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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7K9X | 22755 | 2023-02-19 | 2020-09-29 | 3.8 | 3.44 | — | 3.7 | 0.008 | 0.96 | 0.0 | 0.05 | 15.20 | 0.01 | 2.254 | 6.36 | 6.12 | 3.8 | 96.2 | 0.0 | -1.99 | 0.79 | 0.81 | 0.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6BBM | 7076 | 2023-02-24 | 2017-10-18 | 4.1 | 4.24 | — | 4.1 | 0.008 | 1.20 | 0.0 | 0.06 | 16.70 | 0.01 | 2.231 | 9.86 | 0.58 | 13.8 | 86.1 | 0.2 | -5.97 | 0.74 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23956 | 2662 | 15 | 0 | 623 | 0 | 0 | logfile |
✘ | 7MiY | 23868 | 2023-02-23 | 2021-04-18 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21483 | 2598 | 10 | 0 | 28 | 0 | 0 | logfile |
✘ | 6QVC | 4647 | 2023-02-19 | 2019-03-01 | 4.0 | 4.37 | 3.88 | 4.1 | 0.008 | 1.47 | 0.0 | 0.08 | 11.98 | 0.01 | 2.232 | 8.87 | 2.19 | 8.4 | 91.1 | 0.5 | -3.90 | 0.67 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9272 | 1198 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PW6 | 20500 | 2023-02-21 | 2019-07-22 | 4.5 | 4.56 | 4.36 | 4.5 | 0.021 | 1.78 | 0.0 | 0.11 | 10.80 | 0.01 | 2.200 | 1.61 | 0.56 | 2.7 | 97.2 | 0.2 | 0.50 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15942 | 1842 | 45 | 0 | 108 | 0 | 0 | logfile |
✘ | 7N7P | 24230 | 2023-02-17 | 2021-06-10 | 3.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5400 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 5LJV | 4062 | 2023-02-21 | 2016-07-21 | 3.64 | 3.75 | — | 3.7 | 0.030 | 2.85 | 85.0 | 0.16 | 18.81 | 0.02 | 2.070 | 21.28 | 11.82 | 7.4 | 89.7 | 2.9 | -4.53 | 0.71 | 0.84 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15000 | 1950 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 6WB0 | 21583 | 2023-02-18 | 2020-03-26 | 4.2 | 4.26 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.69 | 0.00 | 2.131 | 11.89 | 0.81 | 4.1 | 95.9 | 0.0 | -4.46 | 0.79 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8518 | 948 | 4 | 77 | 0 | 0 | 0 | logfile |
✘ | 6oUA | 20200 | 2023-02-17 | 2019-05-04 | 4.18 | 4.32 | — | 4.3 | 0.008 | 1.37 | 1.0 | 0.07 | 13.97 | 0.01 | 2.294 | 7.03 | 2.35 | 17.4 | 82.3 | 0.3 | -5.89 | 0.72 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5208 | 637 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6LHS | 0896 | 2023-02-24 | 2019-12-10 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22737 | 1456 | 2 | 0 | 0 | 0 | 11313 | logfile |
✘ | 7V7N | 31775 | 2023-02-25 | 2021-08-21 | 2.9 | 3.77 | — | 3.2 | 0.004 | 0.55 | 0.0 | 0.05 | 13.44 | 0.00 | 2.171 | 6.62 | 0.00 | 5.4 | 94.4 | 0.1 | 0.11 | 0.89 | 0.87 | 2.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25430 | 3101 | 42 | 0 | 85 | 0 | 0 | logfile |
✘ | 6VM3 | 21237 | 2023-02-21 | 2020-01-27 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15180 | 1810 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 7VKT | 32018 | 2023-02-19 | 2021-10-01 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9100 | 1143 | 6 | 0 | 6 | 7 | 0 | logfile |
✘ | 7UL4 | 26591 | 2023-02-16 | 2022-04-03 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2524 | 351 | 3 | 0 | 1 | 4 | 0 | logfile |
✘ | 8DNC | 27563 | 2023-02-20 | 2022-07-11 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10672 | 1300 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 7RE1 | 24430 | 2023-02-24 | 2021-07-12 | 2.91 | 3.29 | — | 3.2 | 0.006 | 0.73 | 0.0 | 0.13 | 14.43 | 0.00 | 1.787 | 8.02 | 8.69 | 6.0 | 94.0 | 0.0 | -1.74 | 0.70 | 0.74 | 3.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21825 | 2553 | 19 | 71 | 19 | 137 | 0 | logfile |
✘ | 7DXF | 30907 | 2023-02-24 | 2021-01-18 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22940 | 2740 | 8 | 0 | 40 | 0 | 0 | logfile |
✘ | 6PYH | 20524 | 2023-02-20 | 2019-07-29 | 4.3 | 4.52 | — | 4.3 | 0.016 | 1.05 | 0.0 | 0.05 | 14.64 | 0.01 | 2.079 | 28.75 | 0.55 | 18.2 | 81.6 | 0.2 | -5.21 | 0.84 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13187 | 1648 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8DJK | 27460 | 2023-02-18 | 2022-06-30 | 3.33 | 3.77 | 3.32 | 3.7 | 0.029 | 1.52 | 1.0 | 1.03 | 15.27 | 0.01 | 1.327 | 7.25 | 0.82 | 5.0 | 95.0 | 0.0 | -1.84 | 0.48 | 0.73 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7091 | 870 | 7 | 0 | 8 | 0 | 0 | logfile |
✘ | 6ZWo | 11492 | 2023-02-25 | 2020-07-28 | 3.0 | 3.30 | 3.09 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 14.53 | 0.00 | 2.167 | 6.24 | 1.26 | 3.7 | 96.3 | 0.0 | -2.70 | 0.70 | 0.84 | 1.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24994 | 3126 | 7 | 0 | 5 | 0 | 0 | logfile |