The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6N4Q | 0341 | 2022-05-14 | 2018-11-20 | 3.6 | 4.01 | 3.86 | 4.0 | 0.008 | 1.03 | 0.0 | 0.06 | 10.17 | 0.01 | 2.288 | 4.10 | 0.11 | 7.9 | 92.1 | 0.0 | -3.41 | 0.57 | 0.73 | 1.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16358 | 2052 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 6CRV | 7573 | 2022-05-14 | 2018-03-19 | 3.2 | 3.31 | 3.17 | 3.3 | 0.013 | 1.07 | 0.0 | 0.06 | 8.91 | 0.01 | 2.170 | 4.43 | 0.26 | 4.1 | 95.9 | 0.0 | -3.09 | 0.74 | 0.81 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21036 | 2643 | 6 | 0 | 39 | 0 | 0 | logfile |
✔ | 3J4P | 5681 | 2022-05-05 | 2013-09-10 | 4.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 254580 | 31020 | 60 | 0 | 180 | 60 | 0 | logfile |
✘ | 5ZJi | 6932 | 2022-05-17 | 2018-03-20 | 3.3 | 3.39 | — | 3.4 | 0.012 | 1.45 | 0.0 | 0.11 | 16.67 | 0.01 | 1.204 | 8.01 | 0.45 | 6.4 | 93.6 | 0.0 | -3.56 | 0.68 | 0.84 | 3.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44708 | 4087 | 40 | 0 | 271 | 0 | 0 | logfile |
✘ | 6DR2 | 7988 | 2022-05-17 | 2018-06-11 | 4.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 139084 | 8764 | 8 | 0 | 12 | 0 | 69544 | logfile |
✘ | 6CP5 | 7547 | 2022-05-13 | 2018-03-13 | 4.2 | 4.19 | — | 4.2 | 0.004 | 0.84 | 0.0 | 0.04 | 10.90 | 0.00 | 1.205 | 24.08 | 2.24 | 7.2 | 92.0 | 0.8 | -4.36 | 0.50 | 0.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9413 | 1234 | 19 | 0 | 4 | 0 | 0 | logfile |
✘ | 6P7N | 20267 | 2022-05-17 | 2019-06-06 | 4.9 | 9.02 | 6.14 | 4.9 | 0.002 | 0.53 | 0.0 | 0.04 | 14.46 | 0.00 | 2.152 | 6.68 | 1.33 | 5.6 | 94.4 | 0.0 | -3.30 | 0.81 | 0.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20356 | 2352 | 10 | 52 | 4 | 0 | 0 | logfile |
✘ | 5ooD | 3837 | 2022-05-13 | 2017-08-07 | 3.7 | 3.73 | 3.79 | 3.7 | 0.016 | 1.63 | 0.0 | 0.07 | 12.61 | 0.02 | 1.149 | 8.01 | 0.00 | 5.5 | 92.0 | 2.5 | -1.71 | 0.63 | 0.81 | 2.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14910 | 1855 | 10 | 0 | 20 | 0 | 0 | logfile |
✘ | 6J6G | 0686 | 2022-05-15 | 2019-01-15 | 3.2 | 3.37 | — | 3.2 | 0.007 | 0.94 | 0.0 | 0.06 | 14.13 | 0.01 | 1.463 | 15.59 | 3.03 | 4.6 | 94.9 | 0.5 | -3.38 | 0.67 | 0.71 | 2.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 79042 | 8981 | 47 | 550 | 14 | 0 | 0 | logfile |
✘ | 6o2P | 0611 | 2022-05-13 | 2019-02-24 | 3.3 | 3.80 | — | 3.8 | 0.014 | 1.82 | 0.0 | 0.09 | 14.02 | 0.00 | 1.403 | 1.52 | 1.16 | 4.5 | 95.5 | 0.0 | -3.17 | 0.51 | 0.72 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9767 | 1179 | 3 | 0 | 29 | 0 | 0 | logfile |
✘ | 6PZZ | 20541 | 2022-05-14 | 2019-08-01 | 3.6 | 4.09 | 3.67 | 3.9 | 0.024 | 1.88 | 0.0 | 0.11 | 10.23 | 0.01 | 2.292 | 1.95 | 0.00 | 2.8 | 97.0 | 0.2 | 0.57 | 0.80 | 0.85 | 4.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19772 | 2464 | 16 | 0 | 48 | 0 | 0 | logfile |
✘ | 5MPS | 3539 | 2022-05-13 | 2016-12-18 | 3.85 | 4.03 | — | 3.9 | 0.008 | 1.40 | 13.0 | 0.09 | 15.52 | 0.01 | 1.421 | 7.76 | 2.50 | 8.5 | 90.6 | 0.9 | -2.11 | 0.73 | 0.82 | 1.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58929 | 6718 | 36 | 339 | 99 | 0 | 0 | logfile |
✔ | 6V1Z | 21020 | 2022-05-05 | 2019-11-21 | 3.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 250920 | 31260 | 120 | 120 | 0 | 0 | 0 | logfile |
✘ | 5W9o | 8790 | 2022-05-16 | 2017-06-23 | 4.5 | 4.59 | 4.45 | 4.5 | 0.013 | 1.66 | 0.0 | 0.08 | 10.49 | 0.01 | 1.325 | 8.19 | 0.08 | 3.9 | 95.4 | 0.7 | 1.29 | 0.73 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32958 | 4257 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 5MM2 | 3528 | 2022-05-12 | 2016-12-08 | 2.7 | 12.53 | 1.51 | — | 0.011 | 1.29 | 0.0 | 0.07 | 10.78 | 0.01 | 1.325 | 19.80 | 0.54 | 12.1 | 87.0 | 0.8 | -3.96 | -0.08 | -0.03 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6605 | 854 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6i7T | 4428 | 2022-05-17 | 2018-11-17 | 4.61 | 4.75 | 4.92 | 4.6 | 0.006 | 1.17 | 6.0 | 0.07 | 13.63 | 0.01 | 2.245 | 7.14 | 2.54 | 12.0 | 87.5 | 0.4 | -4.32 | 0.74 | 0.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37004 | 4682 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6N7R | 0361 | 2022-05-17 | 2018-11-28 | 3.2 | 3.34 | — | 3.3 | 0.017 | 1.37 | 6.0 | 0.08 | 15.58 | 0.01 | 1.205 | 6.64 | 4.50 | 4.8 | 94.8 | 0.4 | -2.74 | 0.75 | 0.84 | 3.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35750 | 2908 | 19 | 568 | 91 | 0 | 0 | logfile |
✘ | 6M1D | 30041 | 2022-05-14 | 2020-02-25 | 4.5 | 6.53 | — | 4.6 | 0.005 | 1.20 | 0.0 | 0.06 | 18.16 | 0.01 | 2.043 | 20.71 | 9.51 | 9.3 | 89.8 | 0.9 | -5.09 | 0.69 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21776 | 2706 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PNJ | 20397 | 2022-05-14 | 2019-07-02 | 3.19 | 3.33 | — | 3.3 | 0.032 | 3.36 | 0.0 | 0.10 | 20.00 | 0.02 | 1.200 | 8.95 | 0.94 | 6.1 | 93.8 | 0.1 | -5.97 | 0.76 | 0.86 | 3.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71511 | 6660 | 60 | 0 | 420 | 0 | 0 | logfile |
✘ | 6JGZ | 9824 | 2022-05-13 | 2019-02-16 | 4.6 | 4.96 | — | 4.6 | 0.007 | 1.13 | 0.0 | 0.06 | 11.54 | 0.01 | 2.171 | 12.08 | 0.73 | 11.3 | 88.3 | 0.4 | -4.06 | 0.78 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 109824 | 14368 | 12 | 0 | 4 | 0 | 0 | logfile |