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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6YP7 | 10865 | 2024-03-16 | 2020-04-15 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71784 | 7002 | 77 | 0 | 325 | 0 | 0 | logfile |
✘ | 6YMX | 10847 | 2024-03-25 | 2020-04-10 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 47034 | 5759 | 47 | 0 | 38 | 0 | 0 | logfile |
✘ | 7RH7 | 24457 | 2024-03-19 | 2021-07-16 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93207 | 6072 | 44 | 0 | 64 | 0 | 44381 | logfile |
✘ | 8Hii | 34817 | 2024-03-11 | 2022-11-20 | 3.57 | 2.49 | 3.54 | 3.0 | 0.004 | 0.80 | 0.0 | 0.05 | 9.45 | 0.01 | 2.260 | 3.48 | 0.00 | 5.4 | 94.6 | 0.0 | -3.43 | 0.72 | 0.70 | 2.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8212 | 1055 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6JP5 | 9866 | 2024-03-18 | 2019-03-25 | 2.9 | 3.03 | — | 3.1 | 0.016 | 1.54 | 4.0 | 0.13 | 16.26 | 0.01 | 1.921 | 28.83 | 6.11 | 7.7 | 91.7 | 0.6 | -3.65 | 0.56 | 0.62 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22068 | 2694 | 14 | 0 | 39 | 0 | 0 | logfile |
✘ | 6U9V | 20702 | 2024-03-20 | 2019-09-09 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26701 | 1680 | 15 | 3 | 54 | 0 | 12634 | logfile |
✘ | 7BGi | 12180 | 2024-03-26 | 2021-01-07 | 2.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52213 | 4370 | 59 | 0 | 354 | 337 | 0 | logfile |
✘ | 7UB5 | 26435 | 2024-03-19 | 2022-03-14 | 3.35 | 3.64 | 3.34 | 3.5 | 0.004 | 0.67 | 0.0 | 0.05 | 13.35 | 0.01 | 2.287 | 3.61 | 0.00 | 3.5 | 96.5 | 0.0 | -0.85 | 0.85 | 0.87 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24923 | 3104 | 16 | 0 | 47 | 0 | 0 | logfile |
✘ | 7M5Y | 23685 | 2024-03-17 | 2021-03-25 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15447 | 1000 | 1 | 0 | 24 | 8 | 7534 | logfile |
✘ | 6UiW | 20789 | 2024-03-19 | 2019-10-01 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23617 | 3234 | 22 | 0 | 11 | 0 | 0 | logfile |
✘ | 7WTM | 32791 | 2024-03-24 | 2022-02-05 | 3.5 | 3.32 | — | 3.2 | 0.006 | 0.89 | 0.0 | 0.05 | 21.84 | 0.01 | 2.110 | 6.36 | 0.00 | 7.6 | 92.4 | 0.1 | -1.86 | 0.80 | 0.78 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44623 | 2651 | 18 | 1106 | 1 | 0 | 0 | logfile |
✘ | 8DJM | 27461 | 2024-03-11 | 2022-07-01 | 3.23 | 3.66 | 3.31 | 3.6 | 0.029 | 1.53 | 2.0 | 1.04 | 32.65 | 0.00 | 1.844 | 8.23 | 0.82 | 3.7 | 96.3 | 0.0 | -2.26 | 0.49 | 0.75 | 3.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7032 | 862 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 8EoS | 28466 | 2024-03-19 | 2022-10-04 | 3.1 | 3.84 | 3.11 | 3.5 | 0.005 | 0.57 | 0.0 | 0.04 | 15.24 | 0.00 | 1.840 | 20.11 | 3.59 | 5.2 | 94.7 | 0.2 | -0.81 | 0.90 | 0.89 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25606 | 3069 | 11 | 87 | 5 | 0 | 0 | logfile |
✘ | 6WDR | 21644 | 2024-03-16 | 2020-04-01 | 3.7 | 3.72 | — | 3.4 | 0.013 | 1.27 | 2.0 | 0.07 | 23.90 | 0.01 | 2.181 | 8.79 | 1.35 | 11.7 | 88.2 | 0.1 | -5.01 | 0.85 | 0.81 | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 74473 | 4984 | 32 | 1647 | 0 | 0 | 0 | logfile |
✘ | 7M5V | 23683 | 2024-03-17 | 2021-03-24 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16295 | 1046 | 1 | 0 | 24 | 6 | 7985 | logfile |
✘ | 7SPi | 24771 | 2024-03-11 | 2021-11-02 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7XE4 | 33154 | 2024-03-15 | 2022-03-29 | 3.4 | 3.88 | — | 3.8 | 0.006 | 0.86 | 0.0 | 0.04 | 15.21 | 0.01 | 2.199 | 8.78 | 0.45 | 10.0 | 89.6 | 0.4 | -2.45 | 0.71 | 0.84 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12529 | 1503 | 3 | 0 | 27 | 0 | 0 | logfile |
✘ | 6U0N | 20608 | 2024-03-18 | 2019-08-14 | 3.5 | 3.79 | — | 3.6 | 0.008 | 0.91 | 0.0 | 0.06 | 15.22 | 0.01 | 2.242 | 6.72 | 0.56 | 9.6 | 90.3 | 0.1 | -5.29 | 0.79 | 0.83 | 2.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19322 | 2489 | 23 | 0 | 43 | 0 | 0 | logfile |
✘ | 8APE | 15567 | 2024-03-16 | 2022-08-09 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126495 | 7873 | 60 | 0 | 36 | 0 | 62392 | logfile |
✘ | 7K0K | 22600 | 2024-03-11 | 2020-09-04 | 2.6 | 2.96 | — | 2.9 | 0.006 | 0.68 | 0.0 | 0.05 | 12.49 | 0.00 | 1.915 | 7.43 | 0.00 | 2.2 | 97.8 | 0.0 | 0.53 | 0.68 | 0.85 | 4.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7615 | 964 | 4 | 0 | 2 | 0 | 0 | logfile |