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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8EW3 | 28641 | 2023-04-22 | 2022-10-21 | 2.65159 | 3.20 | 2.63 | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 10.09 | 0.00 | 2.260 | 2.58 | 0.16 | 1.7 | 98.3 | 0.0 | 1.12 | 0.78 | 0.90 | 4.36 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 13.31 | 0.00 | 1.077 | 6.08 | 0.56 | 1.8 | 98.2 | 0.0 | 1.38 | 1.18 | 0.75 | 0.89 | 3.39 | 11902 | 1540 | 9 | 0 | 5 | 0 | 0 | logfile |
✔ | 7R88 | 24311 | 2023-04-21 | 2021-06-26 | 3.5 | 3.76 | — | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 12.49 | 0.00 | 2.274 | 5.35 | 1.02 | 3.5 | 96.5 | 0.0 | -1.50 | 0.69 | 0.85 | 2.38 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 15.10 | 0.00 | 2.222 | 6.59 | 0.25 | 4.4 | 95.6 | 0.0 | 1.28 | 1.34 | 0.71 | 0.88 | 2.75 | 10787 | 1368 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S0F | 24789 | 2023-04-23 | 2021-08-30 | 2.96 | 3.06 | — | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 13.98 | 0.00 | 1.994 | 3.24 | 1.74 | 2.6 | 97.3 | 0.1 | -1.72 | 0.49 | 0.74 | 2.57 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 16.82 | 0.00 | 2.134 | 5.83 | 3.21 | 3.5 | 96.4 | 0.1 | 0.82 | 1.33 | 0.51 | 0.79 | 2.45 | 13885 | 892 | 5 | 0 | 1 | 0 | 6887 | logfile |
✔ | 7JiC | 22344 | 2023-04-20 | 2020-07-23 | 3.8 | 4.28 | 3.86 | 4.1 | 0.002 | 0.45 | 0.0 | 0.04 | 9.26 | 0.00 | 2.241 | 5.66 | 0.00 | 4.4 | 95.6 | 0.0 | -1.97 | 0.68 | 0.80 | 2.30 | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.28 | 0.00 | 2.237 | 10.88 | 0.35 | 3.4 | 96.6 | 0.0 | 0.17 | 2.01 | 0.69 | 0.81 | 2.57 | 5980 | 842 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Yoo | 33985 | 2023-04-21 | 2022-08-01 | 3.11 | 2.28 | — | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 13.30 | 0.00 | 2.153 | 3.82 | 0.00 | 1.7 | 98.3 | 0.0 | -0.16 | 0.78 | 0.81 | 3.56 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 15.22 | 0.00 | 2.198 | 4.86 | 0.40 | 2.4 | 97.6 | 0.0 | 0.78 | 0.93 | 0.79 | 0.84 | 3.27 | 9188 | 1169 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NKD | 12438 | 2023-04-21 | 2021-02-17 | 3.12 | 3.57 | — | 3.2 | 0.003 | 0.45 | 0.0 | 0.04 | 14.50 | 0.00 | 2.134 | 6.59 | 0.00 | 1.7 | 98.3 | 0.0 | 2.45 | 0.85 | 0.81 | 2.57 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 15.43 | 0.00 | 2.128 | 7.12 | 0.00 | 1.5 | 98.5 | 0.0 | 3.15 | 0.91 | 0.85 | 0.83 | 2.19 | 9555 | 643 | 8 | 0 | 0 | 0 | 4768 | logfile |
✔ | 7EPD | 31238 | 2023-04-24 | 2021-04-26 | 3.9 | 2.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 12.27 | 0.00 | 2.232 | 7.06 | 0.00 | 4.0 | 96.0 | 0.0 | -2.46 | 0.69 | 0.63 | 0.57 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 14.15 | 0.00 | 2.224 | 13.87 | 0.45 | 5.3 | 94.7 | 0.0 | 0.04 | 1.20 | 0.75 | 0.74 | 1.44 | 10710 | 1569 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LZE | 23605 | 2023-04-20 | 2021-03-09 | 3.23 | 3.26 | 3.28 | 3.6 | 0.003 | 0.45 | 0.0 | 0.04 | 13.89 | 0.00 | 2.222 | 3.40 | 0.11 | 8.4 | 91.6 | 0.0 | -0.70 | 0.76 | 0.82 | 3.47 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 14.97 | 0.00 | 2.153 | 3.27 | 0.00 | 7.7 | 92.3 | 0.0 | -0.99 | 1.12 | 0.77 | 0.85 | 2.67 | 7842 | 1011 | 9 | 0 | 9 | 0 | 0 | logfile |
✔ | 7Z4C | 14493 | 2023-04-24 | 2022-03-03 | 3.87 | 5.00 | 3.91 | 4.1 | 0.003 | 0.45 | 0.0 | 0.03 | 15.32 | 0.00 | 2.232 | 8.05 | 2.06 | 2.5 | 97.5 | 0.0 | 1.06 | 0.91 | 0.83 | 1.82 | 4.1 | 0.003 | 0.58 | 0.0 | 0.04 | 16.67 | 0.00 | 2.163 | 12.60 | 0.08 | 2.9 | 97.1 | 0.0 | 1.05 | 0.96 | 0.91 | 0.84 | 1.31 | 14180 | 1357 | 4 | 148 | 0 | 0 | 0 | logfile |
✔ | 7WSH | 32758 | 2023-04-22 | 2022-01-29 | 2.89 | 3.01 | — | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 9.90 | 0.00 | 2.140 | 5.01 | 0.72 | 1.9 | 98.1 | 0.0 | -0.03 | 0.69 | 0.82 | 4.30 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.50 | 0.00 | 2.123 | 9.77 | 2.01 | 1.8 | 98.2 | 0.0 | 1.20 | 0.84 | 0.72 | 0.85 | 3.53 | 6457 | 793 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7NVW | 12615 | 2023-04-26 | 2021-03-16 | 4.3 | 4.32 | 4.26 | 4.2 | 0.002 | 0.45 | 0.0 | 0.04 | 15.45 | 0.00 | 1.971 | 6.64 | 0.00 | 4.4 | 95.6 | 0.0 | 0.80 | 0.71 | 0.66 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 15.77 | 0.00 | 2.146 | 15.97 | 0.00 | 4.7 | 95.2 | 0.0 | -0.42 | 1.05 | 0.73 | 0.68 | — | 23647 | 2814 | 17 | 42 | 35 | 0 | 0 | logfile |
✔ | 7WVV | 32859 | 2023-04-20 | 2022-02-11 | 2.9 | 3.01 | — | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 12.21 | 0.00 | 2.286 | 7.42 | 0.00 | 2.2 | 97.8 | 0.0 | 0.74 | 0.59 | 0.74 | 2.55 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.35 | 0.00 | 2.136 | 9.20 | 1.89 | 2.9 | 97.1 | 0.0 | 0.43 | 0.45 | 0.62 | 0.79 | 2.80 | 7020 | 911 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o75 | 12745 | 2023-04-27 | 2021-04-13 | 3.2 | 3.22 | 3.23 | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 14.79 | 0.00 | 1.921 | 3.96 | 0.00 | 2.4 | 97.6 | 0.0 | 1.58 | 0.70 | 0.77 | 2.41 | 3.1 | 0.006 | 0.64 | 0.0 | 0.04 | 17.26 | 0.00 | 1.890 | 8.96 | 0.30 | 3.6 | 96.4 | 0.0 | 0.38 | 1.21 | 0.74 | 0.80 | 2.31 | 73885 | 8901 | 43 | 127 | 22 | 0 | 0 | logfile |
✔ | 7E33 | 30975 | 2023-04-20 | 2021-02-07 | 2.9 | 3.20 | — | 3.2 | 0.004 | 0.45 | 0.0 | 0.04 | 12.77 | 0.00 | 1.918 | 6.58 | 0.00 | 1.2 | 98.8 | 0.0 | 2.41 | 0.63 | 0.74 | 2.39 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 16.06 | 0.00 | 2.023 | 10.69 | 1.07 | 2.2 | 97.8 | 0.0 | 1.11 | 1.57 | 0.62 | 0.78 | 2.88 | 8538 | 1086 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7EoU | 31231 | 2023-04-27 | 2021-04-22 | 4.3 | 4.50 | — | 4.2 | 0.002 | 0.45 | 0.0 | 0.04 | 8.94 | 0.00 | 2.243 | 9.16 | 1.92 | 3.9 | 96.0 | 0.1 | 0.78 | 0.86 | 0.73 | — | 4.2 | 0.003 | 0.63 | 0.0 | 0.04 | 11.29 | 0.00 | 2.097 | 17.59 | 0.00 | 6.7 | 93.2 | 0.1 | -0.41 | 1.64 | 0.89 | 0.80 | — | 24593 | 3084 | 8 | 0 | 19 | 0 | 0 | logfile |
✔ | 7Z4H | 14497 | 2023-04-24 | 2022-03-03 | 3.49 | 4.59 | 3.66 | 3.8 | 0.003 | 0.45 | 0.0 | 0.03 | 13.12 | 0.00 | 2.043 | 9.94 | 1.25 | 2.0 | 98.0 | 0.0 | 1.67 | 0.90 | 0.83 | 1.71 | 3.8 | 0.003 | 0.55 | 0.0 | 0.04 | 14.92 | 0.00 | 2.146 | 13.75 | 0.25 | 2.3 | 97.7 | 0.0 | 1.41 | 1.66 | 0.91 | 0.86 | 1.89 | 13900 | 1334 | 4 | 142 | 0 | 0 | 0 | logfile |
✔ | 7QN8 | 14070 | 2023-04-24 | 2021-12-20 | 3.1 | 3.39 | — | 3.2 | 0.003 | 0.46 | 0.0 | 0.04 | 8.31 | 0.00 | 2.247 | 3.93 | 0.34 | 0.5 | 99.5 | 0.0 | 2.21 | 0.79 | 0.86 | 3.96 | 3.1 | 0.002 | 0.60 | 0.0 | 0.04 | 13.15 | 0.00 | 2.165 | 7.74 | 0.68 | 1.4 | 98.6 | 0.0 | 1.83 | 0.81 | 0.80 | 0.90 | 3.98 | 16755 | 1992 | 19 | 0 | 32 | 0 | 0 | logfile |
✔ | 7RZS | 24776 | 2023-04-19 | 2021-08-27 | 2.52 | 2.32 | — | 2.1 | 0.005 | 0.46 | 0.0 | 0.03 | 14.73 | 0.00 | 2.273 | 3.04 | 0.00 | 1.0 | 99.0 | 0.0 | 1.98 | 0.77 | 0.79 | 1.82 | 2.0 | 0.003 | 0.42 | 0.0 | 0.04 | 16.16 | 0.00 | 2.327 | 4.66 | 0.35 | 0.0 | 100.0 | 0.0 | 5.95 | 1.19 | 0.79 | 0.82 | 1.19 | 2445 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z4i | 14498 | 2023-04-23 | 2022-03-03 | 3.12 | 3.94 | 3.16 | 3.5 | 0.003 | 0.46 | 0.0 | 0.04 | 15.03 | 0.00 | 2.236 | 7.91 | 0.58 | 1.5 | 98.5 | 0.0 | 0.81 | 0.86 | 0.82 | 2.56 | 3.5 | 0.004 | 0.51 | 0.0 | 0.04 | 16.22 | 0.00 | 2.153 | 9.27 | 0.17 | 2.2 | 97.8 | 0.0 | 1.51 | 2.26 | 0.87 | 0.84 | 2.63 | 13820 | 1338 | 5 | 137 | 2 | 0 | 0 | logfile |
✔ | 7ZZQ | 15039 | 2023-04-25 | 2022-05-26 | 2.6 | 3.53 | 2.62 | 3.0 | 0.002 | 0.46 | 0.0 | 0.04 | 18.37 | 0.00 | 2.094 | 5.12 | 1.18 | 1.9 | 98.1 | 0.0 | 1.31 | 0.88 | 0.83 | 3.23 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.66 | 0.00 | 2.112 | 8.65 | 1.60 | 1.8 | 98.1 | 0.0 | 1.78 | 0.71 | 0.91 | 0.93 | 2.78 | 19527 | 2468 | 46 | 0 | 0 | 105 | 0 | logfile |