The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QP6 | 14113 | 2023-09-28 | 2022-01-03 | 4.7 | 4.90 | 4.71 | 4.6 | 0.011 | 1.50 | 51.0 | 0.10 | 16.89 | 0.02 | 2.016 | 10.57 | 5.29 | 4.4 | 95.3 | 0.3 | -1.97 | 0.76 | 0.71 | — | 4.6 | 0.004 | 0.77 | 0.0 | 0.04 | 15.83 | 0.01 | 1.936 | 21.90 | 0.02 | 6.5 | 93.4 | 0.0 | -0.76 | 0.99 | 0.80 | 0.82 | — | 109900 | 9873 | 57 | 1814 | 4 | 0 | 0 | logfile |
✔ | 6i52 | 4410 | 2023-09-27 | 2018-11-12 | 4.7 | 4.78 | — | 8.9 | 0.002 | 0.57 | 0.0 | 0.04 | 16.56 | 0.00 | 2.303 | 10.11 | 5.70 | 11.6 | 87.5 | 0.9 | -4.07 | 0.73 | 0.54 | — | 8.7 | 0.003 | 0.80 | 0.0 | 0.04 | 17.74 | 0.00 | 2.238 | 19.96 | 0.00 | 10.4 | 88.9 | 0.7 | -2.46 | 3.53 | 0.75 | 0.57 | — | 3856 | 432 | 4 | 20 | 0 | 0 | 0 | logfile |
✔ | 3J6E | 5895 | 2023-09-30 | 2014-02-18 | 4.7 | 4.79 | — | 4.7 | 0.021 | 2.60 | 18.0 | 0.13 | 13.25 | 0.01 | 1.539 | 5.62 | 0.28 | 3.4 | 96.2 | 0.4 | -0.68 | 0.62 | 0.66 | — | 4.7 | 0.003 | 0.72 | 0.0 | 0.04 | 14.09 | 0.00 | 1.877 | 18.82 | 0.02 | 2.6 | 97.4 | 0.0 | 0.35 | 2.15 | 0.69 | 0.79 | — | 60984 | 7686 | 54 | 0 | 36 | 72 | 0 | logfile |
✔ | 6CEB | 7463 | 2023-09-30 | 2018-02-11 | 4.7 | 5.92 | — | 4.7 | 0.006 | 1.02 | 0.0 | 0.06 | 9.64 | 0.01 | 1.288 | 8.80 | 0.00 | 11.8 | 88.0 | 0.2 | -3.39 | 0.88 | 0.82 | — | 4.7 | 0.005 | 0.81 | 0.0 | 0.05 | 11.21 | 0.00 | 2.127 | 25.98 | 0.00 | 12.8 | 87.2 | 0.0 | -2.59 | 2.07 | 0.89 | 0.85 | — | 11722 | 1406 | 20 | 0 | 30 | 0 | 0 | logfile |
✔ | 7ZKB | 14761 | 2023-09-29 | 2022-04-12 | 4.7 | 4.80 | 4.47 | 4.7 | 0.013 | 1.10 | 2.0 | 0.06 | 14.01 | 0.00 | 2.224 | 16.22 | 0.21 | 6.9 | 93.1 | 0.0 | 0.07 | 0.56 | 0.74 | — | 4.7 | 0.003 | 0.71 | 0.0 | 0.04 | 14.48 | 0.00 | 2.134 | 14.95 | 0.00 | 6.4 | 93.6 | 0.0 | -0.02 | 0.55 | 0.56 | 0.76 | — | 9043 | 1158 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QE5 | 13930 | 2023-09-30 | 2021-12-01 | 4.7 | 4.93 | 4.36 | 4.7 | 0.013 | 2.06 | 17.0 | 0.11 | 14.37 | 0.02 | 2.209 | 6.87 | 1.14 | 4.8 | 95.0 | 0.3 | -2.59 | 0.65 | 0.66 | — | 4.8 | 0.003 | 0.67 | 0.0 | 0.04 | 13.57 | 0.01 | 1.998 | 12.96 | 0.00 | 4.6 | 95.2 | 0.1 | 0.18 | 1.12 | 0.65 | 0.68 | — | 11652 | 740 | 2 | 0 | 0 | 0 | 5932 | logfile |
✔ | 8HC6 | 34653 | 2023-09-28 | 2022-11-01 | 4.69 | 5.06 | 4.63 | 4.8 | 0.003 | 0.57 | 0.0 | 0.05 | 13.45 | 0.00 | 2.296 | 4.88 | 0.12 | 4.6 | 95.4 | 0.0 | -0.78 | 0.80 | 0.70 | — | 4.8 | 0.003 | 0.62 | 0.0 | 0.04 | 13.41 | 0.00 | 2.175 | 16.76 | 0.00 | 6.9 | 93.1 | 0.0 | -1.56 | 0.77 | 0.82 | 0.75 | — | 7377 | 933 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2023-09-27 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.74 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.18 | 0.00 | 2.190 | 46.28 | 0.41 | 4.8 | 95.2 | 0.0 | 1.10 | 0.62 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 6KS8 | 0760 | 2023-09-30 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.86 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.73 | 0.0 | 0.05 | 11.70 | 0.00 | 2.011 | 17.70 | 0.01 | 3.4 | 96.6 | 0.0 | -0.29 | 1.89 | 0.81 | 0.73 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6AYG | 7020 | 2023-09-30 | 2017-09-08 | 4.65 | 4.76 | — | 4.6 | 0.013 | 1.56 | 0.0 | 0.07 | 11.75 | 0.01 | 2.180 | 19.94 | 1.09 | 7.7 | 91.9 | 0.5 | -4.34 | 0.84 | 0.80 | — | 4.6 | 0.002 | 0.59 | 0.0 | 0.04 | 10.50 | 0.00 | 2.121 | 3.95 | 0.00 | 2.8 | 97.2 | 0.0 | 2.30 | 0.90 | 0.83 | 0.78 | — | 10456 | 1756 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FEJ | 29029 | 2023-09-30 | 2022-12-06 | 4.64 | 5.33 | 4.68 | 4.6 | 0.001 | 0.37 | 0.0 | 0.04 | 13.97 | 0.00 | 2.253 | 6.27 | 4.30 | 2.9 | 96.9 | 0.2 | 0.48 | 0.88 | 0.69 | — | 4.5 | 0.002 | 0.56 | 0.0 | 0.04 | 12.24 | 0.00 | 2.204 | 9.64 | 0.00 | 6.1 | 93.7 | 0.2 | -0.44 | 1.31 | 0.91 | 0.74 | — | 10464 | 1368 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FEL | 29032 | 2023-09-29 | 2022-12-06 | 4.64 | 5.02 | 4.40 | 4.5 | 0.001 | 0.35 | 0.0 | 0.04 | 14.88 | 0.00 | 2.191 | 6.97 | 1.98 | 3.8 | 96.2 | 0.0 | -0.24 | 0.70 | 0.37 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 12.77 | 0.00 | 2.288 | 10.75 | 0.00 | 3.8 | 96.2 | 0.0 | 0.13 | 1.69 | 0.74 | 0.45 | — | 9201 | 1191 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS7 | 0759 | 2023-09-30 | 2019-08-23 | 4.62 | 4.57 | — | 4.5 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.241 | 5.72 | 0.00 | 4.3 | 95.7 | 0.0 | -3.50 | 0.70 | 0.62 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 12.04 | 0.00 | 2.131 | 14.80 | 0.03 | 3.3 | 96.6 | 0.1 | -0.06 | 1.85 | 0.74 | 0.67 | — | 62022 | 8131 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6BNP | 7116 | 2023-09-29 | 2017-11-17 | 4.6 | 4.61 | 3.78 | 4.4 | 0.015 | 2.10 | 24.0 | 0.11 | 16.18 | 0.02 | 1.814 | 0.55 | 1.80 | 8.3 | 90.3 | 1.3 | -3.94 | 0.48 | 0.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56792 | 7160 | 22 | 0 | 16 | 0 | 0 | logfile |
✔ | 8B40 | 15835 | 2023-09-30 | 2022-09-19 | 4.6 | 4.13 | 4.51 | 3.6 | 0.002 | 0.50 | 0.0 | 0.04 | 10.45 | 0.00 | 2.149 | 11.85 | 4.31 | 4.2 | 95.7 | 0.0 | -0.38 | 0.77 | 0.69 | — | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 10.91 | 0.00 | 2.129 | 15.12 | 0.00 | 5.6 | 94.4 | 0.0 | -0.80 | 1.02 | 0.76 | 0.66 | — | 39466 | 4844 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SH5 | 10194 | 2023-09-30 | 2019-08-05 | 4.6 | 4.70 | — | 4.5 | 0.005 | 0.97 | 0.0 | 0.05 | 5.65 | 0.01 | 2.474 | 2.35 | 0.00 | 9.0 | 91.0 | 0.0 | -3.63 | 0.80 | 0.76 | — | 4.5 | 0.004 | 0.82 | 0.0 | 0.04 | 5.28 | 0.00 | 2.265 | 5.49 | 0.00 | 16.4 | 83.6 | 0.0 | -2.90 | 1.64 | 0.82 | 0.82 | — | 11529 | 2338 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PiM | 13442 | 2023-09-30 | 2021-08-20 | 4.6 | 5.02 | 5.18 | 4.6 | 0.002 | 0.41 | 0.0 | 0.03 | 8.31 | 0.00 | 1.900 | 45.64 | 0.67 | 2.0 | 98.0 | 0.0 | 2.23 | 0.81 | 0.76 | — | 4.6 | 0.002 | 0.46 | 0.0 | 0.03 | 12.01 | 0.00 | 1.854 | 66.59 | 0.00 | 3.2 | 96.8 | 0.0 | 0.47 | 1.02 | 0.82 | 0.76 | — | 11844 | 1412 | 12 | 0 | 8 | 0 | 524 | logfile |
✔ | 7JLX | 22383 | 2023-09-27 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7DGR | 30674 | 2023-09-27 | 2020-11-12 | 4.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 107305 | 13811 | 102 | 0 | 37 | 0 | 0 | logfile |
✔ | 7K1V | 22630 | 2023-09-28 | 2020-09-08 | 4.6 | 4.95 | — | 4.8 | 0.008 | 1.12 | 0.0 | 0.06 | 15.77 | 0.01 | 2.159 | 13.77 | 0.40 | 11.0 | 89.0 | 0.0 | -4.04 | 0.71 | 0.71 | — | 4.8 | 0.003 | 0.72 | 0.0 | 0.04 | 13.84 | 0.00 | 2.160 | 21.48 | 0.00 | 7.3 | 92.7 | 0.0 | -1.21 | 2.35 | 0.70 | 0.75 | — | 4971 | 626 | 1 | 0 | 0 | 0 | 0 | logfile |