The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6UKS | 20811 | 2023-08-25 | 2019-10-05 | 3.2 | 2.36 | — | 3.2 | 0.009 | 0.88 | 0.0 | 0.05 | 14.20 | 0.01 | 2.007 | 2.74 | 0.32 | 8.4 | 91.6 | 0.0 | -3.37 | 0.76 | 0.80 | 3.01 | 3.2 | 0.005 | 0.59 | 0.0 | 0.04 | 16.31 | 0.00 | 1.891 | 7.23 | 0.14 | 6.0 | 94.0 | 0.0 | -0.76 | 1.08 | 0.77 | 0.84 | 3.04 | 40838 | 2534 | 14 | 0 | 14 | 0 | 20160 | logfile |
✔ | 6VQT | 21356 | 2023-08-11 | 2020-02-05 | 3.03 | 4.54 | 3.09 | 4.1 | 0.009 | 1.15 | 0.0 | 0.06 | 16.32 | 0.01 | 1.733 | 10.32 | 4.94 | 2.7 | 97.3 | 0.0 | 1.39 | 0.78 | 0.80 | 1.43 | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 16.60 | 0.00 | 1.052 | 9.77 | 0.32 | 3.0 | 97.0 | 0.0 | 2.30 | 1.06 | 0.77 | 0.84 | 1.48 | 9144 | 1168 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7N73 | 24218 | 2023-08-10 | 2021-06-09 | 2.9 | 3.46 | 2.99 | 3.3 | 0.006 | 1.27 | 0.0 | 0.06 | 13.02 | 0.00 | 1.850 | 7.76 | 0.00 | 2.6 | 97.4 | 0.0 | 1.31 | 0.71 | 0.85 | 2.86 | 3.3 | 0.003 | 0.87 | 0.0 | 0.04 | 14.40 | 0.00 | 2.044 | 6.12 | 1.09 | 2.1 | 97.9 | 0.0 | 2.37 | 0.34 | 0.69 | 0.84 | 2.37 | 7866 | 1036 | 1 | 0 | 6 | 3 | 0 | logfile |
✔ | 7TVi | 26141 | 2023-08-13 | 2022-02-04 | 3.2 | 3.59 | 2.45 | 3.5 | 0.005 | 0.82 | 0.0 | 0.05 | 14.00 | 0.01 | 2.228 | 5.20 | 0.07 | 2.6 | 97.4 | 0.0 | -0.83 | 0.67 | 0.67 | 0.72 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 16.32 | 0.00 | 2.191 | 8.80 | 0.46 | 2.2 | 97.8 | 0.0 | -0.19 | 1.50 | 0.74 | 0.79 | 1.98 | 13746 | 1687 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6A6B | 6988 | 2023-08-09 | 2018-06-27 | 3.07 | 3.41 | 2.07 | 3.4 | 0.006 | 1.07 | 0.0 | 0.07 | 7.61 | 0.00 | 2.263 | 7.15 | 0.00 | 11.3 | 88.7 | 0.0 | -3.85 | 0.53 | 0.71 | 3.91 | 3.4 | 0.006 | 0.78 | 0.0 | 0.05 | 13.53 | 0.00 | 2.139 | 17.09 | 0.37 | 10.4 | 89.6 | 0.0 | -2.88 | 2.17 | 0.52 | 0.71 | 2.87 | 5256 | 756 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ET6 | 28586 | 2023-08-10 | 2022-10-16 | 3.57 | 3.92 | 3.77 | 3.9 | 0.003 | 0.53 | 0.0 | 0.04 | 11.62 | 0.00 | 1.831 | 5.02 | 0.47 | 3.6 | 96.4 | 0.0 | 0.54 | 0.52 | 0.71 | 1.69 | 3.9 | 0.004 | 0.59 | 0.0 | 0.03 | 15.13 | 0.00 | 1.948 | 8.58 | 0.00 | 5.5 | 94.5 | 0.0 | 1.04 | 1.37 | 0.51 | 0.72 | 1.53 | 8092 | 532 | 2 | 0 | 2 | 0 | 4007 | logfile |
✔ | 7VYS | 32214 | 2023-08-25 | 2021-11-15 | 2.5 | 2.59 | — | 2.6 | 0.008 | 0.85 | 0.0 | 0.04 | 18.82 | 0.01 | 1.328 | 6.47 | 0.97 | 3.5 | 96.4 | 0.1 | 1.73 | 0.76 | 0.91 | 4.14 | 2.6 | 0.003 | 0.55 | 0.0 | 0.04 | 17.80 | 0.00 | 2.106 | 6.03 | 1.55 | 3.3 | 96.6 | 0.1 | 1.84 | 0.59 | 0.75 | 0.91 | 4.06 | 40113 | 4727 | 64 | 0 | 27 | 425 | 0 | logfile |
✔ | 7WXW | 32882 | 2023-08-10 | 2022-02-15 | 2.84 | 2.24 | — | 2.1 | 0.005 | 0.78 | 0.0 | 0.05 | 12.89 | 0.01 | 2.256 | 1.29 | 0.00 | 4.4 | 95.6 | 0.0 | -2.04 | 0.75 | 0.75 | 3.34 | 2.0 | 0.004 | 0.60 | 0.0 | 0.04 | 15.75 | 0.00 | 2.196 | 5.30 | 1.58 | 2.8 | 97.2 | 0.0 | 0.32 | 1.17 | 0.78 | 0.78 | 2.66 | 8121 | 1032 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V4N | 21042 | 2023-08-18 | 2019-11-28 | 2.5 | 2.75 | — | 2.7 | 0.009 | 0.79 | 0.0 | 0.07 | 13.84 | 0.01 | 1.991 | 4.86 | 1.03 | 6.4 | 93.5 | 0.0 | -3.16 | 0.76 | 0.85 | 3.84 | 2.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.67 | 0.00 | 2.168 | 4.84 | 1.43 | 3.5 | 96.5 | 0.0 | -0.65 | 1.97 | 0.76 | 0.87 | 3.59 | 25866 | 3286 | 40 | 0 | 36 | 182 | 0 | logfile |
✔ | 7RX3 | 24723 | 2023-08-11 | 2021-08-21 | 3.3 | 3.49 | — | 3.4 | 0.009 | 1.37 | 0.0 | 0.06 | 18.79 | 0.01 | 2.327 | 6.98 | 0.20 | 7.5 | 92.5 | 0.0 | -3.98 | 0.74 | 0.84 | 3.22 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 16.75 | 0.00 | 2.215 | 4.92 | 0.30 | 7.1 | 92.9 | 0.0 | 0.82 | 0.54 | 0.74 | 0.86 | 2.78 | 10130 | 1182 | 4 | 0 | 16 | 0 | 0 | logfile |
✔ | 7WQZ | 32716 | 2023-08-09 | 2022-01-26 | 3.7 | 4.25 | — | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 10.18 | 0.00 | 2.272 | 9.90 | 2.13 | 8.5 | 91.5 | 0.0 | -4.46 | 0.81 | 0.74 | 1.55 | 4.0 | 0.003 | 0.81 | 0.0 | 0.05 | 13.97 | 0.00 | 2.161 | 18.77 | 0.95 | 12.0 | 87.8 | 0.2 | -3.10 | 0.73 | 0.83 | 0.78 | 1.75 | 3974 | 496 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 7VUG | 32127 | 2023-08-11 | 2021-11-02 | 3.2 | 2.20 | — | 2.0 | 0.004 | 0.61 | 0.0 | 0.04 | 13.57 | 0.00 | 2.099 | 11.94 | 0.00 | 6.3 | 93.7 | 0.0 | -0.75 | 0.73 | 0.72 | 2.48 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 15.83 | 0.00 | 1.991 | 13.01 | 0.20 | 5.5 | 94.5 | 0.0 | -0.68 | 0.34 | 0.73 | 0.74 | 2.08 | 8924 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WR7 | 32717 | 2023-08-09 | 2022-01-26 | 3.1 | 3.81 | — | 3.8 | 0.005 | 0.60 | 0.0 | 0.04 | 9.68 | 0.00 | 2.309 | 10.13 | 3.29 | 9.1 | 90.9 | 0.0 | -4.53 | 0.72 | 0.72 | 2.80 | 3.8 | 0.004 | 0.71 | 0.0 | 0.05 | 14.52 | 0.00 | 2.151 | 14.36 | 0.47 | 12.8 | 87.2 | 0.0 | -2.78 | 1.24 | 0.69 | 0.72 | 2.58 | 3995 | 496 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 7UWN | 26837 | 2023-08-11 | 2022-05-03 | 3.01 | 2.26 | 3.04 | 1.6 | 0.004 | 0.64 | 0.0 | 0.04 | 16.59 | 0.00 | 2.105 | 14.51 | 2.21 | 6.1 | 93.9 | 0.0 | -1.09 | 0.66 | 0.63 | 1.06 | 1.5 | 0.004 | 0.65 | 0.0 | 0.05 | 16.70 | 0.00 | 2.117 | 15.57 | 0.51 | 6.0 | 94.0 | 0.0 | -1.14 | 0.33 | 0.66 | 0.64 | 0.94 | 10602 | 1325 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 8JoL | 36459 | 2023-08-10 | 2023-06-07 | 3.0 | 3.98 | 2.98 | 3.4 | 0.009 | 1.46 | 0.0 | 0.07 | 17.24 | 0.01 | 2.214 | 35.79 | 16.43 | 12.3 | 86.8 | 0.8 | -4.77 | 0.56 | 0.70 | 0.79 | 3.4 | 0.003 | 0.83 | 0.0 | 0.04 | 16.02 | 0.00 | 1.975 | 9.53 | 1.43 | 3.5 | 96.5 | 0.0 | 0.45 | 2.18 | 0.62 | 0.88 | 1.90 | 8513 | 1087 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Mi4 | 23839 | 2023-08-14 | 2021-04-16 | 3.2 | 3.56 | — | 3.5 | 0.009 | 0.98 | 0.0 | 0.05 | 18.89 | 0.01 | 1.590 | 13.93 | 5.83 | 8.4 | 91.5 | 0.1 | -1.33 | 0.79 | 0.83 | 2.21 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 18.54 | 0.00 | 2.087 | 9.55 | 0.06 | 6.3 | 93.6 | 0.1 | -0.16 | 1.35 | 0.80 | 0.85 | 2.29 | 17162 | 1978 | 15 | 70 | 10 | 0 | 0 | logfile |
✔ | 7oE3 | 12860 | 2023-08-12 | 2021-05-01 | 3.35 | 4.05 | 3.43 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 15.39 | 0.00 | 2.179 | 5.99 | 3.39 | 8.2 | 91.8 | 0.0 | -2.02 | 0.92 | 0.87 | 2.22 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 16.07 | 0.00 | 2.102 | 7.34 | 0.22 | 8.0 | 92.0 | 0.0 | 0.32 | 0.41 | 0.93 | 0.90 | 1.77 | 11904 | 1478 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UM6 | 26598 | 2023-08-10 | 2022-04-06 | 2.79 | 2.13 | 2.81 | 1.9 | 0.012 | 0.64 | 0.0 | 0.04 | 11.16 | 0.00 | 2.359 | 2.38 | 0.12 | 3.8 | 96.2 | 0.0 | -0.54 | 0.82 | 0.81 | 4.30 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 14.17 | 0.00 | 2.248 | 4.01 | 1.81 | 2.8 | 97.2 | 0.0 | 0.66 | 0.38 | 0.83 | 0.83 | 3.39 | 8175 | 1094 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7SP8 | 25368 | 2023-08-10 | 2021-11-02 | 2.7 | 2.98 | — | 2.9 | 0.008 | 0.77 | 0.0 | 0.05 | 14.24 | 0.00 | 2.204 | 5.45 | 0.16 | 1.5 | 98.5 | 0.0 | 2.53 | 0.72 | 0.82 | 2.37 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.97 | 0.00 | 1.936 | 8.01 | 1.90 | 1.2 | 98.8 | 0.0 | 1.82 | 0.62 | 0.75 | 0.88 | 3.41 | 6090 | 742 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6oKT | 20104 | 2023-08-19 | 2019-04-15 | 4.2 | 4.31 | — | 4.2 | 0.007 | 0.96 | 0.0 | 0.06 | 15.35 | 0.01 | 2.188 | 7.94 | 1.60 | 11.9 | 88.1 | 0.0 | -4.31 | 0.73 | 0.81 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 13.62 | 0.00 | 2.123 | 10.59 | 0.00 | 7.9 | 92.1 | 0.0 | -2.29 | 0.58 | 0.73 | 0.80 | — | 27048 | 3451 | 7 | 0 | 0 | 0 | 0 | logfile |