07 | 2018-12-28 | 4.21 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 5FN3 | 3238 | 2023-12-09 | 2015-11-10 | 4.1 | 4.53 | — | 4.1 | 0.011 | 1.81 | 26.0 | 0.10 | 18.64 | 0.01 | 1.021 | 20.42 | 11.34 | 10.7 | 85.3 | 4.0 | -1.54 | 0.66 | 0.60 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.04 | 13.92 | 0.01 | 2.063 | 18.67 | 0.00 | 8.4 | 90.6 | 1.0 | -0.49 | 2.22 | 0.71 | 0.79 | — | 10291 | 1318 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U2A | 26310 | 2023-12-08 | 2022-02-23 | 4.1 | 3.51 | — | 4.0 | 0.010 | 1.05 | 0.0 | 0.05 | 17.76 | 0.00 | 1.918 | 11.25 | 0.31 | 0.5 | 99.5 | 0.0 | 2.04 | 0.59 | 0.61 | — | 4.0 | 0.005 | 0.73 | 0.0 | 0.04 | 17.66 | 0.00 | 2.125 | 15.70 | 0.00 | 2.8 | 97.2 | 0.0 | -0.11 | 1.67 | 0.66 | 0.73 | — | 6855 | 761 | 5 | 38 | 2 | 0 | 0 | logfile |
✔ | 8G88 | 29843 | 2023-12-10 | 2023-02-17 | 4.8 | 7.18 | 4.63 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 27.72 | 0.00 | 2.275 | 7.12 | 0.93 | 1.0 | 99.0 | 0.0 | 1.45 | 0.78 | 0.60 | — | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 28.84 | 0.00 | 2.054 | 24.68 | 0.00 | 2.5 | 97.5 | 0.0 | 1.35 | 1.98 | 0.91 | 0.81 | — | 13995 | 891 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 7RRA | 24657 | 2023-12-09 | 2021-08-09 | 4.4 | 4.79 | — | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.261 | 9.42 | 0.00 | 3.0 | 97.0 | 0.0 | 1.98 | 0.62 | 0.57 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.95 | 0.00 | 2.142 | 14.85 | 0.00 | 4.1 | 95.9 | 0.0 | 1.58 | 1.89 | 0.65 | 0.62 | — | 9608 | 1204 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQT | 25394 | 2023-12-07 | 2021-11-06 | 4.0 | 7.13 | 4.01 | 3.5 | 0.010 | 0.70 | 0.0 | 0.05 | 15.78 | 0.01 | 0.902 | 2.31 | 1.25 | 2.5 | 97.5 | 0.0 | 1.39 | 0.94 | 0.84 | — | 3.4 | 0.003 | 0.76 | 0.0 | 0.04 | 15.49 | 0.00 | 2.135 | 11.69 | 0.18 | 2.3 | 97.7 | 0.0 | 1.50 | 3.03 | 0.93 | 0.86 | — | 107136 | 13752 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NT7 | 0504 | 2023-12-07 | 2019-01-28 | 4.0 | 4.27 | — | 4.1 | 0.008 | 0.90 | 0.0 | 0.05 | 14.87 | 0.01 | 2.238 | 5.64 | 0.00 | 6.2 | 93.8 | 0.0 | -3.29 | 0.75 | 0.85 | — | 4.1 | 0.004 | 0.64 | 0.0 | 0.04 | 16.26 | 0.00 | 2.197 | 9.51 | 0.20 | 3.2 | 96.8 | 0.0 | 0.95 | 1.19 | 0.75 | 0.85 | — | 4729 | 588 | 3 | 0 | 1 | 0 | 0 | logfile |