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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WoG | 32651 | 2023-04-20 | 2022-01-21 | 4.06 | 2.95 | — | 2.0 | 0.001 | 0.41 | 0.0 | 0.04 | 8.09 | 0.00 | 2.293 | 10.22 | 3.78 | 8.0 | 92.0 | 0.0 | -3.98 | 0.51 | 0.51 | — | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 10.94 | 0.00 | 2.020 | 21.35 | 0.00 | 13.1 | 86.9 | 0.0 | -2.59 | 1.02 | 0.54 | 0.55 | — | 3362 | 433 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXB | 32174 | 2023-04-29 | 2021-11-12 | 3.9 | 4.21 | — | 4.1 | 0.002 | 0.41 | 0.0 | 0.04 | 7.20 | 0.00 | 2.045 | 12.33 | 0.00 | 4.1 | 95.8 | 0.0 | -1.93 | 0.60 | 0.62 | 0.94 | 4.1 | 0.007 | 0.88 | 0.0 | 0.05 | 14.42 | 0.01 | 1.887 | 22.12 | 0.75 | 4.9 | 95.0 | 0.1 | -0.50 | 1.20 | 0.67 | 0.76 | 0.98 | 29888 | 3795 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oJN | 12956 | 2023-04-24 | 2021-05-16 | 2.92 | 3.27 | 2.89 | 2.9 | 0.004 | 0.41 | 0.0 | 0.04 | 9.23 | 0.00 | 1.859 | 3.51 | 0.93 | 4.7 | 95.2 | 0.1 | 0.93 | 0.88 | 0.83 | 3.05 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 12.90 | 0.00 | 2.095 | 5.50 | 1.53 | 5.0 | 95.0 | 0.0 | 0.73 | 2.62 | 0.91 | 0.90 | 3.01 | 16991 | 2010 | 6 | 39 | 7 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-04-22 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 7oDR | 12845 | 2023-04-19 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 11.20 | 0.02 | 1.963 | 4.98 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 15.27 | 0.01 | 1.900 | 10.20 | 2.30 | 2.0 | 98.0 | 0.0 | 0.89 | 1.26 | 0.76 | 0.84 | 2.70 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |
✔ | 6WCB | 21605 | 2023-04-22 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 15.55 | 0.00 | 2.072 | 3.71 | 0.16 | 1.7 | 98.3 | 0.0 | 3.40 | 1.29 | 0.54 | 0.79 | 2.46 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 7oDT | 12847 | 2023-04-21 | 2021-04-30 | 3.1 | 3.31 | — | 3.1 | 0.003 | 0.41 | 0.0 | 0.03 | 11.01 | 0.01 | 1.988 | 5.28 | 0.53 | 1.2 | 98.8 | 0.0 | 1.05 | 0.77 | 0.79 | 2.84 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.67 | 0.00 | 1.891 | 10.64 | 0.27 | 2.6 | 97.4 | 0.0 | 0.69 | 0.71 | 0.78 | 0.83 | 2.53 | 110473 | 9585 | 71 | 1526 | 110 | 0 | 0 | logfile |
✔ | 6W18 | 21503 | 2023-04-22 | 2020-03-03 | 4.2 | 4.20 | 4.18 | 4.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.01 | 0.00 | 2.196 | 4.75 | 0.00 | 3.0 | 97.0 | 0.0 | -3.43 | 0.71 | 0.62 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 12.93 | 0.00 | 2.101 | 9.37 | 0.18 | 7.3 | 92.7 | 0.0 | -1.63 | 1.34 | 0.77 | 0.71 | — | 13151 | 1837 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PE8 | 13348 | 2023-04-29 | 2021-08-09 | 3.2 | 3.51 | — | 3.4 | 0.002 | 0.41 | 0.0 | 0.04 | 8.71 | 0.00 | 2.255 | 4.47 | 1.65 | 3.2 | 96.8 | 0.0 | -0.20 | 0.79 | 0.81 | 2.75 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 12.64 | 0.00 | 2.179 | 7.13 | 0.40 | 4.0 | 96.0 | 0.0 | 0.66 | 0.49 | 0.80 | 0.83 | 1.94 | 29291 | 3832 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7T4N | 25681 | 2023-04-20 | 2021-12-10 | 2.35 | 2.66 | 2.38 | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 16.22 | 0.00 | 2.207 | 4.39 | 1.25 | 1.0 | 99.0 | 0.0 | 0.87 | 0.63 | 0.85 | 3.82 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 16.48 | 0.00 | 2.284 | 5.93 | 1.53 | 1.0 | 99.0 | 0.0 | 1.61 | 0.24 | 0.66 | 0.87 | 3.71 | 6476 | 803 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T8C | 25744 | 2023-04-28 | 2021-12-16 | 4.5 | 3.21 | 4.51 | 4.6 | 0.001 | 0.42 | 0.0 | 0.04 | 7.59 | 0.00 | 2.347 | 5.08 | 0.41 | 3.6 | 96.4 | 0.0 | 0.76 | 0.63 | 0.54 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.04 | 10.96 | 0.00 | 2.130 | 11.08 | 0.00 | 4.6 | 95.4 | 0.0 | 0.62 | 1.08 | 0.66 | 0.61 | — | 28952 | 3626 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2023-04-22 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U1E | 26299 | 2023-04-24 | 2022-02-21 | 4.52 | 4.53 | — | 4.5 | 0.001 | 0.42 | 0.0 | 0.04 | 11.18 | 0.00 | 2.240 | 5.36 | 2.68 | 3.6 | 96.4 | 0.0 | -1.42 | 0.60 | 0.73 | — | 4.4 | 0.005 | 0.72 | 0.0 | 0.05 | 11.96 | 0.00 | 2.129 | 15.55 | 0.00 | 6.0 | 94.0 | 0.0 | 0.02 | 0.62 | 0.61 | 0.76 | — | 18366 | 2741 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-04-20 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EU8 | 31309 | 2023-04-24 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.42 | 0.0 | 0.10 | 7.80 | 0.00 | 2.206 | 3.16 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.002 | 0.62 | 0.0 | 0.06 | 8.46 | 0.00 | 2.129 | 7.57 | 0.00 | 3.8 | 96.0 | 0.2 | 0.14 | 1.37 | 0.79 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7WU9 | 32824 | 2023-04-20 | 2022-02-07 | 3.375 | 3.51 | 3.21 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 13.28 | 0.00 | 2.137 | 6.33 | 0.00 | 3.0 | 97.0 | 0.0 | 1.21 | 0.71 | 0.82 | 3.04 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.22 | 0.00 | 2.261 | 8.40 | 0.43 | 3.0 | 97.0 | 0.0 | 1.17 | 0.82 | 0.68 | 0.83 | 2.14 | 7369 | 1030 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DK1 | 27480 | 2023-04-25 | 2022-07-01 | 2.95 | 3.68 | 3.03 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 9.97 | 0.00 | 2.294 | 2.83 | 1.44 | 3.3 | 96.7 | 0.0 | 2.11 | 0.85 | 0.90 | 2.51 | 3.4 | 0.002 | 0.51 | 0.0 | 0.04 | 12.85 | 0.00 | 2.260 | 3.98 | 1.49 | 3.6 | 96.4 | 0.0 | 2.59 | 0.62 | 0.85 | 0.90 | 2.22 | 19500 | 2446 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oZN | 13129 | 2023-04-20 | 2021-06-28 | 3.5 | 3.79 | 3.49 | 3.7 | 0.002 | 0.42 | 0.0 | 0.04 | 14.10 | 0.00 | 2.073 | 4.61 | 0.00 | 2.0 | 98.0 | 0.0 | 1.13 | 0.77 | 0.72 | 1.17 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 16.69 | 0.00 | 2.069 | 15.15 | 0.51 | 3.5 | 96.5 | 0.0 | -0.01 | 0.84 | 0.80 | 0.78 | 1.48 | 54330 | 6774 | 32 | 0 | 10 | 0 | 0 | logfile |
✔ | 8GS2 | 34218 | 2023-04-24 | 2022-09-04 | 2.84 | 3.09 | 2.94 | 3.1 | 0.002 | 0.42 | 0.0 | 0.04 | 10.20 | 0.00 | 1.579 | 4.49 | 0.30 | 1.2 | 98.8 | 0.0 | 1.18 | 0.74 | 0.89 | 4.67 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.09 | 0.00 | 2.185 | 6.70 | 1.56 | 1.7 | 98.3 | 0.0 | 1.43 | 1.32 | 0.74 | 0.90 | 4.14 | 16935 | 1916 | 7 | 64 | 4 | 0 | 0 | logfile |
✔ | 7EoS | 31229 | 2023-04-27 | 2021-04-22 | 3.9 | 4.43 | — | 3.9 | 0.002 | 0.42 | 0.0 | 0.04 | 8.87 | 0.00 | 2.254 | 6.49 | 1.89 | 4.1 | 95.8 | 0.1 | 0.47 | 0.88 | 0.78 | 1.32 | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 12.42 | 0.00 | 2.139 | 12.94 | 0.34 | 6.1 | 93.9 | 0.1 | -0.43 | 1.30 | 0.90 | 0.83 | 1.30 | 24600 | 3106 | 8 | 0 | 18 | 0 | 0 | logfile |