The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JSH | 22454 | 2022-04-04 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.004 | 1.19 | 0.0 | 0.04 | 13.17 | 0.00 | 1.948 | 19.40 | 0.00 | 27.4 | 72.5 | 0.2 | -5.14 | 6.11 | 0.74 | 0.62 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2022-04-05 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 23.66 | 0.01 | 1.957 | 72.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.26 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2022-04-06 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.31 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.004 | 0.76 | 0.0 | 0.04 | 17.15 | 0.01 | 1.994 | 28.48 | 0.45 | 18.5 | 80.5 | 1.1 | -4.42 | 1.71 | 0.79 | 0.64 | 0.68 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-04-06 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.81 | 0.00 | 1.858 | 2.53 | 0.27 | 0.6 | 99.4 | 0.0 | 5.26 | 0.58 | 0.88 | 0.94 | 8.02 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7o5H | 12736 | 2022-04-08 | 2021-04-08 | 3.1 | 2.93 | 3.04 | 2.8 | 0.002 | 0.33 | 0.0 | 0.03 | 12.30 | 0.00 | 1.262 | 5.88 | 0.98 | 2.1 | 97.9 | 0.0 | 1.09 | 0.86 | 0.83 | 1.84 | 2.8 | 0.006 | 0.67 | 0.0 | 0.04 | 14.61 | 0.01 | 1.074 | 13.55 | 0.42 | 3.8 | 96.2 | 0.0 | 0.27 | 1.48 | 0.87 | 0.85 | 1.30 | 34436 | 1730 | 22 | 964 | 167 | 0 | 0 | logfile |
✔ | 7R9U | 24331 | 2022-04-04 | 2021-06-29 | 4.4 | 5.41 | — | 4.3 | 0.002 | 0.34 | 0.0 | 0.04 | 4.36 | 0.00 | 2.248 | 3.50 | 0.00 | 9.1 | 90.3 | 0.6 | -4.49 | 0.78 | 0.62 | — | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 8.66 | 0.00 | 1.913 | 10.10 | 0.00 | 3.8 | 96.2 | 0.0 | 0.26 | 2.39 | 0.91 | 0.84 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 7R9K | 24328 | 2022-04-04 | 2021-06-29 | 4.1 | 4.93 | — | 4.0 | 0.002 | 0.35 | 0.0 | 0.04 | 4.65 | 0.00 | 2.223 | 3.24 | 0.00 | 10.3 | 89.1 | 0.6 | -4.05 | 0.83 | 0.71 | — | 4.1 | 0.002 | 0.52 | 0.0 | 0.04 | 8.10 | 0.00 | 1.907 | 9.19 | 0.00 | 5.0 | 95.0 | 0.0 | 0.38 | 1.77 | 0.89 | 0.83 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 5N6W | 3595 | 2022-04-09 | 2017-02-16 | 4.2 | 4.31 | — | 4.2 | 0.001 | 0.36 | 0.0 | 0.04 | 4.92 | 0.00 | 2.309 | 3.73 | 0.00 | 17.7 | 79.7 | 2.6 | -5.61 | 0.44 | 0.27 | — | 4.2 | 0.021 | 1.61 | 1.0 | 0.04 | 10.59 | 0.01 | 1.586 | 23.47 | 0.04 | 11.8 | 87.5 | 0.6 | -4.11 | 1.47 | 0.68 | 0.64 | — | 40752 | 2512 | 16 | 0 | 0 | 0 | 20032 | logfile |
✔ | 6X32 | 22015 | 2022-04-05 | 2020-05-21 | 3.8 | 3.75 | — | 3.9 | 0.001 | 0.36 | 0.0 | 0.03 | 7.99 | 0.00 | 2.266 | 3.27 | 0.00 | 1.4 | 98.6 | 0.0 | -3.72 | 0.56 | 0.69 | 2.26 | 3.8 | 0.008 | 0.84 | 3.0 | 0.04 | 13.31 | 0.01 | 1.508 | 10.98 | 0.16 | 2.8 | 97.2 | 0.0 | 0.31 | 1.67 | 0.60 | 0.73 | 1.88 | 114280 | 14744 | 16 | 0 | 1416 | 0 | 0 | logfile |
✔ | 6MWQ | 9277 | 2022-04-06 | 2018-10-30 | 3.0 | 3.33 | 2.89 | 3.1 | 0.001 | 0.36 | 0.0 | 0.04 | 4.66 | 0.00 | 2.321 | 4.19 | 0.13 | 11.0 | 87.5 | 1.5 | -4.81 | 0.54 | 0.39 | 0.22 | 3.1 | 0.004 | 0.75 | 0.0 | 0.04 | 13.37 | 0.00 | 2.114 | 9.31 | 2.04 | 4.9 | 94.9 | 0.2 | -1.32 | 1.34 | 0.78 | 0.86 | 1.93 | 22072 | 2873 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Fii | 31598 | 2022-04-05 | 2021-07-31 | 4.3 | 4.37 | — | 4.1 | 0.002 | 0.36 | 0.0 | 0.04 | 8.97 | 0.00 | 2.073 | 1.52 | 0.00 | 0.9 | 99.1 | 0.0 | 3.08 | 0.64 | 0.69 | — | 4.1 | 0.003 | 0.57 | 0.0 | 0.04 | 9.50 | 0.00 | 2.272 | 5.60 | 0.00 | 3.6 | 96.4 | 0.0 | 1.07 | 0.67 | 0.66 | 0.75 | — | 8765 | 1522 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XLG | 22243 | 2022-04-05 | 2020-06-28 | 2.71 | 2.81 | — | 2.8 | 0.001 | 0.36 | 0.0 | 0.04 | 10.12 | 0.00 | 2.105 | 5.84 | 0.00 | 1.3 | 98.7 | 0.0 | -3.01 | 0.73 | 0.81 | 4.05 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.65 | 0.00 | 2.000 | 8.70 | 1.78 | 2.2 | 97.8 | 0.0 | -0.16 | 3.07 | 0.77 | 0.88 | 4.10 | 12258 | 1504 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6X35 | 22018 | 2022-04-05 | 2020-05-21 | 4.2 | 4.14 | — | 4.2 | 0.001 | 0.37 | 0.0 | 0.03 | 8.42 | 0.00 | 2.202 | 3.37 | 0.05 | 1.8 | 98.1 | 0.0 | -1.11 | 0.52 | 0.67 | — | 4.1 | 0.007 | 0.77 | 1.0 | 0.04 | 11.45 | 0.01 | 2.167 | 10.22 | 0.00 | 3.8 | 96.2 | 0.0 | 0.78 | 1.69 | 0.58 | 0.73 | — | 111888 | 14740 | 16 | 0 | 1432 | 0 | 0 | logfile |
✔ | 6X33 | 22016 | 2022-04-05 | 2020-05-21 | 4.2 | 4.35 | — | 4.3 | 0.001 | 0.37 | 0.0 | 0.03 | 9.39 | 0.00 | 2.304 | 3.20 | 0.00 | 1.9 | 98.1 | 0.0 | -4.22 | 0.55 | 0.69 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 11.88 | 0.00 | 2.069 | 10.18 | 0.05 | 3.9 | 96.1 | 0.0 | 0.00 | 0.68 | 0.58 | 0.72 | — | 112372 | 14796 | 16 | 0 | 1436 | 0 | 0 | logfile |
✔ | 7TJ2 | 25915 | 2022-04-06 | 2022-01-14 | 3.2 | 3.32 | — | 3.4 | 0.002 | 0.37 | 0.0 | 0.04 | 8.62 | 0.00 | 2.196 | 3.77 | 1.64 | 2.4 | 97.6 | 0.0 | 0.18 | 0.69 | 0.76 | 3.52 | 3.3 | 0.005 | 0.59 | 0.0 | 0.04 | 13.55 | 0.00 | 2.183 | 6.46 | 0.28 | 3.4 | 96.6 | 0.0 | -0.19 | 2.83 | 0.71 | 0.82 | 3.48 | 17083 | 2007 | 8 | 62 | 0 | 0 | 0 | logfile |
✔ | 7R9E | 24324 | 2022-04-04 | 2021-06-29 | 4.0 | 4.83 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.04 | 4.45 | 0.00 | 2.277 | 3.11 | 0.00 | 9.9 | 88.7 | 1.4 | -3.58 | 0.87 | 0.80 | — | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 9.06 | 0.00 | 2.156 | 9.58 | 0.00 | 5.2 | 94.8 | 0.0 | 0.03 | 2.07 | 0.88 | 0.82 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 6NEQ | 9358 | 2022-04-05 | 2018-12-18 | 3.32 | 3.85 | — | 3.5 | 0.001 | 0.37 | 0.0 | 0.03 | 12.81 | 0.00 | 1.949 | 3.27 | 0.35 | 10.3 | 88.1 | 1.6 | -2.42 | 0.69 | 0.51 | 0.07 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 16.24 | 0.01 | 2.099 | 13.00 | 0.35 | 5.3 | 94.6 | 0.1 | -0.32 | 1.93 | 0.84 | 0.84 | 1.44 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |
✔ | 6YW5 | 10958 | 2022-04-11 | 2020-04-29 | 2.85 | 2.95 | 2.83 | 2.9 | 0.002 | 0.37 | 0.0 | 0.03 | 10.00 | 0.00 | 1.841 | 2.52 | 0.14 | 1.6 | 98.4 | 0.0 | -2.99 | 0.73 | 0.86 | 5.10 | 2.9 | 0.002 | 0.51 | 0.0 | 0.03 | 13.94 | 0.00 | 1.860 | 4.33 | 0.66 | 2.4 | 97.6 | 0.0 | 1.20 | 0.63 | 0.73 | 0.88 | 4.10 | 167548 | 7528 | 47 | 1435 | 120 | 0 | 76656 | logfile |
✔ | 7VX9 | 32172 | 2022-04-09 | 2021-11-12 | 4.0 | 4.30 | — | 4.2 | 0.002 | 0.37 | 0.0 | 0.04 | 7.20 | 0.00 | 2.022 | 12.45 | 0.00 | 4.1 | 95.8 | 0.1 | -2.09 | 0.63 | 0.59 | — | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 14.40 | 0.00 | 1.913 | 37.84 | 0.48 | 3.9 | 96.0 | 0.2 | -0.67 | 1.39 | 0.67 | 0.72 | — | 46098 | 3789 | 4 | 0 | 0 | 0 | 16250 | logfile |
✔ | 5ZBo | 6746 | 2022-04-08 | 2018-02-12 | 4.12 | 4.69 | — | 4.8 | 0.001 | 0.38 | 0.0 | 0.04 | 15.92 | 0.00 | 2.148 | 1.93 | 0.49 | 11.1 | 86.2 | 2.7 | -4.88 | 0.71 | 0.60 | — | 4.1 | 0.003 | 0.77 | 1.0 | 0.04 | 13.18 | 0.00 | 2.045 | 19.38 | 0.00 | 5.9 | 94.1 | 0.0 | -2.25 | 2.94 | 0.74 | 0.79 | — | 89100 | 10860 | 60 | 0 | 0 | 0 | 0 | logfile |