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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PTL | 13630 | 2022-12-14 | 2021-09-27 | 4.9 | 10.06 | 4.96 | — | 0.005 | 1.01 | 0.0 | 0.06 | 16.11 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.89 | 0.0 | 0.04 | 21.16 | 0.01 | 1.741 | 84.45 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.51 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 7P64 | 13217 | 2022-12-20 | 2021-07-15 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38981 | 4732 | 37 | 0 | 36 | 987 | 0 | logfile |
✔ | 7UVT | 26816 | 2022-12-12 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.71 | 0.0 | 0.04 | 18.04 | 0.01 | 1.910 | 21.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7PTQ | 13633 | 2022-12-13 | 2021-09-27 | 4.08 | 6.47 | 4.22 | 4.0 | 0.005 | 0.78 | 0.0 | 0.04 | 15.27 | 0.00 | 1.983 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.80 | — | 4.0 | 0.006 | 0.67 | 0.0 | 0.04 | 19.31 | 0.00 | 1.850 | 42.16 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.74 | 0.96 | 0.94 | — | 17434 | 0 | 1 | 544 | 0 | 0 | 5847 | logfile |
✔ | 7URM | 26714 | 2022-12-11 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.17 | 0.0 | 0.05 | 22.99 | 0.01 | 1.988 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.55 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 8ECY | 28025 | 2022-12-21 | 2022-09-02 | 2.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46485 | 5540 | 45 | 0 | 36 | 2024 | 0 | logfile |
✔ | 7UR5 | 26705 | 2022-12-11 | 2022-04-21 | 2.6 | 2.89 | 2.82 | 2.9 | 0.008 | 1.48 | 0.0 | 0.11 | 25.09 | 0.01 | 2.204 | 2.44 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.58 | — | 2.9 | 0.006 | 0.91 | 0.0 | 0.05 | 20.81 | 0.01 | 2.000 | 17.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.86 | 0.08 | 0.66 | — | 5709 | 0 | 3 | 270 | 0 | 0 | 0 | logfile |
✔ | 8CYE | 27076 | 2022-12-21 | 2022-05-23 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44198 | 5918 | 22 | 0 | 0 | 0 | 0 | logfile |
✘ | 8D9M | 27266 | 2022-12-18 | 2022-06-10 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18248 | 2064 | 8 | 0 | 64 | 0 | 0 | logfile |
✔ | 7XSL | 33426 | 2022-12-12 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 16.20 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.007 | 0.70 | 0.0 | 0.04 | 18.30 | 0.01 | 1.809 | 34.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.02 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7V0K | 26943 | 2022-12-18 | 2022-05-10 | 2.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32037 | 3997 | 22 | 0 | 14 | 554 | 0 | logfile |
✔ | 7XSN | 33428 | 2022-12-11 | 2022-05-14 | 3.01 | 4.02 | 3.04 | 3.2 | 0.013 | 1.06 | 0.0 | 0.05 | 16.67 | 0.01 | 2.252 | 5.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.84 | — | 3.2 | 0.006 | 0.62 | 0.0 | 0.03 | 16.36 | 0.00 | 2.110 | 21.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.27 | 0.92 | 0.87 | — | 8279 | 0 | 1 | 387 | 0 | 0 | 0 | logfile |
✔ | 7PSD | 13612 | 2022-12-18 | 2021-09-22 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9032 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XSK | 33425 | 2022-12-12 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 15.94 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.006 | 0.66 | 0.0 | 0.04 | 18.19 | 0.01 | 1.742 | 27.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.08 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7URi | 26713 | 2022-12-11 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.007 | 1.42 | 0.0 | 0.07 | 23.80 | 0.01 | 2.074 | 24.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.69 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7XSM | 33427 | 2022-12-12 | 2022-05-14 | 4.01 | 4.70 | 4.03 | 4.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.76 | 0.00 | 1.969 | 7.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.75 | — | 4.0 | 0.007 | 0.77 | 0.0 | 0.04 | 19.97 | 0.01 | 1.775 | 49.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.71 | 0.92 | 0.82 | — | 12464 | 0 | 1 | 388 | 0 | 0 | 4165 | logfile |
✘ | 7VDD | 31914 | 2022-12-18 | 2021-09-06 | 3.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11940 | 1044 | 10 | 0 | 0 | 0 | 3736 | logfile |
✘ | 7VC4 | 31888 | 2022-12-18 | 2021-09-01 | 3.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16311 | 1046 | 10 | 0 | 0 | 0 | 8079 | logfile |
✘ | 7Z37 | 14472 | 2022-12-18 | 2022-03-01 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✔ | 7ZFW | 14704 | 2022-12-13 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.007 | 0.80 | 0.0 | 0.05 | 17.76 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.009 | 0.88 | 0.0 | 0.04 | 20.35 | 0.01 | 1.947 | 37.81 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.54 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |