Table showing results for December 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7ETo	31301	2022-12-19	2021-05-13	4.0	3.89	—	4.0	0.007	0.94	0.0	0.06	14.66	0.01	2.228	7.32	0.70	6.6	93.4	0.0	-4.12	0.40	0.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	98674	12386	26	0	0	0	0	logfile
✘	6WMU	21853	2022-12-18	2020-04-21	3.18	3.31	—	3.3	0.016	1.01	1.0	0.06	18.72	0.01	2.066	21.31	9.93	11.7	88.0	0.3	-3.75	0.66	0.77	1.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	34094	4121	13	86	3	0	0	logfile
✘	6ZKS	11260	2022-12-19	2020-06-30	3.1	2.60	—	2.9	0.007	0.99	0.0	1.03	11.39	0.01	2.218	6.07	0.10	3.9	96.1	0.0	-3.09	0.57	0.78	3.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	66294	8070	67	0	36	0	0	logfile
✘	7D1U	30548	2022-12-22	2020-09-15	2.08	1.94	2.04	2.0	0.018	1.83	27.0	0.10	18.50	0.02	1.202	4.10	3.09	2.3	97.5	0.2	-1.36	0.74	0.87	6.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	52655	5312	106	0	196	2121	0	logfile
✘	7AS8	11889	2022-12-19	2020-10-27	2.9	3.61	2.93	3.1	0.011	0.94	0.0	0.05	15.51	0.01	1.949	4.15	0.03	8.7	91.2	0.2	-3.78	0.91	0.90	3.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	93801	3810	33	2997	0	0	0	logfile
✘	7KC2	22805	2022-12-18	2020-10-04	2.67	3.44	—	3.4	0.008	0.70	0.0	0.05	13.47	0.00	2.216	9.56	0.00	5.2	94.8	0.0	-2.73	0.76	0.82	3.71	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10192	1388	12	0	12	4	0	logfile
✘	6XP5	22284	2022-12-18	2020-07-08	4.2	4.73	—	4.3	0.004	0.90	0.0	0.05	14.32	0.00	2.131	15.02	0.27	15.9	83.2	0.9	-5.23	0.79	0.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21065	2707	15	0	221	0	0	logfile
✘	6VXZ	21453	2022-12-18	2020-02-25	3.42	3.56	3.37	3.6	0.011	1.06	0.0	0.06	19.90	0.01	1.959	12.76	2.40	8.1	91.9	0.0	-3.97	0.71	0.81	1.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13324	1556	8	0	28	0	0	logfile
✘	6LQA	0942	2022-12-18	2020-01-13	3.3	3.51	—	3.5	0.008	1.28	0.0	0.07	14.15	0.01	1.369	15.42	6.02	7.8	91.4	0.9	-4.09	0.56	0.77	2.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9387	1151	1	0	10	0	0	logfile
✘	7LL2	23412	2022-12-19	2021-02-03	3.73	4.36	3.97	3.8	0.013	1.77	3.0	0.10	13.21	0.02	2.531	0.77	0.63	5.9	93.7	0.4	-0.81	0.82	0.76	2.65	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25512	3060	48	0	132	0	0	logfile
✘	6URT	20862	2022-12-18	2019-10-24	3.27	4.11	—	3.7	0.008	1.36	1.0	0.06	17.78	0.01	2.285	7.74	3.41	9.0	91.0	0.0	-4.88	0.73	0.83	2.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18263	2317	14	0	7	0	0	logfile
✘	6TRC	10558	2022-12-19	2019-12-18	2.98	3.06	—	3.1	0.010	1.16	0.0	0.07	19.32	0.02	1.220	9.53	1.42	7.9	92.1	0.0	-3.92	0.71	0.79	3.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	75591	6849	99	0	402	651	0	logfile
✘	7K5X	22683	2022-12-18	2020-09-17	2.93	3.28	—	3.2	0.004	0.60	0.0	0.04	26.42	0.00	2.211	5.82	0.09	2.2	97.8	0.0	1.31	0.76	0.82	3.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18291	1296	13	394	0	0	0	logfile
✘	7CKR	30391	2022-12-18	2020-07-18	3.0	3.32	—	3.4	0.009	1.22	9.0	0.09	17.22	0.01	1.896	18.48	11.04	8.0	91.9	0.2	-2.89	0.45	0.60	2.22	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4094	597	3	0	1	0	0	logfile
✘	6PLV	20377	2022-12-18	2019-07-01	3.3	3.42	—	3.4	0.010	1.05	0.0	0.06	9.18	0.01	1.521	4.41	0.00	5.6	94.4	0.0	-5.00	0.68	0.84	4.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14655	1725	15	0	75	0	0	logfile
✘	7AoD	11841	2022-12-19	2020-10-14	4.5	4.61	—	4.5	0.007	0.89	0.0	0.05	14.84	0.01	1.858	27.44	1.95	10.7	88.9	0.3	-4.20	0.79	0.75	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	59256	7466	34	0	12	0	0	logfile
✘	7CKZ	30395	2022-12-18	2020-07-20	3.1	3.23	—	3.2	0.003	0.52	0.0	0.04	13.75	0.00	1.570	23.13	0.93	3.1	96.9	0.0	-3.38	0.59	0.71	2.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8133	1037	5	0	3	0	0	logfile
✘	7KDK	22825	2022-12-18	2020-10-08	2.8	3.18	—	3.1	0.013	1.77	8.0	0.10	12.82	0.01	2.490	0.43	0.12	5.2	94.7	0.1	-0.98	0.75	0.77	3.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23688	2916	21	0	63	0	0	logfile
✔	7MKQ	23903	2022-12-18	2021-04-26	4.8	4.92	—	4.8	0.004	0.91	1.0	0.05	15.07	0.01	2.010	16.97	1.16	7.0	92.6	0.4	-2.42	0.81	0.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	32822	4182	7	0	3	0	0	logfile
✘	7oF0	12865	2022-12-19	2021-05-04	2.2	3.01	2.23	2.8	0.005	0.59	0.0	0.04	14.90	0.00	1.851	7.50	0.08	2.7	97.3	0.0	1.19	0.86	0.87	3.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	99476	8446	62	1432	64	0	0	logfile

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