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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7WPA | 32680 | 2023-04-29 | 2022-01-23 | 2.77 | 2.26 | — | 2.1 | 0.004 | 0.78 | 2.0 | 0.05 | 14.25 | 0.01 | 2.327 | 3.39 | 0.45 | 5.4 | 94.5 | 0.0 | -4.08 | 0.72 | 0.73 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30444 | 3774 | 20 | 0 | 47 | 0 | 0 | logfile |
✘ | 8APD | 15566 | 2023-04-27 | 2022-08-09 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126495 | 7873 | 60 | 0 | 36 | 0 | 62392 | logfile |
✘ | 7JRo | 22447 | 2023-04-22 | 2020-08-12 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12747 | 1492 | 17 | 0 | 26 | 0 | 0 | logfile |
✘ | 7PNK | 13548 | 2023-04-21 | 2021-09-07 | 3.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60673 | 6142 | 74 | 0 | 250 | 0 | 0 | logfile |
✘ | 7WK0 | 32554 | 2023-04-21 | 2022-01-08 | 3.32 | 2.37 | — | 2.2 | 0.004 | 0.65 | 0.0 | 0.04 | 11.04 | 0.01 | 2.233 | 9.59 | 7.71 | 12.2 | 87.5 | 0.2 | -4.96 | 0.75 | 0.75 | 3.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9724 | 1264 | 8 | 0 | 2 | 0 | 0 | logfile |
✘ | 8APC | 15565 | 2023-04-27 | 2022-08-09 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126495 | 7873 | 59 | 0 | 36 | 0 | 62392 | logfile |
✘ | 7R8o | 24320 | 2023-04-29 | 2021-06-26 | 3.5 | 3.86 | — | 3.9 | 0.008 | 1.48 | 13.0 | 0.09 | 12.90 | 0.02 | 1.876 | 11.98 | 1.03 | 3.6 | 96.3 | 0.1 | -0.25 | 0.71 | 0.80 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29964 | 3804 | 20 | 0 | 48 | 0 | 0 | logfile |
✘ | 8APH | 15571 | 2023-04-27 | 2022-08-09 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126490 | 7873 | 60 | 0 | 36 | 0 | 62387 | logfile |
✘ | 6XM3 | 22254 | 2023-04-27 | 2020-06-29 | 2.9 | 3.02 | 2.92 | 3.0 | 0.013 | 1.03 | 3.0 | 0.07 | 14.51 | 0.01 | 2.233 | 3.36 | 0.66 | 7.4 | 92.5 | 0.2 | -4.38 | 0.66 | 0.86 | 3.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25384 | 3143 | 23 | 0 | 60 | 0 | 0 | logfile |
✘ | 6PoM | 20416 | 2023-04-20 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✘ | 7DBH | 30631 | 2023-04-21 | 2020-10-20 | 3.6 | 4.18 | — | 3.4 | 0.007 | 0.74 | 1.0 | 0.05 | 28.88 | 0.00 | 1.451 | 11.99 | 0.17 | 3.2 | 96.8 | 0.0 | 0.54 | 0.91 | 0.85 | 2.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10631 | 697 | 10 | 252 | 0 | 0 | 0 | logfile |
✘ | 7oZS | 13134 | 2023-04-22 | 2021-06-28 | 3.5 | 4.00 | — | 3.6 | 0.004 | 0.79 | 0.0 | 0.05 | 13.79 | 0.01 | 2.282 | 3.82 | 0.29 | 3.7 | 96.3 | 0.0 | -1.44 | 0.89 | 0.85 | 2.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12770 | 1314 | 7 | 119 | 23 | 0 | 0 | logfile |
✘ | 7XTC | 33446 | 2023-04-23 | 2022-05-16 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16301 | 1038 | 5 | 0 | 2 | 0 | 8097 | logfile |
✘ | 8APK | 15573 | 2023-04-27 | 2022-08-09 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126493 | 7873 | 61 | 0 | 36 | 0 | 62392 | logfile |
✘ | 8ENN | 28274 | 2023-04-24 | 2022-09-30 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16749 | 1974 | 12 | 0 | 9 | 858 | 0 | logfile |
✘ | 7WPB | 32681 | 2023-04-20 | 2022-01-23 | 2.79 | 2.94 | — | 2.9 | 0.005 | 0.74 | 0.0 | 0.05 | 15.22 | 0.01 | 2.101 | 3.78 | 0.29 | 3.0 | 97.0 | 0.0 | -4.67 | 0.68 | 0.86 | 4.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6491 | 793 | 2 | 0 | 5 | 0 | 0 | logfile |
✘ | 8APB | 15564 | 2023-04-27 | 2022-08-09 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 126495 | 7873 | 61 | 0 | 36 | 0 | 62392 | logfile |
✘ | 6RDZ | 4836 | 2023-04-20 | 2019-04-12 | 3.5 | 3.36 | — | 3.4 | 0.009 | 0.96 | 1.0 | 0.06 | 14.94 | 0.01 | 1.846 | 6.04 | 0.43 | 5.4 | 94.4 | 0.2 | -4.22 | 0.69 | 0.82 | 2.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✘ | 6HUo | 0282 | 2023-04-23 | 2018-10-09 | 3.26 | 3.38 | 3.25 | 3.3 | 0.006 | 0.89 | 0.0 | 0.06 | 8.62 | 0.01 | 2.257 | 4.69 | 0.00 | 3.8 | 96.2 | 0.0 | -4.15 | 0.74 | 0.83 | 4.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15227 | 1808 | 16 | 0 | 35 | 0 | 0 | logfile |
✘ | 5Z96 | 6901 | 2023-04-25 | 2018-02-02 | 3.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21494 | 2665 | 8 | 0 | 13 | 0 | 0 | logfile |