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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oJN | 12956 | 2023-11-16 | 2021-05-16 | 2.92 | 3.27 | 2.89 | 2.9 | 0.004 | 0.41 | 0.0 | 0.04 | 9.24 | 0.00 | 1.859 | 3.51 | 0.93 | 4.7 | 95.2 | 0.1 | 0.93 | 0.88 | 0.83 | 3.05 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 12.79 | 0.00 | 2.079 | 5.38 | 1.20 | 4.9 | 95.1 | 0.0 | 0.81 | 2.62 | 0.91 | 0.90 | 2.99 | 16991 | 2010 | 6 | 39 | 7 | 0 | 0 | logfile |
✔ | 6W18 | 21503 | 2023-11-15 | 2020-03-03 | 4.2 | 4.20 | 4.18 | 4.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.01 | 0.00 | 2.196 | 4.75 | 0.00 | 3.0 | 97.0 | 0.0 | -3.43 | 0.71 | 0.62 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 12.93 | 0.00 | 2.101 | 9.37 | 0.18 | 7.3 | 92.7 | 0.0 | -1.63 | 1.34 | 0.77 | 0.71 | — | 13151 | 1837 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Xo3 | 33335 | 2023-11-13 | 2022-04-30 | 2.6 | 2.32 | 1.68 | 2.7 | 0.002 | 0.41 | 0.0 | 0.05 | 12.37 | 0.00 | 2.223 | 4.70 | 0.00 | 8.2 | 91.8 | 0.0 | -3.31 | 0.45 | 0.81 | 5.78 | 2.7 | 0.003 | 0.56 | 0.0 | 0.05 | 16.32 | 0.00 | 2.293 | 2.44 | 3.03 | 9.8 | 90.2 | 0.0 | -1.76 | 2.17 | 0.48 | 0.85 | 5.80 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TD2 | 25821 | 2023-11-15 | 2021-12-30 | 3.11 | 3.30 | — | 3.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.89 | 0.00 | 2.175 | 2.14 | 0.42 | 1.1 | 98.9 | 0.0 | -0.58 | 0.53 | 0.76 | 2.85 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 14.65 | 0.00 | 1.964 | 5.31 | 0.14 | 3.0 | 97.0 | 0.0 | 1.66 | 1.22 | 0.54 | 0.79 | 3.15 | 13528 | 904 | 5 | 0 | 1 | 0 | 6632 | logfile |
✔ | 7PiM | 13442 | 2023-11-15 | 2021-08-20 | 4.6 | 5.02 | 5.18 | 4.6 | 0.002 | 0.41 | 0.0 | 0.03 | 8.31 | 0.00 | 1.900 | 45.64 | 0.67 | 2.0 | 98.0 | 0.0 | 2.23 | 0.81 | 0.76 | — | 4.6 | 0.002 | 0.46 | 0.0 | 0.03 | 12.01 | 0.00 | 1.854 | 66.59 | 0.00 | 3.2 | 96.8 | 0.0 | 0.47 | 1.02 | 0.82 | 0.76 | — | 11844 | 1412 | 12 | 0 | 8 | 0 | 524 | logfile |
✔ | 8GS2 | 34218 | 2023-11-16 | 2022-09-04 | 2.84 | 3.09 | 2.94 | 3.1 | 0.002 | 0.42 | 0.0 | 0.04 | 10.20 | 0.00 | 1.579 | 4.49 | 0.30 | 1.2 | 98.8 | 0.0 | 1.18 | 0.74 | 0.89 | 4.67 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.15 | 0.00 | 2.178 | 6.89 | 1.56 | 1.7 | 98.3 | 0.0 | 1.44 | 1.33 | 0.73 | 0.89 | 4.10 | 16935 | 1916 | 7 | 64 | 4 | 0 | 0 | logfile |
✔ | 7EU8 | 31309 | 2023-11-17 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.42 | 0.0 | 0.10 | 8.09 | 0.00 | 2.206 | 3.16 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.002 | 0.66 | 0.0 | 0.06 | 8.70 | 0.00 | 2.123 | 8.02 | 0.00 | 4.7 | 95.1 | 0.2 | -0.32 | 1.42 | 0.79 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2023-11-15 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoS | 31229 | 2023-11-18 | 2021-04-22 | 3.9 | 4.43 | — | 3.9 | 0.002 | 0.42 | 0.0 | 0.04 | 8.87 | 0.00 | 2.254 | 6.49 | 1.89 | 4.1 | 95.8 | 0.1 | 0.47 | 0.88 | 0.78 | 1.32 | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 12.42 | 0.00 | 2.139 | 12.94 | 0.34 | 6.1 | 93.9 | 0.1 | -0.43 | 1.30 | 0.90 | 0.83 | 1.30 | 24600 | 3106 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 6QXF | 4668 | 2023-11-21 | 2019-03-07 | 3.6 | 4.31 | — | 3.6 | 0.002 | 0.42 | 0.0 | 0.04 | 11.08 | 0.00 | 2.203 | 7.01 | 0.73 | 2.2 | 97.7 | 0.1 | -1.19 | 0.90 | 0.86 | 1.38 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 14.05 | 0.00 | 2.106 | 11.03 | 0.10 | 2.3 | 97.6 | 0.1 | 1.79 | 2.77 | 0.89 | 0.86 | 1.53 | 34693 | 4088 | 30 | 50 | 8 | 0 | 0 | logfile |
✔ | 8E49 | 27884 | 2023-11-15 | 2022-08-17 | 2.05 | 2.78 | 2.50 | 2.5 | 0.005 | 0.42 | 0.0 | 0.03 | 12.76 | 0.02 | 1.945 | 1.31 | 0.85 | 4.6 | 95.4 | 0.0 | 0.91 | 0.71 | 0.91 | 5.79 | 2.6 | 0.005 | 0.60 | 0.0 | 0.04 | 13.62 | 0.01 | 1.890 | 2.36 | 1.17 | 5.2 | 94.8 | 0.1 | 0.08 | 0.21 | 0.70 | 0.92 | 5.87 | 115871 | 1179 | 11 | 3016 | 1 | 0 | 41885 | logfile |
✔ | 8E3o | 27869 | 2023-11-15 | 2022-08-17 | 1.99 | 2.75 | 2.52 | 2.6 | 0.006 | 0.42 | 0.0 | 0.05 | 12.90 | 0.02 | 1.955 | 2.37 | 0.74 | 4.6 | 95.1 | 0.3 | -2.75 | 0.70 | 0.88 | 5.93 | 2.5 | 0.006 | 0.63 | 0.0 | 0.04 | 14.04 | 0.01 | 1.947 | 3.98 | 1.59 | 5.5 | 94.3 | 0.2 | 0.06 | 1.00 | 0.69 | 0.89 | 5.70 | 115702 | 1179 | 11 | 3015 | 2 | 0 | 41809 | logfile |
✔ | 8E3M | 27868 | 2023-11-15 | 2022-08-17 | 2.25 | 2.92 | 2.58 | 2.7 | 0.005 | 0.42 | 0.0 | 0.07 | 13.14 | 0.02 | 1.973 | 2.01 | 1.27 | 4.0 | 96.0 | 0.0 | 0.83 | 0.71 | 0.91 | 5.18 | 2.7 | 0.005 | 0.62 | 0.0 | 0.04 | 14.24 | 0.01 | 1.964 | 3.51 | 1.27 | 5.1 | 94.8 | 0.2 | 0.20 | 0.25 | 0.69 | 0.90 | 5.59 | 115715 | 1179 | 11 | 3016 | 1 | 0 | 41815 | logfile |
✔ | 8DK1 | 27480 | 2023-11-17 | 2022-07-01 | 2.95 | 3.68 | 3.03 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 9.97 | 0.00 | 2.294 | 2.83 | 1.44 | 3.3 | 96.7 | 0.0 | 2.11 | 0.85 | 0.90 | 2.51 | 3.4 | 0.002 | 0.51 | 0.0 | 0.04 | 12.85 | 0.00 | 2.260 | 3.98 | 1.49 | 3.6 | 96.4 | 0.0 | 2.59 | 0.62 | 0.85 | 0.90 | 2.22 | 19500 | 2446 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T8C | 25744 | 2023-11-20 | 2021-12-16 | 4.5 | 3.21 | 4.51 | 4.6 | 0.001 | 0.42 | 0.0 | 0.04 | 7.59 | 0.00 | 2.347 | 5.08 | 0.41 | 3.6 | 96.4 | 0.0 | 0.76 | 0.63 | 0.54 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.04 | 10.96 | 0.00 | 2.130 | 11.08 | 0.00 | 4.6 | 95.4 | 0.0 | 0.62 | 1.08 | 0.66 | 0.61 | — | 28952 | 3626 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-11-13 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BB1 | 15953 | 2023-11-16 | 2022-10-12 | 2.8 | 3.65 | 2.86 | 3.3 | 0.003 | 0.42 | 0.0 | 0.04 | 10.05 | 0.01 | 2.226 | 3.53 | 0.71 | 2.0 | 98.0 | 0.0 | 0.54 | 0.89 | 0.88 | 4.07 | 3.3 | 0.004 | 0.66 | 0.0 | 0.04 | 12.79 | 0.00 | 2.165 | 8.31 | 1.47 | 2.1 | 97.9 | 0.0 | 0.66 | 2.28 | 0.88 | 0.86 | 3.72 | 16168 | 2100 | 20 | 0 | 4 | 24 | 0 | logfile |
✔ | 7T4N | 25681 | 2023-11-13 | 2021-12-10 | 2.35 | 2.66 | 2.38 | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 16.22 | 0.00 | 2.207 | 4.39 | 1.25 | 1.0 | 99.0 | 0.0 | 0.87 | 0.63 | 0.85 | 3.82 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 16.48 | 0.00 | 2.284 | 5.93 | 1.53 | 1.0 | 99.0 | 0.0 | 1.61 | 0.24 | 0.66 | 0.87 | 3.71 | 6476 | 803 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EBF | 31053 | 2023-11-15 | 2021-03-09 | 2.63 | 2.31 | — | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 11.01 | 0.00 | 2.294 | 5.76 | 2.11 | 2.0 | 98.0 | 0.0 | 1.61 | 0.65 | 0.78 | 2.64 | 2.3 | 0.003 | 0.52 | 0.0 | 0.04 | 15.90 | 0.00 | 2.270 | 8.68 | 2.56 | 2.9 | 97.1 | 0.0 | 1.11 | 0.55 | 0.67 | 0.81 | 2.90 | 13052 | 1640 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iP3 | 35630 | 2023-11-15 | 2023-03-14 | 2.6 | 3.21 | 2.64 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 10.76 | 0.00 | 2.255 | 5.46 | 0.00 | 1.9 | 98.1 | 0.0 | 3.79 | 0.76 | 0.84 | 3.68 | 3.0 | 0.003 | 0.47 | 0.0 | 0.04 | 13.60 | 0.00 | 2.264 | 6.70 | 1.06 | 2.0 | 98.0 | 0.0 | 3.60 | 0.34 | 0.71 | 0.81 | 3.55 | 12868 | 1595 | 10 | 0 | 13 | 0 | 0 | logfile |