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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6S1N | 10081 | 2023-04-25 | 2019-06-19 | 4.86 | 4.98 | — | 4.8 | 0.009 | 1.13 | 2.0 | 0.06 | 17.87 | 0.01 | 1.929 | 9.59 | 0.83 | 6.3 | 93.4 | 0.4 | -3.47 | 0.73 | 0.53 | — | 4.8 | 0.003 | 0.76 | 0.0 | 0.04 | 16.36 | 0.00 | 2.138 | 16.34 | 0.00 | 4.6 | 95.3 | 0.0 | -0.83 | 3.65 | 0.83 | 0.73 | — | 19726 | 2399 | 11 | 50 | 3 | 0 | 0 | logfile |
✔ | 6HE4 | 0209 | 2023-04-22 | 2018-08-20 | 4.85 | 4.88 | — | 4.8 | 0.036 | 3.65 | 111.0 | 0.21 | 18.70 | 0.03 | 1.953 | 1.83 | 3.66 | 6.4 | 89.5 | 4.1 | -2.84 | 0.55 | 0.56 | — | 4.8 | 0.005 | 1.03 | 0.0 | 0.05 | 14.57 | 0.01 | 1.807 | 30.94 | 0.00 | 8.2 | 91.1 | 0.7 | -1.51 | 2.38 | 0.59 | 0.77 | — | 12684 | 1602 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 7NK2 | 12429 | 2023-04-28 | 2021-02-17 | 4.84 | 4.93 | — | 4.8 | 0.004 | 0.73 | 2.0 | 0.05 | 13.61 | 0.01 | 1.907 | 8.81 | 0.32 | 4.3 | 95.7 | 0.0 | -0.71 | 0.61 | 0.43 | — | 4.8 | 0.005 | 0.80 | 0.0 | 0.04 | 13.93 | 0.01 | 1.842 | 25.56 | 0.00 | 9.2 | 90.8 | 0.0 | -1.77 | 4.62 | 0.74 | 0.69 | — | 28776 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 6LHW | 0901 | 2023-04-22 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.027 | 44.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 7NJ7 | 12375 | 2023-04-28 | 2021-02-16 | 4.82 | 5.23 | — | 4.8 | 0.004 | 0.73 | 1.0 | 0.04 | 13.69 | 0.01 | 1.907 | 8.72 | 0.19 | 4.3 | 95.7 | 0.0 | -0.72 | 0.74 | 0.46 | — | 4.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.68 | 0.00 | 1.834 | 21.16 | 0.06 | 5.5 | 94.5 | 0.0 | -0.86 | 2.33 | 0.82 | 0.64 | — | 28818 | 1797 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7A96 | 11686 | 2023-04-29 | 2020-09-01 | 4.8 | 5.70 | 4.94 | 4.9 | 0.003 | 0.49 | 1.0 | 0.04 | 5.85 | 0.00 | 2.236 | 3.91 | 0.82 | 10.8 | 89.2 | 0.0 | -4.46 | 0.88 | 0.77 | — | 4.9 | 0.002 | 0.63 | 0.0 | 0.04 | 9.04 | 0.00 | 2.114 | 10.16 | 0.00 | 3.3 | 96.6 | 0.0 | -0.85 | 0.87 | 0.89 | 0.82 | — | 29811 | 3783 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HZ9 | 0315 | 2023-04-24 | 2018-10-22 | 4.8 | 4.94 | 4.76 | 4.8 | 0.009 | 1.01 | 0.0 | 0.05 | 14.59 | 0.01 | 1.957 | 3.22 | 0.51 | 2.9 | 97.1 | 0.0 | -0.60 | 0.83 | 0.76 | — | 4.8 | 0.004 | 0.62 | 0.0 | 0.04 | 14.32 | 0.00 | 1.779 | 15.48 | 0.00 | 5.2 | 94.8 | 0.0 | -0.16 | 2.82 | 0.84 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 7SYJ | 25530 | 2023-04-29 | 2021-11-25 | 4.8 | 3.85 | 4.49 | 3.7 | 0.003 | 0.79 | 0.0 | 0.04 | 15.07 | 0.01 | 2.240 | 5.37 | 0.02 | 6.1 | 93.9 | 0.0 | -2.97 | 0.71 | 0.63 | — | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 16.13 | 0.00 | 1.961 | 18.87 | 0.02 | 8.2 | 91.8 | 0.0 | -1.69 | 1.32 | 0.74 | 0.69 | — | 78761 | 4891 | 38 | 1859 | 2 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2023-04-22 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.62 | 0.00 | 2.034 | 12.63 | 0.00 | 4.6 | 95.0 | 0.4 | -1.07 | 1.45 | 0.24 | 0.57 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TW2 | 26148 | 2023-04-22 | 2022-02-06 | 4.8 | 4.73 | — | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 13.68 | 0.01 | 2.177 | 9.73 | 0.07 | 2.2 | 97.8 | 0.0 | -1.27 | 0.66 | 0.72 | — | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.110 | 14.59 | 0.00 | 3.2 | 96.8 | 0.0 | 1.34 | 1.65 | 0.67 | 0.76 | — | 12838 | 1619 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5Z1F | 6875 | 2023-04-20 | 2017-12-26 | 4.8 | 4.85 | 4.58 | 4.8 | 0.006 | 0.87 | 0.0 | 0.05 | 13.13 | 0.01 | 2.213 | 25.36 | 5.04 | 9.8 | 89.2 | 1.0 | -4.90 | 0.60 | 0.76 | — | 4.8 | 0.003 | 0.77 | 0.0 | 0.04 | 11.46 | 0.01 | 2.252 | 13.30 | 0.00 | 6.1 | 93.9 | 0.0 | 0.30 | 1.40 | 0.59 | 0.76 | — | 8480 | 1202 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J03 | 5138 | 2023-04-21 | 2011-02-10 | 4.8 | 4.09 | — | 6.5 | 0.014 | 1.51 | 16.0 | 0.08 | 13.07 | 0.02 | 2.471 | 3.31 | 1.78 | 3.5 | 96.3 | 0.2 | -1.89 | 0.66 | 0.44 | — | 5.8 | 0.003 | 0.82 | 0.0 | 0.04 | 14.05 | 0.01 | 2.286 | 21.54 | 0.00 | 3.1 | 96.9 | 0.0 | -0.66 | 1.46 | 0.82 | 0.68 | — | 58640 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W4o | 21535 | 2023-04-28 | 2020-03-11 | 4.8 | 5.05 | 4.72 | 4.7 | 0.004 | 0.78 | 1.0 | 0.05 | 10.85 | 0.00 | 0.834 | 15.75 | 0.91 | 3.0 | 96.7 | 0.2 | -1.53 | 0.83 | 0.70 | — | 4.7 | 0.004 | 0.75 | 0.0 | 0.05 | 13.01 | 0.00 | 2.134 | 21.61 | 0.00 | 2.4 | 97.4 | 0.2 | 0.49 | 1.35 | 0.89 | 0.82 | — | 14475 | 1789 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QD2 | 4517 | 2023-04-26 | 2018-12-31 | 4.8 | 4.92 | 5.85 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.004 | 0.68 | 0.0 | 0.04 | 10.92 | 0.00 | 2.087 | 11.59 | 0.00 | 9.1 | 90.9 | 0.0 | -1.48 | 1.09 | 0.39 | 0.65 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✘ | 6TF9 | 10491 | 2023-04-23 | 2019-11-13 | 4.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 7oTQ | 13065 | 2023-04-28 | 2021-06-10 | 4.8 | 5.78 | 4.82 | 5.0 | 0.004 | 0.76 | 0.0 | 0.05 | 24.91 | 0.01 | 2.055 | 6.93 | 1.26 | 4.1 | 95.5 | 0.4 | -1.44 | 0.84 | 0.78 | — | 5.0 | 0.004 | 0.65 | 0.0 | 0.04 | 24.82 | 0.00 | 2.009 | 13.46 | 0.00 | 3.3 | 96.5 | 0.2 | 0.66 | 1.85 | 0.85 | 0.79 | — | 29140 | 1214 | 11 | 298 | 0 | 0 | 13365 | logfile |
✔ | 7oU2 | 13073 | 2023-04-21 | 2021-06-11 | 4.8 | 4.23 | — | 2.6 | 0.013 | 1.80 | 4.0 | 0.12 | 14.07 | 0.01 | 2.465 | 5.22 | 0.09 | 1.3 | 98.7 | 0.0 | 1.53 | 0.85 | 0.64 | — | 2.3 | 0.005 | 0.87 | 0.0 | 0.05 | 14.06 | 0.01 | 2.144 | 31.11 | 0.00 | 3.6 | 96.4 | 0.0 | -0.34 | 1.67 | 0.89 | 0.72 | — | 10798 | 1371 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2023-04-22 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.003 | 0.75 | 0.0 | 0.04 | 13.51 | 0.00 | 2.045 | 26.33 | 0.07 | 7.2 | 92.7 | 0.1 | -2.02 | 1.26 | 0.84 | 0.49 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2023-04-20 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 4.72 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.19 | 0.0 | 0.05 | 8.16 | 0.01 | 2.172 | 17.74 | 0.00 | 22.8 | 77.2 | 0.1 | -4.06 | 1.20 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 7TT7 | 26113 | 2023-04-22 | 2022-01-31 | 4.8 | 5.05 | — | 4.9 | 0.003 | 0.84 | 0.0 | 0.05 | 10.50 | 0.00 | 2.205 | 5.04 | 0.00 | 1.3 | 98.7 | 0.0 | 0.94 | 0.66 | 0.63 | — | 4.8 | 0.002 | 0.58 | 0.0 | 0.04 | 11.88 | 0.00 | 1.846 | 9.10 | 0.00 | 3.3 | 96.7 | 0.0 | -0.18 | 1.58 | 0.70 | 0.73 | — | 13296 | 867 | 5 | 0 | 0 | 0 | 6468 | logfile |