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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SAM | 24952 | 2023-02-17 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.88 | 0.0 | 0.04 | 22.84 | 0.01 | 1.820 | 82.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.78 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 6XF6 | 22162 | 2023-02-24 | 2020-06-15 | 4.0 | 4.88 | 4.07 | 4.1 | 0.004 | 0.77 | 0.0 | 0.06 | 11.35 | 0.01 | 2.249 | 3.71 | 0.21 | 2.6 | 97.4 | 0.0 | 0.03 | 0.85 | 0.78 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 12.83 | 0.00 | 2.105 | 12.62 | 0.13 | 3.6 | 96.4 | 0.0 | 0.41 | 1.23 | 0.87 | 0.84 | — | 22938 | 2928 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 6VXX | 24693 | 2023-02-24 | 2020-02-25 | 2.8 | 3.28 | 2.89 | 39.0 | 0.016 | 1.35 | 0.0 | 0.09 | 10.67 | 0.01 | 2.389 | 0.81 | 0.23 | 2.4 | 97.6 | 0.0 | 0.27 | 0.07 | 0.00 | 0.14 | 2.8 | 0.003 | 0.69 | 0.0 | 0.05 | 13.86 | 0.00 | 2.095 | 12.22 | 2.00 | 3.9 | 96.1 | 0.0 | -0.28 | 1.68 | 0.14 | 0.11 | 0.11 | 23694 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7RU3 | 24695 | 2023-02-26 | 2021-08-16 | 3.3 | 4.03 | 3.38 | 3.7 | 0.022 | 1.84 | 0.0 | 0.11 | 10.60 | 0.01 | 2.056 | 1.17 | 0.32 | 3.2 | 96.8 | 0.0 | 0.61 | 0.84 | 0.81 | 2.55 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 13.37 | 0.00 | 2.145 | 8.96 | 0.19 | 3.8 | 96.0 | 0.1 | 0.40 | 0.73 | 0.85 | 0.84 | 1.94 | 28157 | 3537 | 16 | 0 | 42 | 0 | 0 | logfile |
✔ | 6M7D | 30129 | 2023-02-17 | 2020-03-18 | 2.9 | 2.82 | — | 2.8 | 0.010 | 1.03 | 0.0 | 0.07 | 13.84 | 0.00 | 2.157 | 15.48 | 0.58 | 2.4 | 97.6 | 0.0 | -0.46 | 0.35 | 0.86 | 4.08 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.72 | 0.00 | 2.232 | 8.89 | 1.46 | 1.5 | 98.5 | 0.0 | 2.16 | 0.85 | 0.34 | 0.88 | 3.05 | 3280 | 412 | 2 | 6 | 0 | 0 | 0 | logfile |
✔ | 8B9Z | 15936 | 2023-02-25 | 2022-10-10 | 3.28 | 3.47 | 3.46 | 3.3 | 0.008 | 0.86 | 0.0 | 0.84 | 14.70 | 0.01 | 1.929 | 6.28 | 0.00 | 3.8 | 96.2 | 0.0 | -0.52 | 0.80 | 0.84 | 3.18 | 3.3 | 0.007 | 1.35 | 0.0 | 0.26 | 15.95 | 0.00 | 2.073 | 9.37 | 0.24 | 3.0 | 97.0 | 0.0 | 0.86 | 0.44 | 0.81 | 0.86 | 2.65 | 66970 | 8178 | 64 | 0 | 39 | 0 | 0 | logfile |
✔ | 7BC5 | 12139 | 2023-02-16 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RU1 | 24693 | 2023-02-25 | 2021-08-16 | 2.8 | 3.31 | 2.92 | 3.2 | 0.020 | 1.77 | 0.0 | 0.11 | 10.19 | 0.01 | 2.402 | 0.79 | 0.00 | 3.0 | 97.0 | 0.0 | 0.58 | 0.80 | 0.82 | 5.05 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 14.42 | 0.00 | 2.156 | 4.88 | 1.67 | 3.7 | 96.2 | 0.1 | 0.17 | 1.21 | 0.78 | 0.82 | 4.45 | 26493 | 3294 | 18 | 0 | 54 | 0 | 0 | logfile |
✔ | 5MS1 | 3562 | 2023-02-17 | 2016-12-29 | 4.25 | 4.22 | — | 4.2 | 0.014 | 1.51 | 0.0 | 0.07 | 9.30 | 0.01 | 2.413 | 2.10 | 0.00 | 5.5 | 93.5 | 1.1 | -0.81 | 0.37 | 0.76 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 12.42 | 0.00 | 2.162 | 9.67 | 0.00 | 2.9 | 97.1 | 0.0 | -0.77 | 1.54 | 0.46 | 0.85 | — | 4350 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B93 | 12095 | 2023-02-26 | 2020-12-14 | 3.04 | 3.13 | 3.09 | 3.0 | 0.006 | 0.81 | 0.0 | 1.03 | 14.70 | 0.00 | 1.904 | 7.72 | 0.03 | 4.1 | 95.9 | 0.0 | -3.26 | 0.76 | 0.85 | 4.00 | 3.0 | 0.008 | 1.59 | 0.0 | 0.31 | 15.82 | 0.00 | 1.949 | 7.99 | 0.14 | 3.1 | 96.9 | 0.0 | 0.99 | 1.17 | 0.77 | 0.88 | 3.14 | 67492 | 8235 | 67 | 0 | 35 | 0 | 0 | logfile |
✔ | 6TMJ | 10523 | 2023-02-22 | 2019-12-04 | 3.5 | 3.68 | 3.39 | 3.7 | 0.007 | 0.62 | 0.0 | 0.04 | 13.81 | 0.01 | 2.037 | 6.53 | 0.00 | 8.7 | 91.3 | 0.0 | -4.51 | 0.56 | 0.81 | 2.54 | 3.7 | 0.003 | 0.56 | 0.0 | 0.04 | 15.61 | 0.00 | 2.090 | 6.58 | 0.43 | 3.5 | 96.5 | 0.0 | 1.78 | 1.41 | 0.63 | 0.83 | 2.29 | 18084 | 1204 | 15 | 0 | 0 | 0 | 9178 | logfile |
✔ | 7K8X | 22734 | 2023-02-27 | 2020-09-27 | 3.9 | 4.42 | — | 4.1 | 0.002 | 0.60 | 0.0 | 0.06 | 13.08 | 0.00 | 1.857 | 13.43 | 2.49 | 3.3 | 96.4 | 0.3 | -2.04 | 0.76 | 0.69 | 1.31 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.35 | 0.00 | 2.127 | 12.49 | 0.23 | 4.6 | 95.4 | 0.0 | 0.02 | 1.18 | 0.80 | 0.83 | 1.72 | 27399 | 3478 | 10 | 0 | 28 | 0 | 0 | logfile |
✔ | 8B0J | 15785 | 2023-02-26 | 2022-09-07 | 3.99 | 4.45 | 4.02 | 4.1 | 0.009 | 1.30 | 0.0 | 0.08 | 19.83 | 0.01 | 1.945 | 11.42 | 0.00 | 9.7 | 90.3 | 0.0 | -2.43 | 0.73 | 0.68 | 1.71 | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 19.52 | 0.00 | 1.931 | 14.86 | 0.48 | 5.0 | 95.0 | 0.0 | 0.11 | 1.39 | 0.75 | 0.74 | 1.68 | 28636 | 1931 | 7 | 160 | 0 | 0 | 12434 | logfile |
✔ | 6TMi | 10522 | 2023-02-19 | 2019-12-04 | 3.5 | 3.96 | 3.49 | 3.8 | 0.006 | 0.64 | 0.0 | 0.04 | 16.16 | 0.01 | 2.113 | 9.16 | 0.58 | 10.0 | 90.0 | 0.0 | -4.41 | 0.53 | 0.77 | 1.38 | 3.8 | 0.004 | 0.64 | 0.0 | 0.03 | 17.16 | 0.00 | 2.134 | 9.37 | 0.19 | 7.8 | 92.2 | 0.0 | 0.56 | 1.46 | 0.53 | 0.80 | 1.70 | 9606 | 605 | 5 | 0 | 0 | 0 | 4842 | logfile |
✔ | 7oNB | 12994 | 2023-02-23 | 2021-05-25 | 3.1 | 3.40 | 3.04 | 3.0 | 0.005 | 1.01 | 0.0 | 0.06 | 13.91 | 0.01 | 2.273 | 5.59 | 0.00 | 3.6 | 96.4 | 0.0 | -1.28 | 0.76 | 0.71 | 1.66 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 15.77 | 0.00 | 2.163 | 11.13 | 0.16 | 3.0 | 97.0 | 0.0 | -0.08 | 0.79 | 0.80 | 0.82 | 2.26 | 20140 | 2568 | 14 | 46 | 6 | 0 | 0 | logfile |
✔ | 7M3N | 23658 | 2023-02-17 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | 2.0 | 0.002 | 0.55 | 0.0 | 0.04 | 16.96 | 0.00 | 2.273 | 6.81 | 2.75 | 3.7 | 96.3 | 0.0 | -0.46 | 0.48 | 0.45 | 0.84 | 4.74 | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8AVV | 15684 | 2023-02-18 | 2022-08-27 | 3.4 | 3.53 | 3.39 | 3.5 | 0.008 | 1.38 | 0.0 | 0.08 | 18.27 | 0.01 | 2.580 | 1.80 | 5.03 | 4.7 | 95.1 | 0.2 | -3.08 | 0.76 | 0.87 | 2.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7794 | 1010 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7K8Y | 22735 | 2023-02-26 | 2020-09-27 | 4.4 | 5.34 | — | 4.4 | 0.002 | 0.53 | 0.0 | 0.05 | 10.71 | 0.00 | 1.137 | 21.70 | 0.04 | 2.8 | 97.0 | 0.3 | -2.11 | 0.80 | 0.77 | — | 4.4 | 0.005 | 0.75 | 0.0 | 0.05 | 11.59 | 0.00 | 1.985 | 25.96 | 0.00 | 7.4 | 92.5 | 0.2 | -1.14 | 1.18 | 0.82 | 0.83 | — | 25560 | 3242 | 8 | 0 | 23 | 0 | 0 | logfile |
✔ | 6RFS | 4874 | 2023-02-23 | 2019-04-16 | 4.04 | 4.52 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.94 | 10.33 | 0.01 | 2.078 | 8.88 | 0.15 | 8.3 | 91.5 | 0.2 | -4.08 | 0.83 | 0.83 | — | 4.1 | 0.008 | 1.57 | 0.0 | 0.29 | 11.95 | 0.00 | 2.089 | 15.73 | 0.00 | 5.9 | 94.1 | 0.0 | -0.68 | 1.38 | 0.83 | 0.84 | — | 60966 | 7685 | 49 | 0 | 12 | 0 | 0 | logfile |
✔ | 7RU5 | 24697 | 2023-02-26 | 2021-08-16 | 3.6 | 4.35 | 3.76 | 3.7 | 0.020 | 1.81 | 0.0 | 0.11 | 10.31 | 0.01 | 2.413 | 0.95 | 0.06 | 2.9 | 97.1 | 0.0 | 0.47 | 0.84 | 0.72 | 2.57 | 3.8 | 0.004 | 0.65 | 0.0 | 0.04 | 12.62 | 0.00 | 2.143 | 11.58 | 0.13 | 4.2 | 95.7 | 0.1 | 0.17 | 0.62 | 0.85 | 0.77 | 1.98 | 28673 | 3611 | 20 | 0 | 40 | 0 | 0 | logfile |