Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	2XEA	1730	2022-05-13	2010-05-12	4.6	4.10	—	4.2	0.012	2.12	0.0	0.12	20.46	0.02	1.226	162.14	3.68	8.6	90.1	1.3	-3.51	0.39	0.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	62671	7546	98	147	0	0	0	logfile
✘	6Jo5	9853	2022-05-18	2019-03-20	2.9	2.97	—	2.9	0.028	2.73	0.0	0.09	18.14	0.02	1.209	12.17	0.43	4.0	96.0	0.1	-2.29	0.79	0.84	3.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	48476	4170	40	0	313	0	0	logfile
✘	6N06	9311	2022-05-15	2018-11-06	3.4	3.49	—	3.5	0.005	0.74	0.0	0.05	8.24	0.01	2.241	7.24	0.04	1.9	98.1	0.0	-4.01	0.76	0.86	3.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28197	3915	39	0	0	0	0	logfile
✘	6MZV	9308	2022-05-16	2018-11-05	3.4	3.57	—	3.5	0.006	0.73	0.0	0.05	8.48	0.01	2.343	7.32	0.34	3.4	96.6	0.0	-4.51	0.79	0.86	4.27	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	32833	4523	42	0	0	0	0	logfile
✘	5GW5	9541	2022-05-13	2016-09-08	4.6	4.75	—	4.7	0.002	0.58	0.0	0.04	7.37	0.00	2.136	6.96	0.01	4.5	95.4	0.1	-3.73	0.74	0.64	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	64544	8446	16	0	0	0	0	logfile
✘	6Mi8	9126	2022-05-12	2018-09-19	4.3	4.20	—	4.2	0.007	1.17	0.0	0.07	11.58	0.01	1.262	6.40	0.13	8.8	91.2	0.0	-5.13	0.56	0.74	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7139	911	6	0	2	0	0	logfile
✘	6G2H	4343	2022-05-17	2018-03-23	4.6	4.69	—	4.5	0.013	1.94	46.0	0.11	13.54	0.01	1.921	14.14	2.29	8.3	91.0	0.7	-3.04	0.79	0.65	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	103896	6454	6	0	0	0	51852	logfile
✘	6EF0	9042	2022-05-15	2018-08-15	4.43	3.84	—	4.1	0.011	1.07	0.0	0.06	12.59	0.01	2.089	8.62	0.00	16.8	83.2	0.0	-5.24	0.62	0.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24748	3318	20	0	6	0	0	logfile
✘	6C0W	7326	2022-05-13	2018-01-02	4.0	4.10	3.87	4.0	0.006	0.81	0.0	0.05	27.80	0.01	2.107	4.30	0.00	4.9	95.1	0.0	-4.19	0.80	0.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13122	925	11	278	0	0	0	logfile
✘	6RBE	4795	2022-05-15	2019-04-10	3.8	3.81	4.03	5.1	0.007	1.27	0.0	0.06	18.44	0.01	2.076	9.23	1.35	11.9	86.8	1.2	-4.17	0.38	0.09	0.25	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72721	4512	33	1750	0	0	0	logfile
✘	6DUZ	8913	2022-05-15	2018-06-22	3.6	3.88	—	3.8	0.006	0.97	0.0	0.05	11.01	0.01	1.677	4.87	4.35	3.2	96.8	0.0	-4.32	0.76	0.82	2.31	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72744	9072	48	0	0	0	0	logfile
✘	6RBE	4794	2022-05-15	2019-04-10	3.8	4.03	3.73	40.0	0.007	1.27	0.0	0.06	18.44	0.01	2.076	9.23	1.35	11.9	86.8	1.2	-4.17	0.25	0.02	0.00	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	72721	4512	33	1750	0	0	0	logfile
✘	5GW4	9540	2022-05-13	2016-09-08	4.7	4.89	—	4.8	0.001	0.42	0.0	0.04	7.26	0.00	2.187	6.57	0.00	4.3	95.6	0.1	-3.58	0.77	0.66	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	64544	8446	16	0	0	0	0	logfile
✘	6RX4	10049	2022-05-12	2019-06-07	3.3	3.78	3.21	3.8	0.007	1.12	0.0	0.06	11.76	0.01	1.205	5.46	0.14	4.5	95.5	0.0	-4.07	0.67	0.80	2.95	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7347	884	8	0	31	7	0	logfile
✘	6oMB	20124	2022-05-14	2019-04-18	3.7	3.91	—	3.8	0.010	0.96	0.0	0.05	15.28	0.03	1.515	4.75	0.18	7.3	92.7	0.0	-4.26	0.75	0.81	0.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21815	2775	11	0	48	0	0	logfile
✘	6QEL	4537	2022-05-13	2019-01-08	3.9	4.04	—	4.0	0.011	1.02	0.0	0.05	11.57	0.01	1.292	4.73	0.46	11.6	88.4	0.0	-4.53	0.79	0.76	1.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	64816	4092	24	0	24	0	32302	logfile
✘	6Ui9	20783	2022-05-16	2019-09-30	3.1	3.28	—	3.3	0.012	1.23	0.0	0.07	15.82	0.01	1.023	6.72	0.27	6.7	93.1	0.2	-3.91	0.67	0.67	2.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	31951	4084	8	0	12	0	0	logfile
✘	6RUo	10007	2022-05-18	2019-05-28	3.5	3.56	—	4.0	0.007	1.05	0.0	0.06	13.11	0.01	2.170	8.01	0.40	10.5	89.4	0.1	-4.99	0.53	0.29	0.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	50792	6086	26	93	8	0	0	logfile
✘	6FBS	4225	2022-05-13	2017-12-19	3.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	-4.09	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13421	1665	5	8	3	0	0	logfile
✘	5XJY	6724	2022-05-13	2017-05-04	4.1	4.17	—	4.1	0.010	1.29	0.0	0.07	12.18	0.01	2.200	9.29	1.27	14.1	85.8	0.2	-6.01	0.64	0.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12785	1901	1	0	12	0	0	logfile

• ← previous
• Page 3 of 376
• next →